Help:Finding Pathways

From WikiPathways

(Difference between revisions)
Jump to: navigation, search
Current revision (19:09, 30 August 2021) (view source)
m (Protected "Help:Finding Pathways" [edit=sysop:move=sysop])
 
(21 intermediate revisions not shown.)
Line 1: Line 1:
__NOEDITSECTION__ <!-- Turn off section editing -->
__NOEDITSECTION__ <!-- Turn off section editing -->
-
__NOTOC__ <!-- Turn off Table of Contents -->
 
-
<div class="frontPagePanel blueBg" style="width:90%;margin:1em;width=100%">
+
== Searching ==
-
<h2 class="frontPagePanel blueFg">Finding Pathways</h2>
+
To search for a pathway, type the name of the pathway, a keyword or a gene name in the '''Search''' field in the left-hand navigation panel, or the '''Search''' field on the main page. WikiPathways search is a [http://www.google.com Google] search, so search results will include all pages with a hit for the keyword anywhere in the page. On the search results page you can refine the results based on species.
-
<font size=2>There are many ways to find your pathways of interest. You can:
+
-
* Search by name of the pathway
+
-
* Browse by species
+
-
* Browse by pathway categories
+
-
Additional ways of finding pathways coming soon:
+
-
* Search by gene name
+
-
* Advanced search options, limit by organism or category</font>
+
-
<h4>Searching</h4>
+
-
<font size=2>To search for a pathway, type the name of the pathway in the Search field on the main page. The search field is available in the left-hand navigation panel as well as in the Contents section of the main page. Searching is described in more detail [[:WikiPathways:Searching|here]].
+
-
</font>
+
-
<h4>Browsing</h4>
+
-
<font size=2>You can browse pathways by species or by category.  
+
-
* To browse all pathways for a particular species, go [[:Special:Allpages|Browse Pathways]] and select your species of interest in the drop-down menu. All pathways for the species will be listed in alphabetical order.
+
-
* To browse pathways by functional category, select one of the categories ([[:Category:Cellular Process|Cellular Process]], [[:Category:Metabolic Process|Metabolic Process]], [[:Category:Physiological Process|Physiological Process]] and [[:Category:Molecular Function|Molecular Function]]) in the Contents section of the main page. This gives you a list of pathways from all species in that category.</font>
+
-
<h4>Pathway of the Day</h4>
+
-
<h4>Most Edited Pathways</h4>
+
== Browsing ==
-
<font size=2>WikiPathways keeps track of when pathways are edited. A ranked list displaying which pathways are edited the most is available from the Navigation bar on the main page, under [[:Special:MostEditedPathwaysPage|Most Edited Pathways]].</font>
+
To browse all pathways click the [[:Special:BrowsePathwaysPage|'''Browse''']] thumbnail on the main page or click the '''Browse''' link in the left navigation panel. You can browse by species, or by '''Collection''' (quality tag), or both. Results can be displayed either as thumbnail images or as a list of pathway titles in alphabetical order. Clicking on any pathway title or thumbnail will bring you to the [[:Help:Viewing Pathways|'''Pathway Page''']] for the selected pathway.
-
<h4>Recent Changes</h4>
+
-
<font size=2>WikiPathways keeps track of when pathways are edited. A ranked list displaying which pathways have most recently been edited is available from the Navigation bar on the main page, under [[:Special:Recentchanges|Recent Changes]].</font>
+
-
<font size=2>[[:Help:Contents|Return to Help Contents]]</font>
+
== Pathway of the Day ==
-
</div>
+
The Pathway of the Day is randomly assigned and displayed on the main page. Clicking on the pathway name will bring you to the relevant [[:Help:Viewing Pathways|'''Pathway Page''']].
 +
 
 +
== Most Edited Pathways ==
 +
WikiPathways keeps track of when pathways are edited. A ranked list displaying which pathways are edited the most is available from the navigation panel on the left side of each page, under [[:Special:MostEditedPathwaysPage|'''Most Edited Pathways''']].
 +
 
 +
== Recent Changes ==
 +
WikiPathways keeps track of when pathways are edited. A ranked list displaying which pathways have most recently been edited is available from the navigation panel on the left side of each page, under [[:Special:Recentchanges|'''Recent Changes''']].
 +
 
 +
== New Pathways ==
 +
To view the most recently added pathways, select [[:Special:NewPathwaysPage|'''New Pathways''']] from the navigation panel on the left side of each page.
 +
 
 +
<p>[[:Help:Contents|Return to Help Contents]]</p>
 +
<p>[[:Help:Viewing Pathways|Continue to Viewing Pathways]]</p>

Current revision


Contents

Searching

To search for a pathway, type the name of the pathway, a keyword or a gene name in the Search field in the left-hand navigation panel, or the Search field on the main page. WikiPathways search is a Google search, so search results will include all pages with a hit for the keyword anywhere in the page. On the search results page you can refine the results based on species.

Browsing

To browse all pathways click the Browse thumbnail on the main page or click the Browse link in the left navigation panel. You can browse by species, or by Collection (quality tag), or both. Results can be displayed either as thumbnail images or as a list of pathway titles in alphabetical order. Clicking on any pathway title or thumbnail will bring you to the Pathway Page for the selected pathway.

Pathway of the Day

The Pathway of the Day is randomly assigned and displayed on the main page. Clicking on the pathway name will bring you to the relevant Pathway Page.

Most Edited Pathways

WikiPathways keeps track of when pathways are edited. A ranked list displaying which pathways are edited the most is available from the navigation panel on the left side of each page, under Most Edited Pathways.

Recent Changes

WikiPathways keeps track of when pathways are edited. A ranked list displaying which pathways have most recently been edited is available from the navigation panel on the left side of each page, under Recent Changes.

New Pathways

To view the most recently added pathways, select New Pathways from the navigation panel on the left side of each page.

Return to Help Contents

Continue to Viewing Pathways

Personal tools