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| <!-- ANNOUNCEMENTS --> | | <!-- ANNOUNCEMENTS --> |
| + | <!-- |
| |-valign="top" align="center" | | |-valign="top" align="center" |
| |colspan="8"|<div class="frontPagePanel redBg" style="width:95%;margin:1em;width=100%"> | | |colspan="8"|<div class="frontPagePanel redBg" style="width:95%;margin:1em;width=100%"> |
| <h2 class="frontPagePanel redFg">Share your pathway knowledge in the fight against COVID-19</h2> | | <h2 class="frontPagePanel redFg">Share your pathway knowledge in the fight against COVID-19</h2> |
| <font size=2>'''''ACCESS'' the rapidly growing [[Portal:COVID-19|collection of COVID-19 pathways]], ''CONTRIBUTE'' your time and domain knowledge about pathway biology as a [[Help:Authors|pathway author]], and ''USE'' these pathways in [[Help:Tools_using_WikiPathways|your research]].'''</font></div> | | <font size=2>'''''ACCESS'' the rapidly growing [[Portal:COVID-19|collection of COVID-19 pathways]], ''CONTRIBUTE'' your time and domain knowledge about pathway biology as a [[Help:Authors|pathway author]], and ''USE'' these pathways in [[Help:Tools_using_WikiPathways|your research]].'''</font></div> |
| + | --> |
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| <!-- Page Content --> | | <!-- Page Content --> |
| |-valign="top" | | |-valign="top" |
| |<div class="frontPagePanel greenBg" style="width:95%;margin:1em;width=100%"> | | |<div class="frontPagePanel greenBg" style="width:95%;margin:1em;width=100%"> |
- | <h2 class="frontPagePanel greenFg">Welcome to WikiPathways</h2> | + | <h2 class="frontPagePanel greenFg">Try the New WikiPathways</h2> |
- | <font size=2>'''WikiPathways is a database of biological pathways maintained by and for the scientific community.''' | + | <font size=2>'''Visit https://wikipathways.org to see the new version of WikiPathways.''' This is the "classic" version of WikiPathways will not be maintained for much longer. |
- | ''Read about our 12-year journey so far and [[WikiPathways:ExitBeta_Announcement|official exit from beta]] or our [https://doi.org/10.1093/nar/gkaa1024 2021 NAR paper]''</font></div>
| + | </font></div> |
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| <div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%"> | | <div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%"> |
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| |rowspan="1" align="center" style="width:25%;"| | | |rowspan="1" align="center" style="width:25%;"| |
| |rowspan="1" align="center" style="width:25%;"| | | |rowspan="1" align="center" style="width:25%;"| |
- | |align="center" valign="top"|<big>'''Convert'''</big>{{#imgLink:RequestForm2.png|210|center||external|https://goo.gl/forms/PqBXnKXAjI1hnQMQ2|Figure Conversion}} | + | |align="center" valign="top"|<big>'''Request'''</big>{{#imgLink:RequestForm2.png|210|center||external|https://github.com/wikipathways/pathway-curation-tasks/issues|Figure Conversion}} |
| '''Queue figures for conversion''' | | '''Queue figures for conversion''' |
| |rowspan="1" align="center" style="width:25%;"| | | |rowspan="1" align="center" style="width:25%;"| |
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| <div class="frontPagePanel blueBg" style="width:90%;margin:1em;width=100%;"> | | <div class="frontPagePanel blueBg" style="width:90%;margin:1em;width=100%;"> |
| <h2 class="frontPagePanel blueFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:CurrentHighlight | true}} | | <h2 class="frontPagePanel blueFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:CurrentHighlight | true}} |
- | <h2 class="frontPagePanel blueFg">Curator of the Week</h2>{{#imgLink:ElissonLopes.jpg|70|center|||http://www.wikipathways.org/index.php/User:Elisson_nl|Elisson Lopes}} [http://www.wikipathways.org/index.php/User:Elisson_nl Elisson Lopes (UFMG, Brazil)]
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| <h2 class="frontPagePanel blueFg" style="margin-top:0.5em;">Updates</h2> | | <h2 class="frontPagePanel blueFg" style="margin-top:0.5em;">Updates</h2> |
