Urea cycle and metabolism of amino groups (Bos taurus)

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Description

The urea cycle (also known as the ornithine cycle) is a cycle of biochemical reactions that produces urea ((NH2)2CO) from ammonia (NH3). This cycle occurs in ureotelic organisms. The urea cycle converts highly toxic ammonia to urea for excretion. This cycle was the first metabolic cycle to be discovered (Hans Krebs and Kurt Henseleit, 1932), five years before the discovery of the TCA cycle. The urea cycle takes place primarily in the liver and, to a lesser extent, in the kidneys. Amino acid catabolism results in waste ammonia. All animals need a way to excrete this product. Most aquatic organisms, or ammonotelic organisms, excrete ammonia without converting it. Ammonia is toxic, but upon excretion from aquatic species, it is diluted by the water outside the organism. Organisms that cannot easily and safely remove nitrogen as ammonia convert it to a less toxic substance such as urea or uric acid. The urea cycle mainly occurs in the liver. The urea produced by the liver is then released into the bloodstream where it travels to the kidneys and is ultimately excreted in urine.

Comments

HomologyConvert 
This pathway was inferred from Homo sapiens pathway WP497(72142) with a 56.0% conversion rate.

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Quality Tags

Ontology Terms

 

Bibliography

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History

CompareRevisionActionTimeUserComment
140502view11:22, 2 September 2025EgonwCopied the description from the source pathway
140501view11:19, 2 September 2025EgonwMore unicode
123273view15:46, 9 July 2022EgonwMade two pathways clickable
80874view15:29, 30 June 2015MkutmonNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
(S)-1-Pyrroline-5-carboxylateMetaboliteC03912 (KEGG Compound)
1.2.1.38GeneProduct
1.2.1.46GeneProduct
1.5.99.1GeneProduct
2.3.1.35GeneProduct
2.6.1.11GeneProduct
2.6.1.69GeneProduct
2.7.2.8GeneProduct
2.7.3.1GeneProduct
3.5.1.16GeneProduct
3.5.1.5GeneProduct
3.5.1.54GeneProduct
3.5.1.59GeneProduct
3.5.2.10GeneProduct
3.5.2.14GeneProduct
3.5.3.3GeneProduct
3.5.4.21GeneProduct
6.3.4.6GeneProduct
ACY1GeneProductENSBTAG00000032304 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:95
ALDH18A1GeneProductENSBTAG00000011832 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:5832
ARG1GeneProductENSBTAG00000012403 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:383
ARG2GeneProductENSBTAG00000001945 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:384
ASLGeneProductENSBTAG00000015314 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:435
ASS1GeneProductENSBTAG00000020747 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:445
Alanine and aspartate metabolismPathwayWP106 (WikiPathways)
Amino acid metabolismPathway
Arginine metabolismPathway
ArginineMetabolite74-79-3 (CAS) L-Arginine
CKBGeneProductENSBTAG00000035998 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1152
CKMGeneProductENSBTAG00000013921 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1158
CO₂MetaboliteC00011 (KEGG Compound)
CPS1GeneProductENSBTAG00000016662 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:1373
CarbamoylMetaboliteC00169 (KEGG Compound)
Citrate cycle (TCA cycle)PathwayWP78 (WikiPathways)
CreatineMetabolite57-00-1 (CAS) Creatine
CreatinineMetabolite60-27-5 (CAS) Creatinine
D-Arginine and D-Ornithine metabolismPathway
FormaldehydeMetabolite50-00-0 (CAS) Formaldehyde
FormateMetaboliteC00058 (KEGG Compound)
FumarateMetaboliteC00122 (KEGG Compound)
GAMTGeneProductENSBTAG00000004112 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2593
GATMGeneProductENSBTAG00000005586 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2628
GLUD1GeneProductENSBTAG00000007540 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2746
Glutamate metabolismPathway
GuanidinoacetateMetaboliteC00581 (KEGG Compound)
L-AspartateMetaboliteC00049 (KEGG Compound)
L-CitrullineMetabolite372-75-8 (CAS) L-Citrulline
L-Glutamate 5-semialdehydeMetaboliteC01165 (KEGG Compound)
L-GlutamateMetabolite56-86-0 (CAS) L-Glutamate
L-GlutamylMetabolite
L-OrnithineMetabolite70-26-8 (CAS) L-Ornithine
L-ProlineMetabolite147-85-3 (CAS) L-Proline
N-(L-Arginino)succinateMetaboliteC03406 (KEGG Compound)
N-Acetyl-L-glutamateMetaboliteC00624 (KEGG Compound)
N-Acetyl-glutamateMetaboliteC00624 (KEGG Compound)
N-CarbamoylsarcosineMetaboliteC01043 (KEGG Compound)
N-MethylhydantoinMetaboliteC02565 (KEGG Compound)
N2-Acetyl-L-ornithineMetaboliteC00437 (KEGG Compound)
NAGSGeneProductENSBTAG00000016249 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:162417
NH3MetaboliteC00014 (KEGG Compound)
Nitrogen metabolism Pathway
OATGeneProductENSBTAG00000006928 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:4942
ODC1GeneProductENSBTAG00000017924 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:4953
OTCGeneProductENSBTAG00000001488 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:5009
PYCR1GeneProductENSBTAG00000000042 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:5831
PYCRLGeneProductENSBTAG00000016810 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:65263
PhosphoguanidinoacetateMetaboliteC03166 (KEGG Compound)
Proline metabolismPathway
Purine metabolismPathway
PutrescineMetabolite110-60-1 (CAS) Putrescine
Pyrimidine metabolismPathway
SMSGeneProductENSBTAG00000018382 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:6611
SRMGeneProductENSBTAG00000005304 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:6723
SarcosineMetabolite107-97-1 (CAS) Sarcosine
SpermidineMetabolite124-20-9 (CAS) Spermidine
SpermineMetabolite71-44-3 (CAS) Spermine
Urea-1-carboxylateMetaboliteC01010 (KEGG Compound)
UreaMetabolite57-13-6 (CAS) Urea
creatine-PMetabolite57-00-1 (CAS) Phosphocreatine

Annotated Interactions

No annotated interactions