Exercise-induced circadian regulation (Danio rerio)

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ArcPathVisio Brace Ellipse EndoplasmicReticulum GolgiApparatus HexagonPathVisio MimDegradation Mitochondria Octagon PentagonPathVisio Rectangle RoundedRectangle SarcoplasmicReticulum TriangleEquilateralEast TrianglePathVisio none mHrts mLvrsStructural/CytoskeletonE-BoxmHrtsmLvrs,pLREmHrtsmLvrpmHrts mLvrs, mSCNpmHrtsCry2mLvrsMetabolismmHrtsmHrtsmHrts LvrspmLvrsmSCNpmLvrs,pmSCNpmHrts mLvrs,p mSCNpChaperonemHrts mLvrpmHrtsmLvrpPerSignalingmLvrpmLvrpmLvrsE-BoxmHrtsPer1mLvrs,pmHrtsmHrts mLvrsmLvrp mSCNpmSCNpmLvrsCell CyclemHrtsmHrtsmLvrs,p SCNpProtein ModificationTranscriptionmLvrs,pmSCNpCrymSCNpmLvrsmLvrsPer2mHrts mLvrs,p mSCNDNA/RNA BindingmLvrpmHrtsOthermSCNpNucleusCry1mLvrpmHrtsLREmLvrp mSCNpmLvrs,pmHrts mLvrs,pcry3tob1appp2cbnckap1qki2ucp3reverbb2cebpbherpud1gfra1bbtg1eif4g2bklf9vapalarntlcastpsma4sf3a3hist1h2bappp1r3cbcry1adnaja1lclockgstmncoa4etv6oazincldn5ahspa8g0s2sumo3bcbx3amyf6pigfdazap2rbpmsidi1ugp2bsi:busm1-160c18.6tab2zfrper2sumoltubb4bgstp1genx-3414per4puracry1bName: Exercise-induced circadian regulationLast Modified: 10/17/2013Organism: Danio rerio


Description

This pathway describes the exercise induced circadian regulation in zebrafish (Danio rerio).

Comments

GenMAPP notes 
Time- and exercise-dependent gene regulation in human skeletal muscle

Alexander C Zambon, Erin L McDearmon, Nathan Salomonis, Karen M Vranizan, Kirsten L Johansen, Deborah Adey, Joseph S Takahashi, Morris Schambelan, Bruce R Conklin
Genome Biology 4(10): R61
http://genomebiology.com/2003/4/10/R61
Published 25 September 2003

GenMAPP remarks 
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Quality Tags

Image:NeedsRef.pngAdd references
Image:Curated.pngApproved version
Image:MissingXref.pngAnnotate nodes

Ontology Terms

 

Bibliography

No bibliography


History

View all...
CompareRevisionActionTimeUserComment
134381
Approved
view15:47, 21 July 2024EweitzRemove template comment
116864view10:59, 14 May 2021EweitzModified title
109426view08:04, 17 March 2020L DupuisFixed interactions
96480view16:17, 15 March 2018FehrhartModified description
96479view16:16, 15 March 2018Fehrhartadded gene annotations
96472view15:53, 15 March 2018Fehrhartfixed connections
96470view15:49, 15 March 2018Fehrhartfixed connections
88051view13:46, 25 July 2016SusanOntology Term : 'regulatory pathway' added !
77444view20:29, 8 September 2014MaintBotremoved homology label
77425view08:49, 8 September 2014Mkutmonupdated gene lables
71501view19:20, 17 October 2013MaintBotAutomated update of data sources
70999view15:49, 22 September 2013EgonwUsed the "nucleus" cellular compartment instead of a line, and connected two lines.
69891view18:49, 11 July 2013AlexanderPicoModified title
68617view04:01, 6 July 2013MaintBotUpdated to 2013 gpml schema
40779view22:15, 1 March 2011MaintBotRemoved redundant pathway information and comments
34170view21:17, 9 December 2009MaintBotAutomatic update of empty xrefs
29819view23:27, 2 June 2009Khansperschanged name
21864view11:32, 14 November 2008MaintBot[[Pathway:Danio rerio:Circadian Exercise]] moved to [[Pathway:WP562]]: Moved to stable identifier
12068view08:46, 15 May 2008MaintBotAdded to category $category
12066view08:46, 15 May 2008A.C.ZambonUploaded new pathway

