Flowering time pathway (Brassica napus)

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BnaAP1A025C02A07aA07bC06aC06bBnaAP2A01A03C01CnaCnbBnaAGL19A01aC01aA01bC01bA03C07A08CnBnaLFYA06CnaCnbCncA037BnaSOC1A04A05C04aC04bCnBnaFDA01C01AnC07A08C03LegendActivation; Up-regulationInhibition; Down-regulationexpressed paralogFloweringBoltingBnTFL12AnA10CnC02BnaAGL24C01aA01C01bA039C074BnaSVPA04A099C04C089BnaFT2, 6A02C02bC02aC04A07C06BnaFLC1A02A03aA03bA10C02C03aC09aC09bC03bBnaFRI3A03A103, 4C03C09BnaGIA09C05BnaCOA10C09expressed paralog within FTi QTLC03A064A08C07BnaBBX19BindingBnaVIN3A0211C02A03C03BnaVRN1A01A038A05C03C01C05A03BnaTFL28C03A10C09AnTo be integrated: BnaFULA03A09C074AnC02CnaCnbwithin FTi QTLBnaSPL3A04C03C04A05CnBnaSPL9A04C04aA05C04bBnaSPL15A07C049C06A04aA04bA05BnaPIF4C01A04C03aC04C03bC08A0344BnaPhyCA05C06BnaPhyBA05C03C05BnaPhyEA01C019C04aA04A059C04bBnaPRR9C02A10AnCnBnaPRR7BnaPRR5A02C02A09C09A06C07BnaPRR3A02A10C099BnaVRN2A01A08A10C08aC01C08bBnaFLMBnaFKF1A07C02aC02bBnaTOC1C09CnBnaZTLA0210C07BnaCCA1A05C04BnaLHYC05BnaCDF1CnAnaA06AnbBnaCDF2A0410A07C06C04BnaCDF3CnAnC04A03interactive regulation


Description

This pathway shows the molecular pathway underlying flowering in rapeseed (Brassica napus).

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Quality Tags

Ontology Terms

 

Bibliography

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  1. Zou X, Suppanz I, Raman H, Hou J, Wang J, Long Y, Jung C, Meng J; ''Comparative analysis of FLC homologues in Brassicaceae provides insight into their role in the evolution of oilseed rape.''; PLoS One, 2012 PubMed Europe PMC Scholia
  2. Guo Y, Harloff H, Jung C, Molina C; ''Mutations in single FT- and TFL1-paralogs of rapeseed (Brassica napus L.) and their impact on flowering time and yield components.''; Front Plant Sci, 2014 PubMed Europe PMC Scholia
  3. Wang N, Qian W, Suppanz I, Wei L, Mao B, Long Y, Meng J, Müller AE, Jung C; ''Flowering time variation in oilseed rape (Brassica napus L.) is associated with allelic variation in the FRIGIDA homologue BnaA.FRI.a.''; J Exp Bot, 2011 PubMed Europe PMC Scholia
  4. Schiessl S, Iniguez-Luy F, Qian W, Snowdon RJ; ''Diverse regulatory factors associate with flowering time and yield responses in winter-type Brassica napus.''; BMC Genomics, 2015 PubMed Europe PMC Scholia
  5. Raman H, Raman R, Eckermann P, Coombes N, Manoli S, Zou X, Edwards D, Meng J, Prangnell R, Stiller J, Batley J, Luckett D, Wratten N, Dennis E; ''Genetic and physical mapping of flowering time loci in canola (Brassica napus L.).''; Theor Appl Genet, 2013 PubMed Europe PMC Scholia
  6. Wang J, Long Y, Wu B, Liu J, Jiang C, Shi L, Zhao J, King GJ, Meng J; ''The evolution of Brassica napus FLOWERING LOCUS T paralogues in the context of inverted chromosomal duplication blocks.''; BMC Evol Biol, 2009 PubMed Europe PMC Scholia
  7. Raman H, Raman R, Coombes N, Song J, Prangnell R, Bandaranayake C, Tahira R, Sundaramoorthi V, Killian A, Meng J, Dennis ES, Balasubramanian S; ''Genome-wide association analyses reveal complex genetic architecture underlying natural variation for flowering time in canola.''; Plant Cell Environ, 2016 PubMed Europe PMC Scholia
  8. Long Y, Shi J, Qiu D, Li R, Zhang C, Wang J, Hou J, Zhao J, Shi L, Park BS, Choi SR, Lim YP, Meng J; ''Flowering time quantitative trait Loci analysis of oilseed brassica in multiple environments and genomewide alignment with Arabidopsis.''; Genetics, 2007 PubMed Europe PMC Scholia
  9. Wang N, Chen B, Xu K, Gao G, Li F, Qiao J, Yan G, Li J, Li H, Wu X; ''Association Mapping of Flowering Time QTLs and Insight into Their Contributions to Rapeseed Growth Habits.''; Front Plant Sci, 2016 PubMed Europe PMC Scholia
  10. Shi J, Li R, Qiu D, Jiang C, Long Y, Morgan C, Bancroft I, Zhao J, Meng J; ''Unraveling the complex trait of crop yield with quantitative trait loci mapping in Brassica napus.''; Genetics, 2009 PubMed Europe PMC Scholia
  11. Nelson MN, Rajasekaran R, Smith A, Chen S, Beeck CP, Siddique KH, Cowling WA; ''Quantitative trait loci for thermal time to flowering and photoperiod responsiveness discovered in summer annual-type Brassica napus L.''; PLoS One, 2014 PubMed Europe PMC Scholia
  12. Guo AY, Zhu QH, Gu X, Ge S, Yang J, Luo J; ''Genome-wide identification and evolutionary analysis of the plant specific SBP-box transcription factor family.''; Gene, 2008 PubMed Europe PMC Scholia

