WikiPathways

From WikiPathways

(Difference between revisions)

Revision as of 14:58, 11 April 2024

Try the New WikiPathways

Visit https://wikipathways.org to see the new version of WikiPathways. This is the "classic" version of WikiPathways will not be maintained for much longer.

Find Pathways

Search

Browse

Browse by species and category

You can search by:

Pathway name (Apoptosis)
Gene or protein name (p53)
Any page content (cancer)

Get Pathways

	Download Multiple formats and methods			Growth New pathways added each month

Edit Pathways

	Learn Play with the editor tools			Request Queue figures for conversion

We want your feedback! A quick survey to help us focus development: https://www.surveymonkey.com/r/wikipathways

Today's Featured Pathway

SARS-CoV-2 and ACE2 receptor: molecular mechanisms (Homo sapiens)

Image does not exist

SARS-CoV-2 and ACE2 receptor: molecular mechanisms

Updates

April 2024 Release: 290 edits by 11 contributors and 2 new pathways.
March 2024 Release: 542 edits by 9 contributors and 10 new pathways.
February 2024 Release: 586 edits by 12 contributors and 16 new pathways.
January 2024 Release: 105 edits by 11 contributors and 1 new pathway.
December 2023 Release: 120 edits by 12 contributors.
November 2023 Release: 120 edits by 10 contributors and 3 new pathways.
October 2023 Release: 157 edits by 13 contributors and 2 new pathways.
September 2023 Release: 85 edits by 11 contributors and 4 new pathways.
August 2023 Release: 207 edits by 9 contributors and 22 new pathways.

more...

Discussions

No recent changes more...

