Prion disease pathway (Homo sapiens)
From WikiPathways
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Proteins on this pathway have targeted assays available via the [https://assays.cancer.gov/available_assays?wp_id=WP3995 CPTAC Assay Portal]</Comment> | Proteins on this pathway have targeted assays available via the [https://assays.cancer.gov/available_assays?wp_id=WP3995 CPTAC Assay Portal]</Comment> | ||
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<Comment>https://classic.wikipathways.org/index.php/Pathway:WP1866</Comment> | <Comment>https://classic.wikipathways.org/index.php/Pathway:WP1866</Comment> | ||
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<Comment>https://classic.wikipathways.org/index.php/Pathway:WP1866</Comment> | <Comment>https://classic.wikipathways.org/index.php/Pathway:WP1866</Comment> | ||
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<Comment>https://classic.wikipathways.org/index.php/Pathway:WP1866</Comment> | <Comment>https://classic.wikipathways.org/index.php/Pathway:WP1866</Comment> | ||
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<Biopax> | <Biopax> | ||
Line 396: | Line 392: | ||
<bp:ID xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">CL:0000540</bp:ID> | <bp:ID xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">CL:0000540</bp:ID> | ||
<bp:Ontology xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Cell Type</bp:Ontology> | <bp:Ontology xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Cell Type</bp:Ontology> | ||
+ | </bp:openControlledVocabulary> | ||
+ | <bp:openControlledVocabulary xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#"> | ||
+ | <bp:TERM xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">prion disease</bp:TERM> | ||
+ | <bp:ID xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DOID:649</bp:ID> | ||
+ | <bp:Ontology xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Disease</bp:Ontology> | ||
</bp:openControlledVocabulary> | </bp:openControlledVocabulary> | ||
<bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="e7a"> | <bp:PublicationXref xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:id="e7a"> | ||
Line 410: | Line 411: | ||
</bp:PublicationXref> | </bp:PublicationXref> | ||
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<bp:Ontology xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pathway Ontology</bp:Ontology> | <bp:Ontology xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pathway Ontology</bp:Ontology> | ||
</bp:openControlledVocabulary> | </bp:openControlledVocabulary> | ||
Line 420: | Line 421: | ||
</bp:openControlledVocabulary> | </bp:openControlledVocabulary> | ||
<bp:openControlledVocabulary xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#"> | <bp:openControlledVocabulary xmlns:bp="http://www.biopax.org/release/biopax-level3.owl#"> | ||
- | <bp:TERM xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string"> | + | <bp:TERM xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">disease pathway</bp:TERM> |
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- | <bp:ID xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PW: | + | |
<bp:Ontology xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pathway Ontology</bp:Ontology> | <bp:Ontology xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Pathway Ontology</bp:Ontology> | ||
</bp:openControlledVocabulary> | </bp:openControlledVocabulary> | ||
</Biopax> | </Biopax> | ||
</Pathway> | </Pathway> |
Revision as of 17:46, 4 February 2024
Description
This pathway is a prion disease pathway, that describes what happens when there is a mutation in the PRNP gene. The left part of the pathway represents the pathway retrieved from literature and the right part of the pathway represents data found using databases. The left part shos the interaction of pathological prion protein with an unknown receptor protein, this interaction activates a signalling pathway. The endoplasmic reticulum releases calcium and ER stress is induced. Activation of Caspase 12 by ER-stress is followed by cleavage and activation of the executioner Caspase-3, causing neuronal apoptosis. According to the databases, NCAM-1 can initiate two mechanisms: the activation of FGFR and formation of intracellular signalling complexes. NCAM-1 interacts with Fyn and FAK, resulting in phosphorylation of these two tyrosine kinases. Phosphorylation of Fyn and FAK results in activation of MAPK, ERK1 and 2, cAMP response element binding protein (CREB) and transcription factors ELK and NFkB. CREB activates transcription of genes which are important for axonal growth, survival, and synaptic plasticity in neurons.
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Ontology Terms
Bibliography
- Hetz C, Russelakis-Carneiro M, Maundrell K, Castilla J, Soto C; ''Caspase-12 and endoplasmic reticulum stress mediate neurotoxicity of pathological prion protein.''; EMBO J, 2003 PubMed Europe PMC Scholia
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Annotated Interactions
No annotated interactions