Allantoin degradation (Saccharomyces cerevisiae)
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Description
The allantoin degradation pathway, which converts allantoin to ammonia and carbon dioxide, allows S. cerevisiae to use allantoin as a sole nitrogen source. Conversion of allantoin to ammonia is carried out by the DAL1, DAL2, and DAL3 gene products, which work sequentially to generate urea (CITS: [3915539]). Urea is then degraded to ammonia in a two-step process by the DUR1,2 protein, a multifunctional single enzyme originally thought to be encoded by two tightly-linked genes (hence the name DUR1,2; (CITS: [6105114]). The allantoin catabolic pathway genes are regulated by a general signal that responds to the availability of readily utilizable nitrogen sources, and also by pathway-specific induction by allantoin or the intermediate allophanate. These regulatory effects are mediated by cis-acting DNA elements and the trans-acting factors Gln3p, Gat1p, Dal80p, Dal81p, and Dal82p (CITS: [10488154])(CITS: [12062797])(CITS: [10702289])(CITS: [7899074]).
SOURCE: SGD pathways, http://pathway.yeastgenome.org/server.html
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Ontology Terms
Bibliography
- Wong S, Wolfe KH; ''Birth of a metabolic gene cluster in yeast by adaptive gene relocation.''; Nat Genet, 2005 PubMed Europe PMC Scholia
- Cooper TG, Lam C, Turoscy V; ''Structural analysis of the dur loci in S. cerevisiae: two domains of a single multifunctional gene.''; Genetics, 1980 PubMed Europe PMC Scholia
- ''superpathway of allantoin degradation in yeast''; YeastPathways,
History
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External references
DataNodes
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Name ![]() | Type ![]() | Database reference ![]() | Comment ![]() |
---|---|---|---|
(S)-ureidoglycolate | Metabolite | CHEBI:57296 (ChEBI) ![]() | |
ADP | Metabolite | 58-64-0 (CAS) ![]() | |
ATP | Metabolite | 1927-31-7 (CAS) ![]() | |
CO2 | Metabolite | 16526 (ChEBI) ![]() | |
DAL1 | GeneProduct | S000001466 (SGD) ![]() | |
DAL2 | GeneProduct | S000001468 (SGD) ![]() | |
DAL3 | GeneProduct | S000001471 (SGD) ![]() | |
DUR1,2 | GeneProduct | S000000412 (SGD) ![]() | |
H+ | Metabolite | 15378 (ChEBI) ![]() | |
H2O | Metabolite | 15377 (ChEBI) ![]() | |
NH3 | Metabolite | 28938 (ChEBI) ![]() | |
allantoate | Metabolite | CHEBI:17536 (ChEBI) ![]() | |
allantoin | Metabolite | 97-59-6 (CAS) ![]() | |
glyoxylate | Metabolite | 36655 (ChEBI) ![]() | |
phosphate | Metabolite | 14265-44-2 (CAS) ![]() | |
urea-1-carboxylate | Metabolite | CHEBI:15832 (ChEBI) ![]() | |
urea | Metabolite | 57-13-6 (CAS) ![]() |
Annotated Interactions
No annotated interactions