Superpathway of pyridoxal 5'-phosphate biosynthesis and salvage (Solanum lycopersicum)

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ArcPathVisio Brace Ellipse EndoplasmicReticulum GolgiApparatus HexagonPathVisio MimDegradation Mitochondria Octagon PentagonPathVisio Rectangle RoundedRectangle SarcoplasmicReticulum TriangleEquilateralEast TrianglePathVisio none D-erythrose-4-phosphate1.2.1.72Pyridoxal 5'-phosphate (PLP) is the biochemically active formof pyridoxine 5'-phosphate (PNP)or vitamin B6. PLP is an essential cofactor of numerous metabolic enzymes, predominantly in amino acid metabolismerythronate-4-phosphate2-oxo-3-hydroxy-4-phosphobutanoate4-(phosphonooxy)-threonine(2S)-2-amino-3-oxo-4-phosphonooxybutanoate1-amino-propan-2-one-3-phosphateD-glyceraldehyde-3-phosphate1-deoxy-D-xylulose 5-phosphatepyridoxine-5'-phosphatepyridoxal 5'-phosphatepyridoxalpyridoxinepyridoxaminepyridoxamine 5'-phosphate2.6.1.521.1.1.262spontaneous2.2.1.71.1.1.2902.6.99.22.7.1.-2.7.1.351.4.3.51.4.3.52.7.1.35Name: Superpathway of pyridoxal 5'-phosphate biosynthesis and salvageOrganism: Solanum lycopersicum


Description

No description

Comments

 
Synonyms: vitamin B6 biosynthesis and salvage / This superpathway shows the various ways that E. coli can obtain pyridoxal 5'-phosphate, a coenzyme for many enzymes that participate in amino acid and glycogen metabolism.
 
This pathway has been manually created based on Lycocyc content

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Ontology Terms

 

Bibliography

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History

CompareRevisionActionTimeUserComment
107272view14:36, 17 September 2019MaintBotChEBI identifier normalization
87645view08:54, 25 July 2016MirellaKalafatiOntology Term : 'classic metabolic pathway' added !
73649view23:48, 11 February 2014LarsEijssenNew pathway

External references

DataNodes

View all...
Name  ↓Type  ↓Database reference  ↓Comment  ↓
(2S)-2-amino-3-oxo-4-phosphonooxybutanoateMetabolite441260 (PubChem-compound)
1-amino-propan-2-one-3-phosphate MetaboliteCHEBI:1449 (ChEBI)
1-deoxy-D-xylulose 5-phosphate MetaboliteCHEBI:16493 (ChEBI)
1.1.1.262GeneProduct1.1.1.262 (Enzyme Nomenclature)
1.1.1.290 GeneProduct1.1.1.290 (Enzyme Nomenclature)
1.2.1.72 GeneProduct1.2.1.72 (Enzyme Nomenclature)
1.4.3.5 GeneProduct1.4.3.5 (Enzyme Nomenclature)
2-oxo-3-hydroxy-4-phosphobutanoate MetaboliteCHEBI:27951 (ChEBI)
2.2.1.7 GeneProduct2.2.1.7 (Enzyme Nomenclature)
2.6.1.52 GeneProduct2.6.1.52 (Enzyme Nomenclature)
2.6.99.2 GeneProduct2.6.99.2 (Enzyme Nomenclature)
2.7.1.- GeneProduct2.7.1.- (Enzyme Nomenclature)
2.7.1.35 GeneProduct2.7.1.35 (Enzyme Nomenclature)
4-(phosphonooxy)-threonine MetaboliteCHEBI:18336 (ChEBI)
D-erythrose-4-phosphate MetaboliteCHEBI:48153 (ChEBI)
D-glyceraldehyde-3-phosphate MetaboliteCHEBI:17138 (ChEBI)
Pyridoxal 5'-phosphate (PLP) is the biochemically active form

of pyridoxine 5'-phosphate (PNP)or vitamin B6. PLP is an essential cofactor of numerous metabolic enzymes,

predominantly in amino acid metabolism
erythronate-4-phosphate MetaboliteCHEBI:49003 (ChEBI)
pyridoxal 5'-phosphate MetaboliteCHEBI:18405 (ChEBI)
pyridoxal MetaboliteCHEBI:17310 (ChEBI)
pyridoxamine 5'-phosphate MetaboliteCHEBI:18335 (ChEBI)
pyridoxamine MetaboliteCHEBI:16410 (ChEBI)
pyridoxine MetaboliteCHEBI:16709 (ChEBI)
pyridoxine-5'-phosphate MetaboliteCHEBI:28803 (ChEBI)
spontaneousGeneProduct

Annotated Interactions

No annotated interactions
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