Flavonoid pathway (Arabidopsis thaliana)

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ArcPathVisio Brace Ellipse EndoplasmicReticulum GolgiApparatus HexagonPathVisio MimDegradation Mitochondria Octagon PentagonPathVisio Rectangle RoundedRectangle SarcoplasmicReticulum TriangleEquilateralEast TrianglePathVisio none 6C-Glucosyl-2- hydroxynaringeninNaringenin chalconeCatalystIsoliquilitigeninLiquilitigeninCatalystNaringeninRXN-76522-Hydroxynaringenin6C-Glucosyl-2- hydroxynaringenin7,4'-Dihydroxyflavone2,7,4'-Trihydroxyiso- flavanone8C-Glucosyl-2,7,4'- trihydroxyisoflavanoneDaidzeinCatalystPuerarinApigenin2',4',5,7-Tetrahydroxy- isoflavanoneGenisteinCatalystPrunetinScutellareinEriodictyolCatalystIsovitexinSaponarinNaringenin 4'- O-glucosideDihydrokaempferolNARINGENIN-3- DIOXYGENASE-RXNdihydroquercetin, TaxifolinRXN-7775RXN-525RXN-600(+)-CatechinRXN-1484RXN-5273-O-MethylquercetinQUERCETIN-3-O-METHYL- TRANSFERASE-RXNLeucopelargonidinDIHYDROKAEMPFEROL- 4-REDUCTASE-RXNAfzelechinRXN-1481PelargonidinLEUCOPEL-RXNEpiafzelechinRXN-9724Name: Flavonoid pathwayOrganism: Arabidopsis thaliana


Description

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Quality Tags

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Ontology Terms

 

Bibliography

  1. Brazier-Hicks M, Evans KM, Gershater MC, Puschmann H, Steel PG, Edwards R; ''The C-glycosylation of flavonoids in cereals.''; J Biol Chem, 2009 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
101936view16:16, 18 November 2018EgonwRemoved "undefined" as data source.
97818view15:03, 9 June 2018EgonwUndo revision 97761 by [[Special:Contributions/Mick Eikelhof|Mick Eikelhof]] ([[User talk:Mick Eikelhof|Talk]]) Text cannot be copied from other websites.
97761view13:28, 7 June 2018Mick EikelhofModified description
96261view19:31, 2 March 2018EgonwRemoved empty data source / id.
87494view01:42, 25 July 2016AlexanderPicoOntology Term : 'classic metabolic pathway' added !
87493view01:42, 25 July 2016AlexanderPicoOntology Term : 'flavonoid biosynthetic pathway' added !
84659view06:44, 12 March 2016EgonwFixed data source for a PubChem compound.
84579view20:44, 3 March 2016Kozo2Quick edit to datanode annotation or property
84522view18:18, 28 February 2016Kozo2Quick edit to datanode annotation or property
84521view08:13, 28 February 2016Kozo2Quick edit to datanode annotation or property
84482view21:23, 25 February 2016Kozo2Quick edit to datanode annotation or property
84481view21:11, 25 February 2016Kozo2Quick edit to datanode annotation or property
84437view07:50, 24 February 2016EgonwQuick edit to datanode annotation or property
84436view07:47, 24 February 2016EgonwQuick edit to datanode annotation or property
84394view08:18, 19 February 2016Kozo2Quick edit to datanode annotation or property
84391view07:02, 19 February 2016Kozo2Quick edit to datanode annotation or property
83988view12:29, 8 January 2016EgonwWidened the labels to fit the text.
81874view12:47, 4 September 2015Kozo2check whether new bridgeDB works for KNApSAcK IDs
81792view06:44, 28 August 2015Kozo2add KNApSAcK IDs
81791view05:02, 28 August 2015Kozo2New pathway

External references

DataNodes

View all...
Name  ↓Type  ↓Database reference  ↓Comment  ↓
(+)-CatechinMetaboliteC06562 (KEGG Compound)
2',4',5,7-Tetrahydroxy- isoflavanoneMetabolite102056-04-2 (CAS)
2,7,4'-Trihydroxyiso- flavanoneMetaboliteC15567 (KEGG Compound)
2-HydroxynaringeninMetabolite58124-18-8 (CAS)
3-O-MethylquercetinMetabolite1486-70-0 (CAS)
6C-Glucosyl-2- hydroxynaringeninMetabolite90657396 (PubChem-compound)
6C-Glucosyl-2- hydroxynaringeninMetaboliteC00007280 (KNApSAcK)
7,4'-DihydroxyflavoneMetaboliteC12123 (KEGG Compound)
8C-Glucosyl-2,7,4'- trihydroxyisoflavanoneMetabolite
AfzelechinMetabolite2545-00-8 (CAS)
ApigeninMetabolite520-36-5 (CAS)
CatalystPathwayR01613 (SWISS-MODEL)
CatalystPathwayR02442 (SWISS-MODEL)
CatalystPathwayR06556 (SWISS-MODEL)
CatalystPathwayR06793 (SWISS-MODEL)
CatalystPathwayR07317 (SWISS-MODEL)
DIHYDROKAEMPFEROL- 4-REDUCTASE-RXNUnknownDIHYDROKAEMPFEROL-4-REDUCTASE-RXN (HGNC)
DaidzeinMetaboliteC10208 (KEGG Compound)
DihydrokaempferolMetaboliteC00974 (KEGG Compound)
EpiafzelechinMetabolite
EriodictyolMetabolite552-58-9 (CAS)
GenisteinMetaboliteC06563 (KEGG Compound)
IsoliquilitigeninMetaboliteC08650 (KEGG Compound)
IsovitexinMetabolite
LEUCOPEL-RXNUnknownLEUCOPEL-RXN (HGNC)
LeucopelargonidinMetabolite520-17-2 (CAS)
LiquilitigeninMetabolite
NARINGENIN-3- DIOXYGENASE-RXNUnknownNARINGENIN-3-DIOXYGENASE-RXN (HGNC)
Naringenin 4'- O-glucosideMetabolite81202-36-0 (CAS)
Naringenin chalconeMetabolite
NaringeninMetaboliteC00509 (KEGG Compound)
PelargonidinMetaboliteC05904 (KEGG Compound)
PrunetinMetabolite
PuerarinMetaboliteC10524 (KEGG Compound)
QUERCETIN-3-O-METHYL- TRANSFERASE-RXNUnknownQUERCETIN-3-O-METHYLTRANSFERASE-RXN (HGNC)
RXN-1481UnknownRXN-1481 (STRING)
RXN-1484UnknownRXN-1484 (STRING)
RXN-525UnknownRXN-525 (HGNC)
RXN-527UnknownRXN-527 (HGNC)
RXN-600UnknownRXN-600 (HGNC)
RXN-7652UnknownRXN-7652 (STRING)
RXN-7775UnknownRXN-7775 (STRING)
RXN-9724UnknownRXN-9724 (STRING)
SaponarinMetaboliteC08064 (KEGG Compound)
ScutellareinMetaboliteC10184 (KEGG Compound)
dihydroquercetin, TaxifolinMetaboliteC01617 (KEGG Compound)

Annotated Interactions

Source  ↓Target  ↓Type  ↓Database reference  ↓Comment  ↓
6C-Glucosyl-2- hydroxynaringeninIsovitexinArrowRXN-14076 (BioCyc)
Naringenin chalconeNaringenin 4'- O-glucosideArrowR08006 (KEGG Reaction)
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