Camalexin synthesis (Arabidopsis thaliana)

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ArcPathVisio Brace Ellipse EndoplasmicReticulum GolgiApparatus HexagonPathVisio MimDegradation Mitochondria Octagon PentagonPathVisio Rectangle RoundedRectangle SarcoplasmicReticulum TriangleEquilateralEast TrianglePathVisio none CYP79B3CYP79B2TrpIAOxIANCYP71A13DHCACamalexinCYP71B15I3CO2HI3CO2GlcI3CO2MeMetaboliteMetaboliteI3CHOMetaboliteMetaboliteMetaboliteESPMetaboliteγGluCys(IAN)GlyDHCS methyl esterDHCA-GlnDHCA-Glu(31)(29)I3CO2Glc6-OH-I3CO2Glc6-GlcO-I3CO2HMyrosinasesMetaboliteMetaboliteMetaboliteMetaboliteMetaboliteCys(IAN)γGluCys(IAN)CYP71B15peptidasespeptidasesPCS ?MetaboliteI3CO2MeI3COAsp6-OH-I3CO2Glc6-GlcO-I3CO2HName: Camalexin synthesisOrganism: Arabidopsis thaliana


Description

Biosynthesis of camalezin from tryptophan and alternative paths found under stress situations.

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Quality Tags

Image:MissingXref.pngAnnotate nodes
Image:NeedsWork.pngNeeds work

Ontology Terms

 

Bibliography

  1. Böttcher C, Westphal L, Schmotz C, Prade E, Scheel D, Glawischnig E; ''The multifunctional enzyme CYP71B15 (PHYTOALEXIN DEFICIENT3) converts cysteine-indole-3-acetonitrile to camalexin in the indole-3-acetonitrile metabolic network of Arabidopsis thaliana.''; Plant Cell, 2009 PubMed Europe PMC Scholia
  2. Glawischnig E; ''Camalexin.''; Phytochemistry, 2007 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
89210view05:08, 23 August 2016EgonwOntology Term : 'metabolic pathway of secondary metabolites' added !
89154view03:10, 23 August 2016AriuttaOntology Term : 'classic metabolic pathway' added !
70201view04:49, 13 July 2013MaintBotupdated to 2013 schema
58927view06:59, 21 February 2013EgonwFixed the data source.
58571view20:49, 15 February 2013EgonwModified description
58570view20:40, 15 February 2013EgonwMore side chain metabolites
58569view20:01, 15 February 2013EgonwSome layout cleaning.
58568view20:00, 15 February 2013EgonwAdding structures from Fig 9.
58279view18:36, 11 February 2013MaintBotModified categories
58177view13:38, 9 February 2013EgonwAdded another CID.
58176view13:03, 9 February 2013EgonwAdded another reference
58175view12:52, 9 February 2013EgonwAdded a number of PubChem CIDs.
58174view12:35, 9 February 2013EgonwAdded the left branch (also without MB identifiers)
58173view11:48, 9 February 2013EgonwAdded the right branch (without identifiers)
58154view22:12, 8 February 2013EgonwMain branch done.
58150view22:03, 8 February 2013EgonwNew pathway

External references

DataNodes

View all...
Name  ↓Type  ↓Database reference  ↓Comment  ↓
(29)Metabolite69867 (PubChem-compound)
(31)Metabolite10256 (PubChem-compound)
6-GlcO-I3CO2HMetabolite
6-OH-I3CO2GlcMetabolite
CYP71A13GeneProduct817628 (Entrez Gene)
CYP71B15GeneProduct
CYP79B2GeneProduct830154 (Entrez Gene)
CYP79B3GeneProduct816765 (Entrez Gene)
CamalexinMetabolite636970 (PubChem-compound)
Cys(IAN)Metabolite
DHCAMetabolite
DHCA-GlnMetabolite
DHCA-GluMetabolite
DHCS methyl esterMetabolite
ESPGeneProduct
I3CHOMetabolite10256 (PubChem-compound)
I3CO2GlcMetabolite
I3CO2HMetabolite69867 (PubChem-compound)
I3CO2MeMetabolite589098 (PubChem-compound)
I3COAspMetabolite
IANMetabolite351795 (PubChem-compound)
IAOxMetabolite46173868 (PubChem-compound)
MetaboliteMetabolite
MetaboliteMetabolite19103337 (PubChem-compound)
MetaboliteMetabolite842006 (PubChem-compound)
MetaboliteMetabolite854040 (PubChem-compound)
MetaboliteMetabolite9576241 (PubChem-compound)
MyrosinasesGeneProduct
PCS ?GeneProduct
TrpMetabolite6305 (PubChem-compound)
peptidasesGeneProduct
γGluCys(IAN)Metabolite
γGluCys(IAN)GlyMetabolite

Annotated Interactions

No annotated interactions

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