testing testing (Anopheles gambiae)

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Revision as of 16:54, 19 December 2012 by Sravanthisinha (Talk | contribs)
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Error rendering pathway page

This revision of the pathway probably contains invalid GPML code. If this happens to the most recent revision, try reverting the pathway using the pathway history displayed below or contact the site administrators (see WikiPathways:About) to resolve this problem.

Pathway history

View all...
CompareRevisionActionTimeUserComment
56321view20:26, 5 January 2013MaintBotDeleted pathway: test
55672view16:54, 19 December 2012Sravanthisinhasd
55671view16:52, 19 December 2012SravanthisinhaSpecify description
55473view15:27, 15 December 2012Applecooldemo
55463view14:36, 15 December 2012Kernelhunter92Specify description
55461view14:31, 15 December 2012Kernelhunter92Specify description
55459view14:19, 15 December 2012Kernelhunter92trial des
55458view14:14, 15 December 2012Applecoolko
55457view14:11, 15 December 2012Kernelhunter92Trial2
55456view14:10, 15 December 2012Kernelhunter92Periodical save, work in progress
55455view14:00, 15 December 2012Kernelhunter92Periodical save, work in progress
55454view13:50, 15 December 2012Kernelhunter92Periodical save, work in progress
55450view10:52, 15 December 2012Kernelhunter92Reverted to version '10:22, 15 December 2012' by Kernelhunter92
55448view10:40, 15 December 2012Kernelhunter92Modified categories
55447view10:40, 15 December 2012Kernelhunter92Modified description
55446view10:31, 15 December 2012Kernelhunter92Reverted to version '19:20, 12 December 2012' by Kernelhunter92
55445view10:26, 15 December 2012Kernelhunter92Modified categories
55444view10:22, 15 December 2012Kernelhunter92Modified description
55443view10:21, 15 December 2012Kernelhunter92Modified title
55442view10:20, 15 December 2012ApplecoolPeriodical save, work in progress
55433view07:06, 15 December 2012ApplecoolReverted to version '07:01, 15 December 2012' by Applecool
55432view07:03, 15 December 2012ApplecoolModified categories
55431view07:01, 15 December 2012ApplecoolModified description
55129view19:20, 12 December 2012Sravanthisinhaadded
55128view19:09, 12 December 2012SravanthisinhaReverted to version '18:51, 12 December 2012' by Sravanthisinha
55127view19:07, 12 December 2012Sravanthisinhatry
55126view18:51, 12 December 2012SravanthisinhaModified categories
55125view18:50, 12 December 2012SravanthisinhaModified categories
55124view18:48, 12 December 2012SravanthisinhaModified description
55123view18:47, 12 December 2012SravanthisinhaNew pathway

Error details

exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/2/27/WP2404_56321.svg:
<BR>Status:254
<BR>Message:org.pathvisio.core.model.ConverterException: class org.jdom.input.JDOMParseException: Error on line 1: Content is not allowed in prolog.
	at org.jdom.input.SAXBuilder.build(SAXBuilder.java:504)
	at org.pathvisio.core.model.GpmlFormat.readFromXmlImpl(Unknown Source)
	at org.pathvisio.core.model.GpmlFormat.readFromXml(Unknown Source)
	at org.pathvisio.core.model.GpmlFormat.doImport(Unknown Source)
	at org.pathvisio.core.Engine.importPathway(Unknown Source)
	at org.pathvisio.core.util.Converter.main(Unknown Source)
Caused by: org.jdom.input.JDOMParseException: Error on line 1: Content is not allowed in prolog.
	... 6 more
Caused by: org.xml.sax.SAXParseException; lineNumber: 1; columnNumber: 1; Content is not allowed in prolog.
	at org.apache.xerces.util.ErrorHandlerWrapper.createSAXParseException(Unknown Source)
	at org.apache.xerces.util.ErrorHandlerWrapper.fatalError(Unknown Source)
	at org.apache.xerces.impl.XMLErrorReporter.reportError(Unknown Source)
	at org.apache.xerces.impl.XMLErrorReporter.reportError(Unknown Source)
	at org.apache.xerces.impl.XMLErrorReporter.reportError(Unknown Source)
	at org.apache.xerces.impl.XMLScanner.reportFatalError(Unknown Source)
	at org.apache.xerces.impl.XMLDocumentScannerImpl$PrologDispatcher.dispatch(Unknown Source)
	at org.apache.xerces.impl.XMLDocumentFragmentScannerImpl.scanDocument(Unknown Source)
	at org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source)
	at org.apache.xerces.parsers.XML11Configuration.parse(Unknown Source)
	at org.apache.xerces.parsers.XMLParser.parse(Unknown Source)
	at org.apache.xerces.parsers.AbstractSAXParser.parse(Unknown Source)
	at org.apache.xerces.jaxp.SAXParserImpl$JAXPSAXParser.parse(Unknown Source)
	at org.jdom.input.SAXBuilder.build(SAXBuilder.java:489)
	... 5 more

<BR>Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways/images/2/2e/WP2404_56321.gpml" "/var/www/wikipathways/images/2/27/WP2404_56321.svg" 2>&1<BR>' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255
Stack trace:
#0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio('/var/www/wikipa...', '/var/www/wikipa...')
#1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
#2 /var/www/wikipathways/wpi/extensions/Pathways/PathwayPage.php(21): Pathway->updateCache('svg')
#3 [internal function]: renderPathwayPage(Object(Parser), '<?xml version="...', Object(StripState))
#4 /var/www/wikipathways/includes/Hooks.php(125): call_user_func_array('renderPathwayPa...', Array)
#5 /var/www/wikipathways/includes/parser/Parser.php(318): wfRunHooks('ParserBeforeStr...', Array)
#6 /var/www/wikipathways/includes/Article.php(3406): Parser->parse('<?xml version="...', Object(Title), Object(ParserOptions), true, true, 55672)
#7 /var/www/wikipathways/includes/Article.php(875): Article->outputWikiText('<?xml version="...', false)
#8 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
#9 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
#10 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
#11 {main}