External references

DataNodes

View all...
Name  ↓Type  ↓Database reference  ↓Comment  ↓
arntlGeneProductENSDARG00000006791 (Ensembl)
btg1GeneProduct114432 (Entrez Gene) 93104_at
castGeneProduct563084 (Entrez Gene) 93829_at
cbx3aGeneProductENSDARG00000003860 (Ensembl) 100405_at
cebpbGeneProduct140814 (Entrez Gene) 92925_at
cldn5aGeneProduct406559 (Entrez Gene) 104516_at
clockGeneProduct30140 (Entrez Gene)
cry1aGeneProductENSDARG00000045768 (Ensembl)
cry1bGeneProductENSDARG00000011583 (Ensembl)
cry3GeneProduct83774 (Entrez Gene)
dazap2GeneProduct324316 (Entrez Gene) 94454_at
dnaja1lGeneProduct323922 (Entrez Gene) 97261_at
eif4g2bGeneProduct334618 (Entrez Gene) 100535_at
etv6GeneProductENSDARG00000069193 (Ensembl) 93866_s_at
g0s2GeneProductENSDARG00000078859 (Ensembl) 97531_at
genx-3414GeneProduct104116_at
gfra1bGeneProduct79377 (Entrez Gene) 93872_at
gstmGeneProduct324366 (Entrez Gene) 97681_f_at
gstp1GeneProduct79381 (Entrez Gene) 99583_at
herpud1GeneProduct565499 (Entrez Gene) 95057_at
hist1h2baGeneProductENSDARG00000034203 (Ensembl) 93833_s_at
hspa8GeneProduct573376 (Entrez Gene) 96564_at
idi1GeneProduct553513 (Entrez Gene) 96269_at
klf9GeneProductENSDARG00000068194 (Ensembl)
  • 93527_at
  • in human bteb1 is former name for klf9
myf6GeneProduct404208 (Entrez Gene) 102265_at
nckap1GeneProductENSDARG00000060853 (Ensembl) 95508_at
ncoa4GeneProduct394104 (Entrez Gene) 97843_at
oazinGeneProductENSDARG00000035869 (Ensembl) 101002_at
per2GeneProduct140633 (Entrez Gene)
per4GeneProduct406204 (Entrez Gene)
pigfGeneProduct402942 (Entrez Gene) 104725_at
ppp1r3cbGeneProduct393807 (Entrez Gene) 93933_at
ppp2cbGeneProduct406582 (Entrez Gene) 101101_at
psma4GeneProduct326687 (Entrez Gene) 97459_at
puraGeneProduct415106 (Entrez Gene) 103501_at
qki2GeneProduct393815 (Entrez Gene) 95096_at (mouse)
rbpmsGeneProductENSDARG00000088558 (Ensembl) 103888_at
reverbb2GeneProduct30271 (Entrez Gene) 99076_at
sf3a3GeneProduct446168 (Entrez Gene) 96029_at
si:busm1-160c18.6GeneProductENSDARG00000070206 (Ensembl)
  • 162346_f_at
  • hla-dma
sumo3bGeneProduct436950 (Entrez Gene) 95424_at
sumolGeneProduct406438 (Entrez Gene) 101091_at
tab2GeneProduct494163 (Entrez Gene) 160309_at
tob1aGeneProduct386629 (Entrez Gene) 99532_at
tubb4bGeneProductENSDARG00000002344 (Ensembl) 94835_f_at
ucp3GeneProductENSDARG00000091209 (Ensembl) 93392_at
ugp2bGeneProduct334420 (Entrez Gene) 94481_at
vapalGeneProduct436819 (Entrez Gene) 94889_at
zfrGeneProduct321659 (Entrez Gene) 104050_at

Annotated Interactions

No annotated interactions
Retrieved from "https://classic.wikipathways.org/index.php/Pathway:WP562"
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