Forum

Google group wikipathways-discuss

@@ Line 1: / Line 1: @@
-__NOEDITSECTION__ <!-- Turn off section editing -->
-__NOTOC__ <!-- Turn off Table of Contents  -->
 {|
-<!-- Curation Event Section-->
+<!-- Special Notice Section-->
 <!--
 |-valign="top"
 |colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
-<h2 class="frontPagePanel blueFg">Oct 2011 Curation Event Is On!</h2>
+<h2 class="frontPagePanel yellowFg">11 April 2019: Scheduled Downtime</h2>
-<font size=2>'''Have you always wanted to contribute to WikiPathways but didn't know where to start? Here's your chance! We are organizing our fourth curation event to improve the quality and extent of our pathways. Curation events are open to all registered WikiPathways users, no prior experience necessary! [[Curation_Jamboree_Oct_2011|More about the jamboree...]] [[Support_chat_channel|Join live forum...]]'''</font></div>
+<font size=2>'''We will be taking the site down for an hour at 24:00UTC on April 11th. We are switching over to new and improved infrastructure! Sorry for any inconveniences.'''</font></div>
 -->
+<!-- TECHNICAL DIFFICULTIES -->
+<!--
+|-valign="top"
+|colspan="8"|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
+<h2 class="frontPagePanel yellowFg">2015-Sep-01: Technical issues.</h2>
+<font size=2>'''We are currently experiencing some technical issues, so some pages are not accessible. We are working hard to fix those issues. Sorry for any inconveniences.'''</font></div>
+-->
+<!-- ANNOUNCEMENTS -->
+<!--
+|-valign="top" align="center"
+|colspan="8"|<div class="frontPagePanel redBg" style="width:95%;margin:1em;width=100%">
+<h2 class="frontPagePanel redFg">Share your pathway knowledge in the fight against COVID-19</h2>
+<font size=2>'''''ACCESS'' the rapidly growing [[Portal:COVID-19|collection of COVID-19 pathways]], ''CONTRIBUTE'' your time and domain knowledge about pathway biology as a [[Help:Authors|pathway author]], and ''USE'' these pathways in [[Help:Tools_using_WikiPathways|your research]].'''</font></div>
+-->
+<!-- Page Content -->
 |-valign="top"
-|<div class="frontPagePanel redBg" style="width:95%;margin:1em;width=100%">
+|<div class="frontPagePanel greenBg" style="width:95%;margin:1em;width=100%">
-<h2 class="frontPagePanel redFg">Welcome to WikiPathways <sup>BETA</sup></h2>
+<h2 class="frontPagePanel greenFg">Try the New WikiPathways</h2>
-<font size=2>'''WikiPathways is an open, public platform dedicated to the curation of biological pathways by and for the scientific community. [[WikiPathways:About|More about WikiPathways...]]'''</font></div>
+<font size=2>'''Visit https://wikipathways.org to see the new version of WikiPathways.''' This is the "classic" version of WikiPathways will not be maintained for much longer.
+</font></div>
 <div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
-<h2 class="frontPagePanel blueFg">Finding Pathways</h2>
+<h2 class="frontPagePanel blueFg">Find Pathways</h2>
 {|style="width:100%;" border="0" valign="top" cellspacing="2" cellpadding="1" align="center"
 |-
@@ Line 24: / Line 39: @@
 |rowspan="2" align="center" style="width:25%;"|
 |rowspan="2" align="center" style="width:25%;"|
-|rowspan="2" align="center" valign="top"|<big>'''Browse'''</big>{{#imgLink:Browse_thumb_200.jpg|200|center||special|BrowsePathwaysPage|Browse}}
+|rowspan="2" align="center" valign="top"|<big>'''Browse'''</big>{{#imgLink:Browse_thumb.png|200|center||special|BrowsePathwaysPage|Browse}}
 '''Browse by species and category'''
 |rowspan="2" align="center" style="width:25%;"|
@@ Line 36: / Line 51: @@
 |}
-<h2 class="frontPagePanel blueFg">Contributing New Pathways</h2>
+<h2 class="frontPagePanel blueFg">Get Pathways</h2>
 {|style="width:100%;" border="0" valign="top" cellspacing="2" cellpadding="1" align="center"
 |-
 |rowspan="1" align="center" style="width:25%;"|
-|align="center" valign="top"|<big>'''Create'''</big>{{#imgLink:Create_thumb_160.jpg|160|center||special|CreatePathwayPage|Create}}
+|align="center" valign="top"|<big>'''Download'''</big>{{#imgLink:Download_label.png|215|center|||Download_Pathways|Download}}
-'''Create a new pathway page'''
+'''Multiple formats and methods'''
 |rowspan="1" align="center" style="width:25%;"|
 |rowspan="1" align="center" style="width:25%;"|
-|rowspan="1" align="center" valign="top"|<big>'''Suggest'''</big>{{#imgLink:Wishlist_thumb_200.jpg|200|center||special|SpecialWishList|Wish list}}
+|rowspan="1" align="center" valign="top"|<big>'''Growth'''</big>{{#imgLink:Wp_growth_label.png|200|center|||WikiPathways:Statistics|Growth}}
-'''Add a pathway to the wish list'''
+'''New pathways added each month'''
 |rowspan="1" align="center" style="width:25%;"|
 |-
@@ Line 51: / Line 66: @@
 |}
-<h2 class="frontPagePanel blueFg">Sample Pathway Pages</h2>
+<h2 class="frontPagePanel blueFg">Edit Pathways</h2>
 {|style="width:100%;" border="0" valign="top" cellspacing="2" cellpadding="1" align="center"
 |-
-|rowspan="1" align="center" style="width:4%;"|
+|rowspan="1" align="center" style="width:25%;"|
-|rowspan="1" align="center" valign="top" style="width:45%;"|<big>'''Sandbox'''</big>{{#imgLink:Sandbox_thumb_200.jpg|200|center||pathway|WP4|Sandbox}}
+|align="center" valign="top"|<big>'''Learn'''</big>{{#imgLink:AcademyPath.png|200|center||external|http://academy.wikipathways.org|WikiPathways Academy}}
 '''Play with the editor tools'''
-|rowspan="1" align="center" style="width:4%;"|
+|rowspan="1" align="center" style="width:25%;"|
-|rowspan="1" align="center" style="width:1%;"|
+|rowspan="1" align="center" style="width:25%;"|
-|align="left" valign="top" style="width:45%;"|
