miR-targeted genes in squamous cell (Homo sapiens)

From WikiPathways

Revision as of 06:46, 24 August 2018 by Egonw (Talk | contribs)
Jump to: navigation, search
NPCHMP2APOM121PXDNOPRS1HES1 GALNT1MRPL20SEC23AANXA2PPP1R7MTPN KDELC2PICALMFGF2ARCN1GALNT7DNAJB1NF2TPM3VCAM1PKM2MTPN NRASRAI14PWP1POLR2CANPEPTMEM59TMED7MTPN NPSPCS3TBCASLC38A1TRAM1TMED10AP3D1MIRLET7BATRXATP6V1C1ANPEPGOLGA7GALNT7ATP2A2DHX57RHEBATP6V0ETPM1PTMAFBXW1BMETRARSACAA2LAMC1HNRPMRTN4FNDC3BPOM121UBE2V1COMMD9ARFIP1NCLMIR370TPM3ADIPOR2 UBE2J1ANP32BNRP1HMGA1SRPRBCBFBLAMC1TNFRSF10BAXLLAMC1CPNE8HBXIPSLC12A2TMED2ELOVL5FNDC3ACBFBGAS2L1THBS1TPM1SMAD1FMNL2SH3BP4NPAP2A1METMETTHBS1 ATP6V1FMAP3K8GYS1SMAD1IDH1MRPS33PDLIM7HOXA7P4HA2POLD2MRC2SLC4A10PDCD4VEZT / vezatinSDCBPHMOX1NEDD4BET1MIR126HSD17B12tuba3TICAM2SFRS9MIR20ASH3BGRL3TMEM43PRPF40ARAB34GNAI2CTDSP1 MIR375THBS1METTGFBR2GFPT1SYNE2ARF4MPZL1DNAJB1SPTLC1FAM96ASLC38A1AKAP8PISDMAGT1PICALMMOV10SLC38A2DHX40TXNRD1YWHAQADARPODXLPKM2E2F3CUL4BMIRLET7BMIRLET7A1MIRLET7A2MIRLET7A3MIR155MIR16-1MIR16-2MIR1-1MIR1-2MIR30AMIR30BMIR30C1MIR30AMIR30C2MIR30DMIR30EMIR103A1MIR124-1MIR124-2MIR124-3MIR21MIR23AMIR23BMIR26A1MIR26A2MIR29CMIR30AMIR34AMIR199A1MIR199A2MIR196A1MIR196A2MIR196BMIR133BMIR133A1MIR133A2MIR124-1MIR124-2MIR124-3


Description

This catalogue pathway was created using the database from "http://diana.cslab.ece.ntua.gr/tarbase/" with exclusions based on evidance type. This pathway only incldes miR targeted genes expressed in Muscle cells. This pathway is meant for data mapping.

Try the New WikiPathways

View approved pathways at the new wikipathways.org.

Quality Tags

Ontology Terms

 