History

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CompareRevisionActionTimeUserComment
128706view22:08, 20 February 2024EgonwModern Uniprot data source name
117470view10:58, 21 May 2021EweitzModified title
105012view08:12, 28 June 2019FehrhartOntology Term : 'signaling pathway' added !
105011view08:11, 28 June 2019FehrhartModified description
105010view08:09, 28 June 2019Fehrhartconnected lines
98481view00:54, 11 September 2018AlexanderPicoNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
A01 GeneProductBnaA01g08940D (Other) Bna.AP1.A2
A01 GeneProductBnaA01g12700D (Uniprot-TrEMBL) Bna.AP1.A2
A01 GeneProductBnaA01g13920D (Other) Bna.AP1.A2
A01GeneProductBnaA01g01640D (Other) Bna.AP1.A2
A01GeneProductBnaA01g18110D (Other) Bna.AP1.A2
A01GeneProductBnaA01g26330D (Other) Bna.AP1.A2
A01aGeneProductBnaA01g12700D (Other) Bna.AP1.A2
A01bGeneProductBnaA01g12710D (Other) Bna.AP1.A2
A02 GeneProductBnaA02g06500D (Other) Bna.AP1.A2
A02 GeneProductBnaA02g08140D (Other) Bna.AP1.A2
A02 GeneProductBnaA02g16710D (Other) Bna.AP1.A2
A02GeneProductBnaA02g00370D (Other) Bna.AP1.A2
A02GeneProductBnaA02g12130D (Other) Bna.AP1.A2
A02GeneProductBnaA02g32550D (Other) Bna.AP1.A2
A02GeneProductBnaA02g35830D (Other) Bna.AP1.A2
A03 GeneProductBnaA03g10310D (Other) Bna.AP1.A2
A03 GeneProductBnaA03g13320D (Other) Bna.AP1.A2
A03 GeneProductBnaA03g35020D (Other) Bna.AP1.A2
A03 GeneProductBnaA03g39820D (Other) Bna.AP1.A2
A03 GeneProductBnaA03g40160D (Other) Bna.AP1.A2
A03GeneProductBnaA03g06690D (Other) Bna.AP1.A2
A03GeneProductBnaA03g19970D (Other) Bna.AP1.A2
A03GeneProductBnaA03g45650D (Other) Bna.AP1.A2
A03GeneProductBnaA03g46780D (Other) Bna.AP1.A2
A03GeneProductBnaA03g53830D (Other) Bna.AP1.C2
A03GeneProductBnaA03g56880D (Other) Bna.AP1.A2
A03a GeneProductBnaA03g02820D (Other) Bna.AP1.A2
A03bGeneProductBnaA03g13630D (Other) Bna.AP1.A2
A04 GeneProductBnaA04g09490D (Uniprot-TrEMBL) Bna.AP1.A2
A04 GeneProductBnaA04g19840D (Uniprot-TrEMBL) Bna.AP1.A2
A04 GeneProductBnaA04g24340D (Uniprot-TrEMBL) Bna.AP1.A2
A04 GeneProductBnaA04g24760D (Other) Bna.AP1.A2
