lncRNA in canonical Wnt signaling and colorectal cancer (Homo sapiens)

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Revision as of 21:42, 30 April 2018 by Khanspers (Talk | contribs)
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ArcPathVisio Brace Ellipse EndoplasmicReticulum GolgiApparatus HexagonPathVisio MimDegradation Mitochondria Octagon PentagonPathVisio Rectangle RoundedRectangle SarcoplasmicReticulum TriangleEquilateralEast TrianglePathVisio none ScaffoldAPC2LegendNucleusTranscriptional ActivationCytoplasmProliferationMigration, invasionStem cell maintenanceActivating mutationWnt target genesPLAUCCND1JUNCCND3FOSL1MYCCCND2RUVBL1CSNK1ECDK6MAPK SignalingMIR34APPPCTNNB1Cell cycle progressionKREM1CCALMAP3K7RBM5-AS1CHD8CDK826S Proteasome Degradationlnc34ATFAP2AATF3ROR1RYKROR2GSK3BAPCAXIN1CSNK2BCSNK2A1CSNK2A3CSNK2A2FRAT1FRAT2PPLEF1TCF7L1PPTCF7L2TCF7CTNNB1TCF3ASBELWNT3AWNT7AWNT11WNT1WNT5BWNT2WNT2BWNT6WNT5AWNT16WNT4WNT3WNT10BWNT7BWNT10AWNT16H2AFY2H19EZH2H19CSNK1A1CSNK1A1LDVL3DVL2DVL1FZD3FZD8LRP5FZD10FZD7FZD4FZD1LRP6FZD6FZD5FZD9FZD2HNRNPKMYUCTNNB1DKK1DKK2DKK4SOSTSERPINF1SFRP1SFRP2SFRP4SFRP5NOTUMCER1WIF1PORCNNKD1NKD2CXXC4SENP2PNLKCTNNBIP1SOX17CTBP1CTBP2MIR16-2MIR16-1NKD1HNRNPUH19Inactivating mutationlncRNAmiRNAAXIN2Name: LncRNA involvement in canonical Wnt signaling and colorectal cancerOrganism: Homo sapiens


Description

Recently, long non-coding RNAs (lncRNAs) have emerged as significant players in CRC pathogenesis through diversified mechanisms. This pathway represents a review of long non-coding RNA (LncRNA) involvement in canonical Wnt signaling as it relates to colorectal cancer. Core pathway is adapted from http://www.genome.jp/kegg-bin/show_pathway?hsa04310.

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Quality Tags

Image:Curated.pngReview changes for Approved
Image:PLoS_OpenAccess.pngOpen Access
Image:Wplogo_31.pngCommunity: CPTAC
Image:MissingXref.pngAnnotate nodes

Ontology Terms

Bibliography

  1. Shen P, Pichler M, Chen M, Calin GA, Ling H; ''To Wnt or Lose: The Missing Non-Coding Linc in Colorectal Cancer.''; Int J Mol Sci, 2017 PubMed Europe PMC Scholia
  2. Hornbeck PV, Zhang B, Murray B, Kornhauser JM, Latham V, Skrzypek E; ''PhosphoSitePlus, 2014: mutations, PTMs and recalibrations.''; Nucleic Acids Res, 2015 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
137066
Approved
view23:52, 26 February 2025KhanspersModified description
127462view01:12, 7 October 2023Khanspersupdated phospho sites
127400view21:41, 29 September 2023Khanspersupdated phospho sites
127239view00:16, 26 August 2023Khanspersadded lit ref and updated description
123417
CPTAC
view06:11, 26 July 2022EgonwMade three pathways clickable
117770view13:31, 22 May 2021EweitzModified title
108136view10:32, 29 November 2019FehrhartOntology Term : 'colorectal cancer' added !
108135view10:31, 29 November 2019FehrhartOntology Term : 'cancer pathway' added !
106508view20:40, 5 September 2019KhanspersModified description
105487view05:44, 8 August 2019KhanspersModified description
105471view05:18, 8 August 2019KhanspersModified description
97136view21:42, 30 April 2018Khanspersconnected missing interaction
96917view15:43, 19 April 2018Khanspersfixed broken interaction
96905view19:14, 18 April 2018KhanspersModified description
96904view18:52, 18 April 2018Khanspersfixed broken interaction
96890view05:35, 18 April 2018KhanspersModified description
96889view05:34, 18 April 2018Khansperschanged scaffold location
96888view05:33, 18 April 2018KhanspersOntology Term : 'disease pathway' added !
96887view05:33, 18 April 2018KhanspersOntology Term : 'Wnt signaling, canonical pathway' added !
96886view05:32, 18 April 2018KhanspersOntology Term : 'colorectal cancer pathway' added !
96885view05:31, 18 April 2018KhanspersModified title
96884view05:31, 18 April 2018KhanspersNew pathway