Bibliography

  1. Skoufos G, Kakoulidis P, Tastsoglou S, Zacharopoulou E, Kotsira V, Miliotis M, Mavromati G, Grigoriadis D, Zioga M, Velli A, Koutou I, Karagkouni D, Stavropoulos S, Kardaras FS, Lifousi A, Vavalou E, Ovsepian A, Skoulakis A, Tasoulis SK, Georgakopoulos SV, Plagianakos VP, Hatzigeorgiou AG; ''TarBase-v9.0 extends experimentally supported miRNA-gene interactions to cell-types and virally encoded miRNAs.''; Nucleic Acids Res, 2024 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
135703view16:34, 27 October 2024EweitzAdd literature reference
116534view12:06, 7 May 2021EweitzModified title
103016view15:31, 31 January 2019Marvin M2Updated miRNA ID of MIRLET7B
102159view19:34, 4 December 2018Khanspersupdated xrefs for miRNAs
98365view06:46, 24 August 2018EgonwUpdated the MIR21 identifier.
88592view19:39, 11 August 2016Mkutmonfix unconnected lines
82899view13:50, 11 November 2015JmeliusCorrect outdated id
79984view15:44, 29 April 2015ZariCorrected Ensembl ID for MRPL20 and PISD genes
78523view10:29, 7 January 2015MaintBotadded missing graphIds
75320view21:28, 16 May 2014KhanspersmiRNA xrefs and layout
69040view17:52, 8 July 2013MaintBotUpdated to 2013 gpml schema
64825view21:17, 3 June 2013MaintBotModified title
59220view20:13, 22 February 2013MaintBotUpdated Ensembl and UniProt data source
57856view18:36, 4 February 2013MaintBotOntology Term : 'miRNA pathway' added !
44276view18:12, 30 August 2011MaintBotModified categories
44275view18:12, 30 August 2011MaintBotModified description
43665view17:35, 13 July 2011Samuel SklarNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
ACAA2GeneProductENSG00000167315 (Ensembl)
ADARGeneProductENSG00000160710 (Ensembl)
ADIPOR2 GeneProductENSG00000006831 (Ensembl)
AKAP8GeneProductENSG00000105127 (Ensembl)
ANP32BGeneProductENSG00000136938 (Ensembl)
ANPEPGeneProductENSG00000166825 (Ensembl)
ANXA2GeneProductENSG00000182718 (Ensembl)
AP2A1GeneProductENSG00000196961 (Ensembl)
AP3D1GeneProductENSG00000065000 (Ensembl)
ARCN1GeneProductENSG00000095139 (Ensembl)
ARF4GeneProductENSG00000168374 (Ensembl)
ARFIP1GeneProductENSG00000164144 (Ensembl)
ATP2A2GeneProductENSG00000174437 (Ensembl)
ATP6V0EGeneProductENSG00000113732 (Ensembl)
ATP6V1C1GeneProductENSG00000155097 (Ensembl)
ATP6V1FGeneProductENSG00000128524 (Ensembl)
ATRXGeneProductENSG00000085224 (Ensembl)
AXLGeneProductENSG00000167601 (Ensembl)
BET1GeneProductENSG00000105829 (Ensembl)
CBFBGeneProductENSG00000067955 (Ensembl)
CHMP2AGeneProductENSG00000130724 (Ensembl)
COMMD9GeneProductENSG00000110442 (Ensembl)
CPNE8GeneProductENSG00000139117 (Ensembl)
CTDSP1 GeneProductENSG00000144579 (Ensembl)
CUL4BGeneProductENSG00000158290 (Ensembl)
DHX40GeneProductENSG00000108406 (Ensembl)
DHX57GeneProductENSG00000163214 (Ensembl)
DNAJB1GeneProductENSG00000132002 (Ensembl)
E2F3GeneProductENSG00000112242 (Ensembl)
ELOVL5GeneProductENSG00000012660 (Ensembl)
FAM96AGeneProductENSG00000166797 (Ensembl)
FBXW1BGeneProductENSG00000072803 (Ensembl)
FGF2GeneProductENSG00000138685 (Ensembl)
FMNL2GeneProductENSG00000157827 (Ensembl)
FNDC3AGeneProductENSG00000102531 (Ensembl)
FNDC3BGeneProductENSG00000075420 (Ensembl)
GALNT1GeneProductENSG00000141429 (Ensembl)
GALNT7GeneProductENSG00000109586 (Ensembl)
GAS2L1GeneProductENSG00000185340 (Ensembl)
GFPT1GeneProductENSG00000198380 (Ensembl)
GNAI2GeneProductENSG00000114353 (Ensembl)
GOLGA7GeneProductENSG00000147533 (Ensembl)
GYS1GeneProductENSG00000104812 (Ensembl)
HBXIPGeneProductENSG00000134248 (Ensembl)
HES1 GeneProductENSG00000114315 (Ensembl)
HMGA1GeneProductENSG00000137309 (Ensembl)
HMOX1GeneProductENSG00000100292 (Ensembl)
HNRPMGeneProductENSG00000099783 (Ensembl)
HOXA7GeneProductENSG00000122592 (Ensembl)
HSD17B12GeneProductENSG00000149084 (Ensembl)
IDH1GeneProductENSG00000138413 (Ensembl)
KDELC2GeneProductENSG00000178202 (Ensembl)
LAMC1GeneProductENSG00000135862 (Ensembl)
MAGT1GeneProductENSG00000102158 (Ensembl)
MAP3K8GeneProductENSG00000107968 (Ensembl)
METGeneProductENSG00000105976 (Ensembl)
MIR1-1Rna406904 (Entrez Gene)
MIR1-2RnaENSG00000278753 (Ensembl)
MIR103A1RnaENSG00000199035 (Ensembl)
MIR124-1RnaENSG00000275677 (Ensembl)
MIR124-2RnaENSG00000207816 (Ensembl)