A04 GeneProductBnaA04g26750D (Other) Bna.AP1.A2
A04GeneProductBnaA04g12990D (Other) Bna.AP1.A2
A04GeneProductBnaA04g26320D (Other) Bna.AP1.A2
A04a GeneProductBnaA04g27550D (Other) Bna.AP1.A2
A04bGeneProductBnaA04g27550D (Other) Bna.AP1.A2
A05 GeneProductBnaA05g01050D (Other) Bna.AP1.A2
A05 GeneProductBnaA05g01090D (Other) Bna.AP1.A2
A05 GeneProductBnaA05g02680D (Other) Bna.AP1.A2
A05 GeneProductBnaA05g09840D (Other) Bna.AP1.A2
A05 GeneProductBnaA05g12750D (Other) Bna.AP1.A2
A05 GeneProductBnaA05g22950D (Other) Bna.AP1.A2
A05GeneProductBnaA05g02680D (Other) Bna.AP1.A2
A05GeneProductBnaA05g05010D (Other) Bna.AP1.A2
A05GeneProductBnaA05g21140D (Other) Bna.AP1.A2
A06 GeneProductBnaA06g21870D (Other) Bna.AP1.A2
A06 GeneProductBnaA06g37240D (Other) Bna.AP1.A2
A06 GeneProductBnaA06g39070D (Other) Bna.AP1.A2
A06GeneProductBnaA06g26980D (Other) Bna.AP1.A2
A07 GeneProductBnaA07g01240D (Other) Bna.AP1.A2
A07 GeneProductBnaA07g17550D (Uniprot-TrEMBL) Bna.AP1.A2
A07GeneProductBnaA07g14740D (Other) Bna.AP1.C2
A07GeneProductBnaA07g25310D (Other) Bna.AP1.A2
A07aGeneProductBnaA07g24360D (Other) Bna.AP1.A2
A07b GeneProductBnaA07g27710D (Other) Bna.AP1.A2
A08 GeneProductBnaA08g08130D (Other) Bna.AP1.A2
A08 GeneProductBnaA08g16830D (Other) Bna.AP1.A2
A08GeneProductBnaA08g10540D (Other) Bna.AP1.A2
A08GeneProductBnaA08g14840D (Other) Bna.AP1.A2
A09 GeneProductBnaA09g05500D (Other) Bna.AP1.A2
A09 GeneProductBnaA09g30390D (Other) Bna.AP1.A2
A09 GeneProductBnaA09g42480D (Other) Bna.AP1.A2
A09GeneProductBnaA09g04840D (Other) Bna.AP1.A2
A10 GeneProductBnaA10g05850D (Other) Bna.AP1.A2
A10 GeneProductBnaA10g08150D (Other) Bna.AP1.A2
A10 GeneProductBnaA10g12930D (Other) Bna.AP1.A2
A10 GeneProductBnaA10g18430D (Other) Bna.AP1.A2
A10 GeneProductBnaA10g26930D (Other) Bna.AP1.A2
A10GeneProductBnaA10g17060D (Other) Bna.AP1.A2
A10GeneProductBnaA10g22080D (Other) Bna.AP1.A2
A10GeneProductBnaA10g26300D (Other) Bna.AP1.A2
An GeneProductBnaAnng00500D (Other) Bna.AP1.A2
An GeneProductBnaAnng00810D (Other) Bna.AP1.A2
An GeneProductBnaAnng06660D (Other) Bna.AP1.A2
