Tryptophan degradation (Saccharomyces cerevisiae)
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Description
While Saccharomyces cerevisiae can use most amino acids as their sole nitrogen source, they can only use a few amino acids as a carbon source to support growth (CITS:[Large86][Cooper82]). This is in contrast to most eukaryotes and some fungi, which can metabolize amino acids completely, utilizing them as sole sources of carbon and nitrogen (CITS:[Stryer88][Large 86]). S. cerevisiae degrade the aromatic amino acids (tryptophan, phenylalanine, and tyrosine) and the branched-chain amino acids (valine, leucine, and iso-leucine) via the Ehrlich pathway (CITS:[Sentheshanmuganathan60][10989420]). This pathway is comprised of the following steps: 1) deamination of the amino acid to the corresponding alpha-keto acid; 2) decarboxylation of the resulting alpha-keto acid to the respective aldehyde; and, 3) reduction of the aldehyde to form the corresponding long chain or complex alcohol, known as a fusel alcohol or fusel oil (CITS:[10989420][Large 86]). Fusel alcohols are important flavor and aroma compounds in yeast-fermented food products and beverages (as reported in (CITS:[9546164]). The primary aminotransferase in tryptophan degradation is postulated to be Aro9p (CITS:[6763508]). In vitro studies demonstrated that Aro9p is active with phenylpyruvate, pyruvate, or p-hydroxyphenylpyruvate, but not 2-oxoglutarate as the amino acceptor (CITS:[6763508]). Aro9p is induced by aromatic amino acids and is subject to nitrogen regulation (CITS:[6763508][10207060]). The decarboxylase encoding gene ARO10 appears to be transcriptionally regulated in a similar fashion(CITS:[10207060]). Gap1p, a general amino acid permease, and Wap1p, an inducible amino acid permease with wide substrate specificity, appear to be the main uptake systems for utilizing aromatic amino acids (CITS:[10207060]).
Source: [SGD pathways](http://pathway.yeastgenome.org/server.html)
Quality Tags
Ontology Terms
Bibliography
- Urrestarazu A, Vissers S, Iraqui I, Grenson M; ''Phenylalanine- and tyrosine-auxotrophic mutants of Saccharomyces cerevisiae impaired in transamination.''; Mol Gen Genet, 1998 PubMed Europe PMC Scholia
- Dickinson JR, Salgado LE, Hewlins MJ; ''The catabolism of amino acids to long chain and complex alcohols in Saccharomyces cerevisiae.''; J Biol Chem, 2003 PubMed Europe PMC Scholia
- Kradolfer P, Niederberger P, Hütter R; ''Tryptophan degradation in Saccharomyces cerevisiae: characterization of two aromatic aminotransferases.''; Arch Microbiol, 1982 PubMed Europe PMC Scholia
- Iraqui I, Vissers S, Cartiaux M, Urrestarazu A; ''Characterisation of Saccharomyces cerevisiae ARO8 and ARO9 genes encoding aromatic aminotransferases I and II reveals a new aminotransferase subfamily.''; Mol Gen Genet, 1998 PubMed Europe PMC Scholia
History
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External references
DataNodes
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Name | Type | Database reference | Comment |
---|---|---|---|
2-oxoglutarate | Metabolite | CHEBI:16810 (ChEBI) ![]() | |
ADH1 | GeneProduct | S000005446 (SGD) ![]() | |
ADH2 | GeneProduct | S000004918 (SGD) ![]() | |
ADH3 | GeneProduct | S000004688 (SGD) ![]() | |
ADH4 | GeneProduct | S000003225 (SGD) ![]() | |
ADH5 | GeneProduct | S000000349 (SGD) ![]() | |
ARO10 | GeneProduct | S000002788 (SGD) ![]() | |
ARO8 | GeneProduct | YGL202W (Ensembl) ![]() | |
ARO9 | GeneProduct | YHR137W (Ensembl) ![]() | |
CO₂ | Metabolite | CHEBI:16526 (ChEBI) ![]() | |
Indole-3-ethanol | Metabolite | CHEBI:17890 (ChEBI) ![]() | |
Indoleacetaldehyde | Metabolite | CHEBI:18086 (ChEBI) ![]() | |
Indolepyruvate | Metabolite | HMDB0060484 (HMDB) ![]() | |
L-glutamate | Metabolite | 56-86-0 (CAS) ![]() | |
L-phenylalanine | Metabolite | 63-91-2 (CAS) ![]() | |
L-tryptophan | Metabolite | 73-22-3 (CAS) ![]() | |
NADH | Metabolite | 53-84-9 (CAS) ![]() | |
NAD | Metabolite | HMDB0000902 (HMDB) ![]() | |
PDC1 | GeneProduct | S000004034 (SGD) ![]() | |
PDC5 | GeneProduct | S000004124 (SGD) ![]() | |
PDC6 | GeneProduct | S000003319 (SGD) ![]() | |
Phenylpyruvate | Metabolite | CHEBI:30851 (ChEBI) ![]() | |
SFA1 | GeneProduct | S000002327 (SGD) ![]() |
Annotated Interactions
No annotated interactions