MIR124-3RnaENSG00000207598 (Ensembl)
MIR126RnaENSG00000199161 (Ensembl)
MIR133A1RnaENSG00000276792 (Ensembl)
MIR133A2RnaENSG00000207764 (Ensembl)
MIR133BRnaENSG00000199080 (Ensembl)
MIR155RnaENSG00000275402 (Ensembl)
MIR16-1RnaENSG00000208006 (Ensembl)
MIR16-2RnaENSG00000198987 (Ensembl)
MIR196A1Rna406972 (Entrez Gene)
MIR196A2Rna406973 (Entrez Gene)
MIR196BRna442920 (Entrez Gene)
MIR199A1RnaENSG00000207752 (Ensembl)
MIR199A2RnaENSG00000208024 (Ensembl)
MIR20ARnaENSG00000275534 (Ensembl)
MIR21RnaENSG00000284190 (Ensembl)
MIR23ARnaENSG00000207980 (Ensembl)
MIR23BRnaENSG00000207563 (Ensembl)
MIR26A1RnaENSG00000199075 (Ensembl)
MIR26A2RnaENSG00000207789 (Ensembl)
MIR29CRnaENSG00000275668 (Ensembl)
MIR30ARnaENSG00000207827 (Ensembl)
MIR30BRnaENSG00000207582 (Ensembl)
MIR30C1RnaENSG00000207962 (Ensembl)
MIR30C2RnaENSG00000199094 (Ensembl)
MIR30DRnaENSG00000199153 (Ensembl)
MIR30ERnaENSG00000198974 (Ensembl)
MIR34ARnaENSG00000207865 (Ensembl)
MIR370RnaENSG00000199005 (Ensembl)
MIR375RnaENSG00000198973 (Ensembl)
MIRLET7A1RnaENSG00000199165 (Ensembl)
MIRLET7A2RnaENSG00000198975 (Ensembl)
MIRLET7A3RnaENSG00000198986 (Ensembl)
MIRLET7BRnaENSG00000207875 (Ensembl)
MOV10GeneProductENSG00000155363 (Ensembl)
MPZL1GeneProductENSG00000197965 (Ensembl)
MRC2GeneProductENSG00000011028 (Ensembl)
MRPL20GeneProductENSG00000242485 (Ensembl)
MRPS33GeneProductENSG00000090263 (Ensembl)
MTPN GeneProductENSG00000105887 (Ensembl)
NCLGeneProductENSG00000115053 (Ensembl)
NEDD4GeneProductENSG00000069869 (Ensembl)
NF2GeneProductENSG00000186575 (Ensembl)
NPGeneProductENSG00000198805 (Ensembl)
NRASGeneProductENSG00000009307 (Ensembl)
NRP1GeneProductENSG00000099250 (Ensembl)
OPRS1GeneProductENSG00000147955 (Ensembl)
P4HA2GeneProductENSG00000072682 (Ensembl)
PDCD4GeneProductENSG00000150593 (Ensembl)
PDLIM7GeneProductENSG00000196923 (Ensembl)
PICALMGeneProductENSG00000073921 (Ensembl)
PISDGeneProductENSG00000241878 (Ensembl)
PKM2GeneProductENSG00000067225 (Ensembl)
PODXLGeneProductENSG00000128567 (Ensembl)
POLD2GeneProductENSG00000106628 (Ensembl)
POLR2CGeneProductENSG00000102978 (Ensembl)
POM121GeneProductENSG00000196313 (Ensembl)
PPP1R7GeneProductENSG00000115685 (Ensembl)
PRPF40AGeneProductENSG00000196504 (Ensembl)
PTMAGeneProductENSG00000187514 (Ensembl)
PWP1GeneProductENSG00000136045 (Ensembl)
PXDNGeneProductENSG00000130508 (Ensembl)
RAB34GeneProductENSG00000109113 (Ensembl)
RAI14GeneProductENSG00000039560 (Ensembl)
RARSGeneProductENSG00000113643 (Ensembl)
RHEBGeneProductENSG00000106615 (Ensembl)
RTN4GeneProductENSG00000115310 (Ensembl)
SDCBPGeneProductENSG00000137575 (Ensembl)
SEC23AGeneProductENSG00000100934 (Ensembl)
SFRS9GeneProductENSG00000111786 (Ensembl)
SH3BGRL3GeneProductENSG00000142669 (Ensembl)
SH3BP4GeneProductENSG00000130147 (Ensembl)
SLC12A2GeneProductENSG00000064651 (Ensembl)
SLC38A1GeneProductENSG00000111371 (Ensembl)
SLC38A2GeneProductENSG00000134294 (Ensembl)
SLC4A10GeneProductENSG00000144290 (Ensembl)
SMAD1GeneProductENSG00000170365 (Ensembl)
SPCS3GeneProductENSG00000129128 (Ensembl)
SPTLC1GeneProductENSG00000090054 (Ensembl)
SRPRBGeneProductENSG00000144867 (Ensembl)
SYNE2GeneProductENSG00000054654 (Ensembl)
TBCAGeneProductENSG00000171530 (Ensembl)
TGFBR2GeneProductENSG00000163513 (Ensembl)
THBS1 GeneProductENSG00000137801 (Ensembl)
THBS1GeneProductENSG00000137801 (Ensembl)
TICAM2GeneProductENSG00000134970 (Ensembl)
TMED10GeneProductENSG00000170348 (Ensembl)
TMED2GeneProductENSG00000086598 (Ensembl)
TMED7GeneProductENSG00000134970 (Ensembl)
TMEM43GeneProductENSG00000170876 (Ensembl)
TMEM59GeneProductENSG00000116209 (Ensembl)
TNFRSF10BGeneProductENSG00000120889 (Ensembl)
TPM1GeneProductENSG00000140416 (Ensembl)
TPM3GeneProductENSG00000143549 (Ensembl)
TRAM1GeneProductENSG00000067167 (Ensembl)
TXNRD1GeneProductENSG00000198431 (Ensembl)
UBE2J1GeneProductENSG00000198833 (Ensembl)
UBE2V1GeneProductENSG00000124208 (Ensembl)
VCAM1GeneProductENSG00000162692 (Ensembl)
VEZT / vezatinGeneProductENSG00000028203 (Ensembl)
YWHAQGeneProductENSG00000134308 (Ensembl)
tuba3GeneProductENSG00000167552 (Ensembl)

Annotated Interactions

No annotated interactions

Retrieved from "https://classic.wikipathways.org/index.php/Pathway:WP2006"
Personal tools