+|align="center" valign="top"|<big>'''Request'''</big>{{#imgLink:RequestForm2.png|210|center||external|https://github.com/wikipathways/pathway-curation-tasks/issues|Figure Conversion}}
-'''Check out the following pages:'''<br>
+'''Queue figures for conversion'''
-* [[Special:RecentPathwayChanges | Show recent changes]]
+|rowspan="1" align="center" style="width:25%;"|
-* [[Special:NewPathwaysPage | Show new pathways]]
+|-
-* [[Special:MostEditedPathwaysPage | Show most edited pathways]]
+|colspan="7"|
-* [[Special:PopularPathwaysPage | Show most viewed pathways]]
+|}
-* [[Special:SpecialWishList | Show pathway wish list]]
-* [http://wikipathways.tumblr.com/ Selected publications using WikiPathways].
+<!-- SURVEY -->
-'''For more information see the [[Help:Contents |Help pages]]'''
+{|style="width:100%;margin-top:3em;" border="0" cellspacing="2" cellpadding="1" align="center"
-|rowspan="1" align="center" style="width:1%;"|
+|-
+|<div class="frontPagePanel yellowBg" style="width:95%;margin:1em;width=100%">
+<h2 class="frontPagePanel yellowFg">We want your feedback! A quick survey to help us focus development: [https://www.surveymonkey.com/r/wikipathways https://www.surveymonkey.com/r/wikipathways]</h2></div>
 |-
 |colspan="7"|
@@ Line 77: / Line 94: @@
 | valign="top"|
-<div class="frontPagePanel greenBg" style="width:90%;margin:1em;width=100%;">
+<div class="frontPagePanel blueBg" style="width:90%;margin:1em;width=100%;">
-<h2 class="frontPagePanel greenFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:FeaturedPathway | true}}
+<h2 class="frontPagePanel blueFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:CurrentHighlight | true}}
-<h2 class="frontPagePanel greenFg">Latest discussions</h2><recentChanges class="greenBg" style="border:none" namespace='90' limit='3'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]
+<h2 class="frontPagePanel blueFg" style="margin-top:0.5em;">Updates</h2>
-<h2 class="frontPagePanel greenFg">Forum</h2><rss>https://groups.google.com/forum/feed/wikipathways-discuss/msgs/rss_v2_0.xml|short|max=3</rss>&nbsp;&nbsp;&nbsp;&nbsp;[http://groups.google.com/group/wikipathways-discuss more...]
+* '''April 2024 Release''': [[Special:RecentPathwayChanges|290 edits]] by [[WikiPathways:Statistics#Contribution_scores|11 contributors]] and [https://www.wikipathways.org/browse/new.html 2 new pathways].
-<h2 class="frontPagePanel greenFg">New!</h2>
+* '''March 2024 Release''': [[Special:RecentPathwayChanges|542 edits]] by [[WikiPathways:Statistics#Contribution_scores|9 contributors]] and [https://www.wikipathways.org/browse/new.html 10 new pathways].
-* Interactive pathway viewer, [[Pathway:WP4|try it here!]]
+* '''February 2024 Release''': [[Special:RecentPathwayChanges|586 edits]] by [[WikiPathways:Statistics#Contribution_scores|12 contributors]] and [https://www.wikipathways.org/browse/new.html 16 new pathways].
-* [[PathwayWidget|Include an interactive pathway image]] on your own blog/website
+* '''January 2024 Release''': [[Special:RecentPathwayChanges|105 edits]] by [[WikiPathways:Statistics#Contribution_scores|11 contributors]] and [https://www.wikipathways.org/browse/new.html 1 new pathway].
-* [[WikiPathways:Statistics|Curation statistics]]
+* '''December 2023 Release''': [[Special:RecentPathwayChanges|120 edits]] by [[WikiPathways:Statistics#Contribution_scores|12 contributors]].
+* '''November 2023 Release''': [[Special:RecentPathwayChanges|120 edits]] by [[WikiPathways:Statistics#Contribution_scores|10 contributors]] and [https://www.wikipathways.org/browse/new.html 3 new pathways].
+* '''October 2023 Release''': [[Special:RecentPathwayChanges|157 edits]] by [[WikiPathways:Statistics#Contribution_scores|13 contributors]] and [https://www.wikipathways.org/browse/new.html 2 new pathways].
+* '''September 2023 Release''': [[Special:RecentPathwayChanges|85 edits]] by [[WikiPathways:Statistics#Contribution_scores|11 contributors]] and [https://www.wikipathways.org/browse/new.html 4 new pathways].
+* '''August 2023 Release''': [[Special:RecentPathwayChanges|207 edits]] by [[WikiPathways:Statistics#Contribution_scores|9 contributors]] and [https://www.wikipathways.org/browse/new.html 22 new pathways].
+&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Updates|more...]]
+<h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='2'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]
+<h2 class="frontPagePanel blueFg">Forum</h2><rss>https://groups.google.com/group/wikipathways-discuss/feed/rss_v2_0_msgs.xml|short|max=2</rss>&nbsp;&nbsp;&nbsp;&nbsp;[http://groups.google.com/group/wikipathways-discuss Google group wikipathways-discuss]
-<h2 class="frontPagePanel greenFg">Community Interest</h2>
-Portals within WikiPathways for communities with focused pathway interests:
-* [[Portal:CIRM|CIRM]] stem cell pathways
-* [[Portal:Micronutrient|Micronutrient initiative]] nutrition pathways
-* [[Portal:GenMAPP|GenMAPP]] analysis pathways
-* [[Portal:BiGCaT|BiGCaT]] contributed pathways
-Want to start your own Portal? [[Contact_Us|Contact us!]]
-<h2 class="frontPagePanel greenFg">Statistics</h2>{{ #siteStats: class="greenBg" style="border: 0;"}}
 </div>
 |}
+__NOEDITSECTION__ <!-- Turn off section editing -->
+__NOTOC__ <!-- Turn off Table of Contents  -->

WikiPathways

From WikiPathways

Revision as of 14:58, 11 April 2024

Try the New WikiPathways

Find Pathways

Get Pathways

Edit Pathways

We want your feedback! A quick survey to help us focus development: https://www.surveymonkey.com/r/wikipathways

Today's Featured Pathway

Updates

Discussions

Forum

Views

Personal tools

search

Download

Activity

Tools

Community Portals

Toolbox