Glycolysis (Arabidopsis thaliana)

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1Chloroplasthexokinasefructose 1,6-bisphosphateHCO3-phosphoglycerate kinasefructose 6-phosphateglyceraldehyde 3-phosphate dehydrogenaseglucosepyruvate kinasephosphopyruvate hydrataseglucose-6-phosphate isomerasemalatepyruvatephosphoglycerate mutaseglucose 6-phosphateoxaloacetatePPi-dependent phosphofructokinaseglycerate 1,3-bisphosphateNAD+NADHphosphoenolpyruvate carboxylasemalic enzymeglycerate 3-phosphatephosphoenolpyruvatePPifructose 1,6-bisphosphate aldolaseglycerate 2-phosphateDihydroxyacetone phosphateglyceraldahyde-3-phosphatetriose phosphate isomeraseNADPHNADP+ATPADPmalate dehydrogenaseNAD+NADHATPADPATPADPATP-dependent phosphofructokinasePiATPADPPiH2OPiSucrose MetabolismStarch MetabolismCalvin-Benson CycleTCA Cycle(Krebs Cycle)Valine and IsoleucineBiosynthesisPiPiCysteine and MethionineBiosynthesisLysineBiosynthesisChloroplastMitochondrion


Description

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Quality Tags

Ontology Terms

 

Bibliography

  1. Lincoln Taiz, Eduardo Zeiger; ''Plant Physiology''; Sinauer Associates, third edition, 2002
  2. Karve A, Rauh BL, Xia X, Kandasamy M, Meagher RB, Sheen J, Moore BD; ''Expression and evolutionary features of the hexokinase gene family in Arabidopsis.''; Planta, 2008 PubMed Europe PMC Scholia
  3. Karve A, Rauh BL, Xia X, Kandasamy M, Meagher RB, Sheen J, Moore BD; ''Expression and evolutionary features of the hexokinase gene family in Arabidopsis.''; Planta, 2008 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
125286view16:41, 31 January 2023LarsgwAdd ISBN to reference
115459view08:16, 21 February 2021EgonwMade four pathways clickable
105900view11:36, 16 August 2019MkutmonHMDB identifier normalization
78381view10:22, 7 January 2015MaintBotadded missing graphIds
76229view12:05, 19 June 2014SbohlerAll protein noder are now annotated with UNIPROT IDs. Information about protein isoforms was added. Subcellular location of hexokinase 2 was verified by litterature, since the information is stated wrongly in UNIPROT.
75324view13:31, 19 May 2014SbohlerAdded cell border, added RNAs for GAPC1, GAPC2, NADP-ME 1, 2 and 3.
73929view11:13, 4 March 2014AnweshaModified description
73928view11:08, 4 March 2014SbohlerModified description
73927view11:05, 4 March 2014AnweshaAdded metabolite identifiers
73926view11:03, 4 March 2014AnweshaAdded metabolite identifiers
73925view10:58, 4 March 2014AnweshaAdded pathway identifiers
73878view21:50, 26 February 2014MaintBotOntology Term : 'glycolysis pathway' added !
73680view08:28, 15 February 2014EgonwAdded a bunch of missing metabolite identifiers.
73621view11:19, 6 February 2014SbohlerPeriodical save, work in progress
73620view10:54, 6 February 2014SbohlerAdded organelle labels
73605view13:22, 4 February 2014AnweshaNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
ADPMetaboliteCHEBI:16761 (ChEBI)
ATP-dependent phosphofructokinaseProtein2.7.1.11 (Enzyme Nomenclature)
ATPMetaboliteHMDB00538 (HMDB)
Calvin-Benson CyclePathwayWP2624 (WikiPathways)
Cysteine and Methionine BiosynthesisPathway
Dihydroxyacetone phosphateMetaboliteHMDB01473 (HMDB)
H2OMetaboliteHMDB02111 (HMDB)
HCO3-MetaboliteCHEBI:17544 (ChEBI)
Lysine BiosynthesisPathway
NAD+MetaboliteHMDB00902 (HMDB)
NADHMetaboliteHMDB01487 (HMDB)
NADP+MetaboliteHMDB00217 (HMDB)
NADPHMetaboliteHMDB00221 (HMDB)
PPi-dependent phosphofructokinaseProtein2.7.1.90 (Enzyme Nomenclature)
PPiMetaboliteCHEBI:35782 (ChEBI)
PiMetabolite
PiMetaboliteCHEBI:18367 (ChEBI)
Starch Metabolism PathwayWP2622 (WikiPathways)
Sucrose Metabolism PathwayWP2622 (WikiPathways)
TCA Cycle (Krebs Cycle)PathwayWP2624 (WikiPathways)
Valine and Isoleucine BiosynthesisPathway
fructose 1,6-bisphosphate aldolaseProtein4.1.2.13 (Enzyme Nomenclature)
fructose 1,6-bisphosphateMetaboliteHMDB01058 (HMDB)
fructose 6-phosphateMetaboliteHMDB00124 (HMDB)
glucose 6-phosphateMetaboliteHMDB01401 (HMDB)
glucose-6-phosphate isomeraseProtein5.3.1.9 (Enzyme Nomenclature)
glucoseMetaboliteHMDB00122 (HMDB)
glyceraldahyde-3-phosphateMetaboliteC00118 (KEGG Compound)
glyceraldehyde 3-phosphate dehydrogenaseProtein1.2.1.12 (Enzyme Nomenclature)
glycerate 1,3-bisphosphateMetaboliteCHEBI:16001 (ChEBI)
glycerate 2-phosphateMetaboliteCHEBI:58289 (ChEBI)
glycerate 3-phosphateMetaboliteCHEBI:58272 (ChEBI)
hexokinaseProtein2.7.1.1 (Enzyme Nomenclature)
malate dehydrogenaseProtein1.1.1.37 (Enzyme Nomenclature)
malateMetaboliteCHEBI:15595 (ChEBI)
malic enzymeProteinQ9LYG3 (Uniprot-TrEMBL)
oxaloacetateMetaboliteCHEBI:16452 (ChEBI)
phosphoenolpyruvate carboxylaseProtein4.1.1.31 (Enzyme Nomenclature)
phosphoenolpyruvateMetaboliteC00074 (KEGG Compound)
phosphoglycerate kinaseProtein2.7.2.3 (Enzyme Nomenclature)
phosphoglycerate mutaseProtein5.4.2.1 (Enzyme Nomenclature)
phosphopyruvate hydrataseProtein4.2.1.11 (Enzyme Nomenclature)
pyruvate kinaseProtein2.7.1.40 (Enzyme Nomenclature)
pyruvateMetaboliteCHEBI:15361 (ChEBI)
triose phosphate isomeraseProtein5.3.1.1 (Enzyme Nomenclature)

Annotated Interactions

No annotated interactions

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