GPCRs, class C metabotropic glutamate, pheromone (Bos taurus)

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ArcPathVisio Brace Ellipse EndoplasmicReticulum GolgiApparatus HexagonPathVisio MimDegradation Mitochondria Octagon PentagonPathVisio Rectangle RoundedRectangle SarcoplasmicReticulum TriangleEquilateralEast TrianglePathVisio none Metabotropic glutamateMetabotropic glutamate otherGABA-BOrphan GPRC5CASRGRM1GRM5GRM2GRM3GRM8GRM4GRM7GRM6Group objectGPRC5DGPRC5CGPRC5BGPRC5AGroup objectGABBR1GABBR2Group objectName: GPCRs, class C metabotropic glutamate, pheromoneOrganism: Bos taurus


Description

This pathway was created using the GPCRDB (Horn et al., 1998), http://www.gpcr.org/7tm/ (originally at http://www.cmbi.kun.nl/7tm/). The groupings are based on the GPCR phylogenetic tree available from the GPCRDB and the training sets used by Karchin et al. (Bioinformatics, 2002, pg. 147-159). The labels indicate children and grandchildren of the various classes of GPCRs as described by these references.

Comments

HomologyConvert 
This pathway was inferred from Homo sapiens pathway WP501(79715) with a 93.0% conversion rate.

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Quality Tags

Image:NonTypical.pngAnnotated lists
Image:Curated.pngApproved version
Image:MissingXref.pngAnnotate nodes
Homology Converted

Ontology Terms

 

Bibliography

  1. Horn F, Weare J, Beukers MW, Hörsch S, Bairoch A, Chen W, Edvardsen O, Campagne F, Vriend G; ''GPCRDB: an information system for G protein-coupled receptors.''; Nucleic Acids Res, 1998 PubMed Europe PMC Scholia
  2. Karchin R, Karplus K, Haussler D; ''Classifying G-protein coupled receptors with support vector machines.''; Bioinformatics, 2002 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
117528
Approved
view11:10, 21 May 2021EweitzModified title
80721view15:23, 30 June 2015Mkutmonhomology conversion
79161view05:12, 6 March 2015MaintBotadding ontology tag
79160view05:12, 6 March 2015MaintBottest
79159view05:11, 6 March 2015MaintBotUpdated conversion from Hs
63365view22:23, 9 May 2013MaintBotUpdated to 2013 gpml schema
40537view19:30, 1 March 2011MaintBotRemoved redundant pathway information and comments
33778view00:08, 9 December 2009MaintBotAutomatic update of empty xrefs
31686view11:45, 14 August 2009MaintBotFixed group labels
30620view22:22, 29 July 2009MaintBotNew pathway

External references

DataNodes

View all...
Name  ↓Type  ↓Database reference  ↓Comment  ↓
CASRGeneProductENSBTAG00000003865 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:846
GABBR1GeneProductENSBTAG00000017239 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2550
GABBR2GeneProductENSBTAG00000013810 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:9568
GPRC5AGeneProductENSBTAG00000039509 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:9052
GPRC5BGeneProductENSBTAG00000019596 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:51704
GPRC5CGeneProductENSBTAG00000018663 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:55890
GPRC5DGeneProductENSBTAG00000014288 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:55507
GRM1GeneProductENSBTAG00000044181 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2911
GRM2GeneProductENSBTAG00000001067 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2912
GRM3GeneProductENSBTAG00000018989 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2913
GRM4GeneProductENSBTAG00000013632 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2914
GRM5GeneProductENSBTAG00000048061 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2915
GRM6GeneProductENSBTAG00000016187 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2916
GRM7GeneProductENSBTAG00000013047 (Ensembl) HomologyConvert: Homo sapiens to Bos taurus: Original ID = L:2917
GRM8GeneProduct

Annotated Interactions

No annotated interactions
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