- | * '''January 2021 Release''': [[Special:RecentPathwayChanges|343 edits]] by [[WikiPathways:Statistics#Contribution_scores|15 contributors]] and [[WikiPathways:NewPathwayReleases#January_2021|4 new pathways]]'''. | + | * '''April 2024 Release''': [[Special:RecentPathwayChanges|290 edits]] by [[WikiPathways:Statistics#Contribution_scores|11 contributors]] and [https://www.wikipathways.org/browse/new.html 2 new pathways]. |
- | * '''December 2020 Release''': [[Special:RecentPathwayChanges|102 edits]] by [[WikiPathways:Statistics#Contribution_scores|9 contributors]] and [[WikiPathways:NewPathwayReleases#December_2020|5 new pathways]]'''. | + | * '''March 2024 Release''': [[Special:RecentPathwayChanges|542 edits]] by [[WikiPathways:Statistics#Contribution_scores|9 contributors]] and [https://www.wikipathways.org/browse/new.html 10 new pathways]. |
- | * '''November 2020 Release''': [[Special:RecentPathwayChanges|614 edits]] by [[WikiPathways:Statistics#Contribution_scores|12 contributors]] and [[WikiPathways:NewPathwayReleases#November_2020|4 new pathways]]'''. | + | * '''February 2024 Release''': [[Special:RecentPathwayChanges|586 edits]] by [[WikiPathways:Statistics#Contribution_scores|12 contributors]] and [https://www.wikipathways.org/browse/new.html 16 new pathways]. |
- | * '''October 2020 Release''': [[Special:RecentPathwayChanges|670 edits]] by [[WikiPathways:Statistics#Contribution_scores|8 contributors]] and [[WikiPathways:NewPathwayReleases#October_2020|7 new pathways]]'''. | + | * '''January 2024 Release''': [[Special:RecentPathwayChanges|105 edits]] by [[WikiPathways:Statistics#Contribution_scores|11 contributors]] and [https://www.wikipathways.org/browse/new.html 1 new pathway]. |
- | * '''September 2020 Release''': [[Special:RecentPathwayChanges|125 edits]] by [[WikiPathways:Statistics#Contribution_scores|11 contributors]] and [[WikiPathways:NewPathwayReleases#September_2020|3 new pathways]]'''. | + | * '''December 2023 Release''': [[Special:RecentPathwayChanges|120 edits]] by [[WikiPathways:Statistics#Contribution_scores|12 contributors]]. |
- | * '''August 2020 Release''': [[Special:RecentPathwayChanges|165 edits]] by [[WikiPathways:Statistics#Contribution_scores|21 contributors]] and [[WikiPathways:NewPathwayReleases#August_2020|1 new pathway]]'''. | + | * '''November 2023 Release''': [[Special:RecentPathwayChanges|120 edits]] by [[WikiPathways:Statistics#Contribution_scores|10 contributors]] and [https://www.wikipathways.org/browse/new.html 3 new pathways]. |
- | * '''July 2020 Release''': [[Special:RecentPathwayChanges|151 edits]] by [[WikiPathways:Statistics#Contribution_scores|12 contributors]] and [[WikiPathways:NewPathwayReleases#July_2020|4 new pathways]]'''. | + | * '''October 2023 Release''': [[Special:RecentPathwayChanges|157 edits]] by [[WikiPathways:Statistics#Contribution_scores|13 contributors]] and [https://www.wikipathways.org/browse/new.html 2 new pathways]. |
- | * '''June 2020 Release''': [[Special:RecentPathwayChanges|215 edits]] by [[WikiPathways:Statistics#Contribution_scores|18 contributors]] and [[WikiPathways:NewPathwayReleases#June_2020|9 new pathways]]'''. | + | * '''September 2023 Release''': [[Special:RecentPathwayChanges|85 edits]] by [[WikiPathways:Statistics#Contribution_scores|11 contributors]] and [https://www.wikipathways.org/browse/new.html 4 new pathways]. |
- | * '''May 2020 Release''': [[Special:RecentPathwayChanges|269 edits]] by [[WikiPathways:Statistics#Contribution_scores|16 contributors]] and [[WikiPathways:NewPathwayReleases#May_2020|18 new pathways]]'''. | + | * '''August 2023 Release''': [[Special:RecentPathwayChanges|207 edits]] by [[WikiPathways:Statistics#Contribution_scores|9 contributors]] and [https://www.wikipathways.org/browse/new.html 22 new pathways]. |
| [[WikiPathways:Updates|more...]] | | [[WikiPathways:Updates|more...]] |
| <h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='2'></recentChanges> [[WikiPathways:Discussions|more...]] | | <h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='2'></recentChanges> [[WikiPathways:Discussions|more...]] |
Try the New WikiPathways
Visit https://wikipathways.org to see the new version of WikiPathways. This is the "classic" version of WikiPathways will not be maintained for much longer.