External references

DataNodes

View all...
Name  ↓Type  ↓Database reference  ↓Comment  ↓
26S Proteasome DegradationPathwayWP183 (WikiPathways)
APC2GeneProductENSG00000115266 (Ensembl)
APCGeneProduct324 (Entrez Gene)
ASBELGeneProduct
ATF3GeneProductENSG00000162772 (Ensembl)
AXIN1GeneProduct8312 (Entrez Gene)
AXIN2GeneProductENSG00000168646 (Ensembl)
CCALGeneProduct
CCND1GeneProduct595 (Entrez Gene)
CCND2GeneProduct894 (Entrez Gene)
CCND3GeneProduct896 (Entrez Gene)
CDK6GeneProductENSG00000105810 (Ensembl)
CDK8GeneProductENSG00000132964 (Ensembl)
CER1GeneProductENSG00000147869 (Ensembl)
CHD8GeneProductENSG00000100888 (Ensembl)
CSNK1A1GeneProductENSG00000113712 (Ensembl)
CSNK1A1LGeneProductENSG00000180138 (Ensembl)
CSNK1EGeneProduct1454 (Entrez Gene)
CSNK2A1GeneProductENSG00000101266 (Ensembl)
CSNK2A2GeneProductENSG00000070770 (Ensembl)
CSNK2A3GeneProductENSG00000254598 (Ensembl)
CSNK2BGeneProductENSG00000204435 (Ensembl)
CTBP1GeneProductENSG00000159692 (Ensembl)
CTBP2GeneProductENSG00000175029 (Ensembl)
CTNNB1GeneProduct1499 (Entrez Gene)
CTNNBIP1GeneProductENSG00000178585 (Ensembl)
CXXC4GeneProductENSG00000168772 (Ensembl)
Cell cycle progressionPathwayWP179 (WikiPathways)
DKK1GeneProductENSG00000107984 (Ensembl)
DKK2GeneProductENSG00000155011 (Ensembl)
DKK4GeneProductENSG00000104371 (Ensembl)
DVL1GeneProduct1855 (Entrez Gene)
DVL2GeneProduct1856 (Entrez Gene)
DVL3GeneProduct1857 (Entrez Gene)
EZH2GeneProductENSG00000106462 (Ensembl)
FOSL1GeneProduct8061 (Entrez Gene)
FRAT1GeneProduct10023 (Entrez Gene)
FRAT2GeneProductENSG00000181274 (Ensembl)
FZD10GeneProduct11211 (Entrez Gene)
FZD1GeneProduct8321 (Entrez Gene)
FZD2GeneProduct2535 (Entrez Gene)
FZD3GeneProduct7976 (Entrez Gene)
FZD4GeneProduct6424 (Entrez Gene)
FZD5GeneProduct7855 (Entrez Gene)
FZD6GeneProduct8323 (Entrez Gene)
FZD7GeneProduct8324 (Entrez Gene)
FZD8GeneProduct8325 (Entrez Gene)
FZD9GeneProduct8326 (Entrez Gene)
GSK3BGeneProduct2932 (Entrez Gene) MOUSE:KG38 MOUSE
H19GeneProductENSG00000130600 (Ensembl)
H2AFY2GeneProductENSG00000099284 (Ensembl)
HNRNPKGeneProductENSG00000165119 (Ensembl)
HNRNPUGeneProductENSG00000153187 (Ensembl)
JUNGeneProduct3725 (Entrez Gene)
KREM1GeneProduct83999 (Entrez Gene)
LEF1GeneProductENSG00000138795 (Ensembl)
LRP5GeneProduct4041 (Entrez Gene)
LRP6GeneProduct4040 (Entrez Gene)
MAP3K7GeneProductENSG00000135341 (Ensembl)
MAPK SignalingPathwayWP382 (WikiPathways)
MIR16-1GeneProductENSG00000208006 (Ensembl)
MIR16-2GeneProductENSG00000198987 (Ensembl)
MIR34AGeneProductENSG00000228526 (Ensembl)
MYCGeneProduct4609 (Entrez Gene)
MYUGeneProduct
NKD1GeneProductENSG00000140807 (Ensembl)
NKD2GeneProductENSG00000145506 (Ensembl)
NLKGeneProductENSG00000087095 (Ensembl)
NOTUMGeneProductENSG00000185269 (Ensembl)
PLAUGeneProduct5328 (Entrez Gene)
PORCNGeneProductENSG00000102312 (Ensembl)
RBM5-AS1GeneProduct
ROR1GeneProduct4919 (Entrez Gene)
ROR2GeneProduct4920 (Entrez Gene)
RUVBL1GeneProductENSG00000175792 (Ensembl)
RYKGeneProduct6259 (Entrez Gene)
SENP2GeneProductENSG00000163904 (Ensembl)
SERPINF1GeneProductENSG00000132386 (Ensembl)
SFRP1GeneProductENSG00000104332 (Ensembl)
SFRP2GeneProductENSG00000145423 (Ensembl)
SFRP4GeneProductENSG00000106483 (Ensembl)
SFRP5GeneProductENSG00000120057 (Ensembl)
SOSTGeneProductENSG00000167941 (Ensembl)
SOX17GeneProductENSG00000164736 (Ensembl)
TCF3GeneProductENSG00000071564 (Ensembl)
TCF7GeneProductENSG00000081059 (Ensembl)
TCF7L1GeneProductENSG00000152284 (Ensembl)
TCF7L2GeneProductENSG00000148737 (Ensembl)
TFAP2AGeneProductENSG00000137203 (Ensembl)
WIF1GeneProductENSG00000156076 (Ensembl)
WNT10AGeneProduct80326 (Entrez Gene)
WNT10BGeneProduct7480 (Entrez Gene)
WNT11GeneProduct7481 (Entrez Gene)
WNT16GeneProduct51384 (Entrez Gene)
WNT1GeneProduct7471 (Entrez Gene)
WNT2GeneProduct7472 (Entrez Gene)
WNT2BGeneProduct7482 (Entrez Gene)
WNT3GeneProduct7473 (Entrez Gene)
WNT3AGeneProduct89780 (Entrez Gene)
WNT4GeneProduct54361 (Entrez Gene)
WNT5AGeneProduct7474 (Entrez Gene)
WNT5BGeneProduct81029 (Entrez Gene)
WNT6GeneProduct7475 (Entrez Gene)
WNT7AGeneProduct7476 (Entrez Gene)
WNT7BGeneProduct7477 (Entrez Gene)
lnc34AGeneProduct

Annotated Interactions

No annotated interactions

Retrieved from "https://classic.wikipathways.org/index.php/Pathway:WP4258"
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