exRNA mechanism of action and biogenesis (Homo sapiens)
From WikiPathways
Description
The process of RNA-interference in eukaryotic cells. Long precursor microRNA (miRNA), called pri-miRNA, is cleaved by RNase III endonuclease (Drosha) into pieces of approximately 70 nucleotides each (called pre-miRNA) in the nucleus. Following transportation into the cytoplasm by exportin 5 another RNase III endonuclease (Dicer) cleaves it into mature miRNA segments. Degradation of messenger RNA (mRNA) and translational repression occurs after miRNA binds to the RNA-induced silencing complex (RISC). Cytoplasmic long double-stranded RNA (dsRNA) is cleaved by Dicer into small interfering RNA (siRNA), which is incorporated into RISC, resulting in the cleavage and degradation of specific target mRNA. Synthetic double-stranded siRNA is not processed by Dicer and directly incorporated by the RISC.
After cleavage by Dicer, mature miRNAs can also be released out of cells in exosomes, microvesicles or apoptotic bodies, or bond to some high-density lipoprotein (HDL) and Argonaute protein 2 (Ago2). Viral miRNAs exported from the nucleus are processed in the same way.
Proteins on this pathway have targeted assays available via the CPTAC Assay PortalQuality Tags
Ontology Terms
Bibliography
- Thomas MF, L'Etoile ND, Ansel KM; ''Eri1: a conserved enzyme at the crossroads of multiple RNA-processing pathways.''; Trends Genet, 2014 PubMed Europe PMC Scholia
- Giza DE, Fuentes-Mattei E, Bullock MD, Tudor S, Goblirsch MJ, Fabbri M, Lupu F, Yeung SJ, Vasilescu C, Calin GA; ''Cellular and viral microRNAs in sepsis: mechanisms of action and clinical applications.''; Cell Death Differ, 2016 PubMed Europe PMC Scholia
- Ozpolat B, Sood AK, Lopez-Berestein G; ''Liposomal siRNA nanocarriers for cancer therapy.''; Adv Drug Deliv Rev, 2014 PubMed Europe PMC Scholia
History
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External references
DataNodes
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Name | Type | Database reference | Comment |
---|---|---|---|
AGO2 | GeneProduct | ENSG00000123908 (Ensembl) | |
DGCR8 | GeneProduct | ENSG00000128191 (Ensembl) | |
DICER1 | GeneProduct | 23405 (Entrez Gene) | |
Drosha | GeneProduct | 29102 (Entrez Gene) | |
ERI1 | GeneProduct | ENSG00000104626 (Ensembl) | |
HDL | Metabolite | CHEBI:39025 (ChEBI) | |
XPO5 | GeneProduct | 57510 (Entrez Gene) | |
dsRNA | Rna | ||
exo-siRNA | Rna | ||
miRNA | Rna | ||
pre-miRNA | Rna | ||
pri-miRNA | Rna | ||
siRNA | Rna |
Annotated Interactions
No annotated interactions