invalid pathway title: exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/a/a1/WP4846_109740.svg:
Status:1
Message:Exception in thread "main" java.lang.NullPointerException
at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source)
at org.pathvisio.core.Engine.importPathway(Unknown Source)
at org.pathvisio.core.util.Converter.main(Unknown Source)
Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/a/a1/WP4846_109740.svg" 2>&1 ' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255
Stack trace:
- 0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
- 1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
- 2 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1153): Pathway->updateCache('svg')
- 3 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(129): Pathway->getImage()
- 4 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(53): makeThumbLinkObj(Object(Pathway), 'SARS-CoV-2 and ...', 'https://classic...', , , 'pwthumb', '250px')
- 5 [internal function]: renderPathwayImage(Object(Parser), 'Pathway:WP4846', '250px', , 'SARS-CoV-2 and ...')
- 6 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('renderPathwayIm...', Array)
- 7 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
- 8 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
- 9 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('{|? |?
internalParse('{|? |? parse('{|? |? addWikiTextTitle('{|? |? addWikiTextTitleTidy('{|? |? addWikiTextTidy('{|? |? renderNewRevision()
- 16 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
- 17 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
- 18 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
- 19 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
- 20 {main}
Collaborative project for curation biological processes involved in the COVID-19 disease after SARS-Cov-2 infection.
| invalid pathway title: exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/e/e6/WP4853_109740.svg:
Status:1
Message:Exception in thread "main" java.lang.NullPointerException
at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source)
at org.pathvisio.core.Engine.importPathway(Unknown Source)
at org.pathvisio.core.util.Converter.main(Unknown Source)
Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/e/e6/WP4853_109740.svg" 2>&1 ' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255
Stack trace:
- 0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
- 1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
- 2 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1153): Pathway->updateCache('svg')
- 3 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(129): Pathway->getImage()
- 4 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(53): makeThumbLinkObj(Object(Pathway), 'Coronavirus lip...', 'https://classic...', , , 'pwthumb', '250px')
- 5 [internal function]: renderPathwayImage(Object(Parser), 'Pathway:WP4853', '250px', , 'Coronavirus lip...')
- 6 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('renderPathwayIm...', Array)
- 7 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
- 8 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
- 9 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('{|? |?
internalParse('{|? |? parse('{|? |? addWikiTextTitle('{|? |? addWikiTextTitleTidy('{|? |? addWikiTextTidy('{|? |? renderNewRevision()
- 16 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
- 17 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
- 18 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
- 19 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
- 20 {main}
Lipid metabolism alternations that are related to infection by the corona virus.
| invalid pathway title: exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/a/af/WP4860_109740.svg:
Status:1
Message:Exception in thread "main" java.lang.NullPointerException
at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source)
at org.pathvisio.core.Engine.importPathway(Unknown Source)
at org.pathvisio.core.util.Converter.main(Unknown Source)
Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/a/af/WP4860_109740.svg" 2>&1 ' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255
Stack trace:
- 0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
- 1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
- 2 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1153): Pathway->updateCache('svg')
- 3 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(129): Pathway->getImage()
- 4 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(53): makeThumbLinkObj(Object(Pathway), 'Hijack of Ubiqu...', 'https://classic...', , , 'pwthumb', '250px')
- 5 [internal function]: renderPathwayImage(Object(Parser), 'Pathway:WP4860', '250px', , 'Hijack of Ubiqu...')
- 6 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('renderPathwayIm...', Array)
- 7 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
- 8 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
- 9 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('{|? |?
internalParse('{|? |? parse('{|? |? addWikiTextTitle('{|? |? addWikiTextTitleTidy('{|? |? addWikiTextTidy('{|? |? renderNewRevision()
- 16 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
- 17 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
- 18 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
- 19 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
- 20 {main}
SARS-CoV-2 includes a novel Orf10 that interacts with muliple members of the Cullin 2 ubiquitin ligase complex.
| invalid pathway title: exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/d/da/WP4862_109740.svg:
Status:1
Message:Exception in thread "main" java.lang.NullPointerException
at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source)
at org.pathvisio.core.Engine.importPathway(Unknown Source)
at org.pathvisio.core.util.Converter.main(Unknown Source)
Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/d/da/WP4862_109740.svg" 2>&1 ' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255
Stack trace:
- 0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
- 1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
- 2 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1153): Pathway->updateCache('svg')
- 3 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(129): Pathway->getImage()
- 4 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(53): makeThumbLinkObj(Object(Pathway), 'Autophagy durin...', 'https://classic...', , , 'pwthumb', '250px')
- 5 [internal function]: renderPathwayImage(Object(Parser), 'Pathway:WP4862', '250px', , 'Autophagy durin...')
- 6 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('renderPathwayIm...', Array)
- 7 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
- 8 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
- 9 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('{|? |?
internalParse('{|? |? parse('{|? |? addWikiTextTitle('{|? |? addWikiTextTitleTidy('{|? |? addWikiTextTidy('{|? |? renderNewRevision()
- 16 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
- 17 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
- 18 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
- 19 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
- 20 {main}
|