Glycolysis and gluconeogenesis (Danio rerio)

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ArcPathVisio Brace Ellipse EndoplasmicReticulum GolgiApparatus HexagonPathVisio MimDegradation Mitochondria Octagon PentagonPathVisio Rectangle RoundedRectangle SarcoplasmicReticulum TriangleEquilateralEast TrianglePathVisio none TCA cycleCytosolGluconeogenesisGlycolysisMitochondrionPyruvic acid3-Phosphoglyceric acidGlucose-6-phosphateMalateGlucoseFructose-6-phosphategot1zgc:64133PhosphoenolpyruvatePyruvic acidOxalacetic acidFructose-1,6-biphosphateGlyceric acid 1,3-biphosphate2-Phosphoglyceric acidDihydroxyacetone Phosphatepcpck1Lactatetpi1bL-Aspartic acidMalateim:6895556mdh1bOxalacetic acidAcetyl-CoAL-Aspartic acidGlyceraldehyde-3-phosphateGPIaGPIbGOT2aGOT2bdldhPDHA2dlatpdhbzgc:66110PDHA1aPDHA1bpkm2apkm2bpklrldhaLDHBLDHCLDHAL6BaldobaldocaldoclFBP1afbp2FBP1bENO1Beno3eno2eno1PFKMaLOC570106PFKPaPFKMbPFKPbPGAM1apgam2PGAM1bgapdhGAPDgapdhshk2hk1gckHK3pgk1PGK2Name: Glycolysis and GluconeogenesisLast Modified: 10/17/2013Organism: Danio rerio


Description

No description

Comments

HomologyConvert 
This pathway was inferred from Homo sapiens pathway WP534(r28564) with a 54% conversion rate.

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Quality Tags

Image:MissingDescription.pngAdd description
Image:Curated.pngReview changes for Approved
Image:MissingXref.pngAnnotate nodes

Ontology Terms

Pathway Ontology : glycine metabolic pathway
 

Bibliography

  1. Kumar MG, Rowley S, Fulton R, Dinday MT, Baraban SC, Patel M; ''Altered Glycolysis and Mitochondrial Respiration in a Zebrafish Model of Dravet Syndrome.''; eNeuro, 2016 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
116884
Approved
view11:05, 15 May 2021EweitzModified title
106076view11:58, 16 August 2019MaintBotHMDB identifier normalization
96497view06:44, 16 March 2018EgonwReplaced a secondary ChEBI identifier with a primary identifier.
96488view20:49, 15 March 2018AlexanderPicoUpdated elements and add content from paper (Kumar 2016)
91936view09:24, 6 April 2017LWackersAdded annotations for some genes that were missing them. A number were split into A and B subunits with seperate Ensembl identifiers.
87573view02:20, 25 July 2016AlexanderPicoOntology Term : 'classic metabolic pathway' added !
87572view02:20, 25 July 2016AlexanderPicoOntology Term : 'glycolysis pathway' added !
71518view19:22, 17 October 2013MaintBotAutomated update of data sources
68649view05:03, 6 July 2013MaintBotUpdated to 2013 gpml schema
62790view16:32, 2 May 2013MaintBotUpdated UniProt data source
40817view22:17, 1 March 2011MaintBotRemoved redundant pathway information and comments
34205view21:30, 9 December 2009MaintBotAutomatic update of empty xrefs
32330view13:28, 15 August 2009MaintBotFixed text labels
31939view12:57, 14 August 2009MaintBotFixed group labels
31369view20:37, 13 August 2009MaintBotFixed text labels
31067view01:28, 30 July 2009MaintBotNew pathway

External references

DataNodes

View all...
Name  ↓Type  ↓Database reference  ↓Comment  ↓
2-Phosphoglyceric acidMetaboliteHMDB00362 (HMDB)
3-Phosphoglyceric acidMetaboliteHMDB00807 (HMDB)
Acetyl-CoAMetabolite
Dihydroxyacetone PhosphateMetabolite
ENO1BGeneProduct
FBP1aGeneProductENSDARG00000021366 (Ensembl)
FBP1bGeneProductENSDARG00000020364 (Ensembl)
Fructose-1,6-biphosphateMetaboliteHMDB01058 (HMDB)
Fructose-6-phosphateMetabolite
GAPDGeneProduct
GOT2aGeneProductENSDARG00000041068 (Ensembl)
GOT2bGeneProductENSDARG00000005840 (Ensembl)
GPIaGeneProductENSDARG00000012987 (Ensembl)
GPIbGeneProductENSDARG00000103826 (Ensembl)
GlucoseMetabolite
Glucose-6-phosphateMetabolite
Glyceraldehyde-3-phosphateMetabolite
Glyceric acid 1,3-biphosphateMetaboliteHMDB01270 (HMDB)
HK3GeneProduct
L-Aspartic acidMetaboliteHMDB00191 (HMDB)
LDHAL6BGeneProduct
LDHBGeneProduct30497 (Entrez Gene)
LDHCGeneProduct
LOC570106GeneProduct570106 (Entrez Gene)
LactateMetabolite
MalateMetabolite
Oxalacetic acidMetaboliteHMDB00223 (HMDB)
PDHA1aGeneProductENSDARG00000012387 (Ensembl)
PDHA1bGeneProductENSDARG00000010555 (Ensembl)
PDHA2GeneProduct
PFKMaGeneProductENSDARG00000014179 (Ensembl)
PFKMbGeneProductENSDARG00000060797 (Ensembl)
PFKPaGeneProductENSDARG00000028000 (Ensembl)
PFKPbGeneProductENSDARG00000012801 (Ensembl)
PGAM1aGeneProductENSDARG00000005423 (Ensembl)
PGAM1bGeneProductENSDARG00000014068 (Ensembl)
PGK2GeneProduct
PhosphoenolpyruvateMetabolite
Pyruvic acidMetaboliteHMDB00243 (HMDB)
aldobGeneProduct321664 (Entrez Gene)
aldocGeneProduct369193 (Entrez Gene)
aldoclGeneProduct792692 (Entrez Gene)
dlatGeneProduct324201 (Entrez Gene)
dldhGeneProduct399479 (Entrez Gene)
eno1GeneProduct334116 (Entrez Gene)
eno2GeneProduct402874 (Entrez Gene)
eno3GeneProduct378963 (Entrez Gene)
fbp2GeneProduct445505 (Entrez Gene)
gapdhGeneProduct317743 (Entrez Gene)
gapdhsGeneProduct406367 (Entrez Gene)
gckGeneProduct751668 (Entrez Gene)
got1GeneProduct406330 (Entrez Gene)
hk1GeneProduct406791 (Entrez Gene)
hk2GeneProduct406339 (Entrez Gene)
im:6895556GeneProduct563180 (Entrez Gene)
ldhaGeneProduct30496 (Entrez Gene)
mdh1bGeneProduct335715 (Entrez Gene)
pcGeneProduct58068 (Entrez Gene)
pck1GeneProduct378727 (Entrez Gene)
pdhbGeneProduct406428 (Entrez Gene)
pgam2GeneProduct572733 (Entrez Gene)
pgk1GeneProduct406696 (Entrez Gene)
pklrGeneProduct114551 (Entrez Gene)
pkm2aGeneProduct335817 (Entrez Gene)
pkm2bGeneProductENSDARG00000099860 (Ensembl)
tpi1bGeneProduct560753 (Entrez Gene)
zgc:64133GeneProduct406405 (Entrez Gene)
zgc:66110GeneProduct393532 (Entrez Gene)

Annotated Interactions

No annotated interactions
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