Find Pathways
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You can search by:
- Pathway name (Apoptosis)
- Gene or protein name (p53)
- Any page content (cancer)
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Get Pathways
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Multiple formats and methods
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| Growth
New pathways added each month
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Edit Pathways
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Play with the editor tools
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Today's Featured Pathway
SARS-CoV-2 and COVID-19 pathway (Homo sapiens) invalid pathway title: exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/e/e3/WP4846_115102.svg:
Status:1
Message:Exception in thread "main" java.lang.NullPointerException
at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source)
at org.pathvisio.core.Engine.importPathway(Unknown Source)
at org.pathvisio.core.util.Converter.main(Unknown Source)
Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/e/e3/WP4846_115102.svg" 2>&1 ' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255
Stack trace:
- 0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
- 1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
- 2 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1153): Pathway->updateCache('svg')
- 3 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(129): Pathway->getImage()
- 4 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(53): makeThumbLinkObj(Object(Pathway), 'SARS-CoV-2 and ...', 'https://classic...', 'SARS-CoV-2 and ...', 'center', 'pwthumb', '300')
- 5 [internal function]: renderPathwayImage(Object(Parser), 'Pathway:WP4846', '300', 'center', 'SARS-CoV-2 and ...', 'pathway', 'SARS-CoV-2 and ...')
- 6 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('renderPathwayIm...', Array)
- 7 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
- 8 /var/www/wikipathways/includes/parser/Parser.php(2986): PPFrame_DOM->expand(Object(PPNode_DOM))
- 9 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
- 10 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
- 11 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('{{Template:Toda...')
- 12 /var/www/wikipathways/includes/parser/Parser.php(439): Parser->internalParse('{{Template:Toda...')
- 13 /var/www/wikipathways/wpi/extensions/PathwayOfTheDay/PathwayOfTheDay.php(60): Parser->recursiveTagParse('{{Template:Toda...')
- 14 [internal function]: getPathwayOfTheDay(Object(Parser), 'Tuesday 21 May ...', 'Curation:Curren...', 'true')
- 15 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('getPathwayOfThe...', Array)
- 16 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
- 17 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
- 18 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('{| ?<!-- Specia...')
- 19 /var/www/wikipathways/includes/parser/Parser.php(321): Parser->internalParse('{| ?<!-- Specia...')
- 20 /var/www/wikipathways/includes/OutputPage.php(405): Parser->parse('{| ?<!-- Specia...', Object(Title), Object(ParserOptions), true, true, 129405)
- 21 /var/www/wikipathways/includes/OutputPage.php(391): OutputPage->addWikiTextTitle('{| ?<!-- Specia...', Object(Title), true, true)
- 22 /var/www/wikipathways/includes/OutputPage.php(500): OutputPage->addWikiTextTitleTidy('{| ?<!-- Specia...', Object(Title), true)
- 23 /var/www/wikipathways/includes/DifferenceEngine.php(313): OutputPage->addWikiTextTidy('{| ?<!-- Specia...')
- 24 /var/www/wikipathways/includes/DifferenceEngine.php(271): DifferenceEngine->renderNewRevision()
- 25 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
- 26 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
- 27 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
- 28 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
- 29 {main}
Updates
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DiscussionsNo recent changes more...
Forum Google group wikipathways-discuss
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