AnGeneProductBnaAnng08290D (Other) Bna.AP1.A2
AnGeneProductBnaAnng15950D (Other) Bna.AP1.A2
AnGeneProductBnaAnng22720D (Other) Bna.AP1.C2
AnaGeneProductBnaAnng24480D (Other) Bna.AP1.C2
AnbGeneProductBnaAnng29770D (Other) Bna.AP1.A2
C01 GeneProductBnaC01g01710D (Other) Bna.AP1.A2
C01 GeneProductBnaC01g40810D (Other) Bna.AP1.A2
C01GeneProductBnaC01g02720D (Other) Bna.AP1.A2
C01GeneProductBnaC01g21540D (Other) Bna.AP1.A2
C01GeneProductBnaC01g33680D (Other) Bna.AP1.A2
C01GeneProductBnaC01g40470D (Other) Bna.AP1.A2
C01a GeneProductBnaC01g14430D (Other) Bna.AP1.A2
C01aGeneProductBnaC01g16370D (Other) Bna.AP1.A2
C01bGeneProductBnaC01g14440D (Other) Bna.AP1.A2
C01bGeneProductBnaC01g16360D (Other) Bna.AP1.A2
C02 GeneProductBnaC02g03470D (Other) Bna.AP1.A2
C02 GeneProductBnaC02g11530D (Other) Bna.AP1.A2
C02 GeneProductBnaC02g41870D (Other) Bna.AP1.A2
C02GeneProductBnaC02g00490D (Other) Bna.AP1.A2
C02GeneProductBnaC02g02900D (Other) Bna.AP1.A2
C02GeneProductBnaC02g44500D (Other) Bna.AP1.C2
C02GeneProductBnaC02g48700D (Other) Bna.AP1.A2
C02a GeneProductAT5G65080 (Other) Bna.AP1.A2
C02a GeneProductBnaC02g45250D (Other) Bna.AP1.A2
C02b GeneProductBnaC02g23820 (Other) Bna.AP1.A2
C02bGeneProductAT5G65070 (Other) Bna.AP1.A2
C03 GeneProductBnaC03g12980D (Other) Bna.AP1.A2
C03 GeneProductBnaC03g16130D (Other) Bna.AP1.A2
C03 GeneProductBnaC03g39830D (Other) Bna.AP1.A2
C03 GeneProductBnaC03g60270D (Other) Bna.AP1.A2
C03 GeneProductBnaC03g76870D (Other) Bna.AP1.A2
C03GeneProductBnaC03g08560D (Other) Bna.AP1.A2
C03GeneProductBnaC03g18800D (Other) Bna.AP1.C2
C03GeneProductBnaC03g40730D (Other) Bna.AP1.A2
C03aGeneProductBnaC03g04170D (Other) Bna.AP1.A2
C03aGeneProductBnaC03g05370D (Other) Bna.AP1.A2
C03b GeneProductBnaC03g16530 (Other) Bna.AP1.A2
C03bGeneProductBnaC03g23970D (Other) Bna.AP1.A2
C04 GeneProductBnaC04g06760D (Other) Bna.AP1.A2
C04 GeneProductBnaC04g14580 (Other) Bna.AP1.A2
C04 GeneProductBnaC04g31720D (Other) Bna.AP1.A2
C04 GeneProductBnaC04g35060D (Other) Bna.AP1.A2
C04 GeneProductBnaC04g44230D (Other) Bna.AP1.A2
C04GeneProductBnaC04g00590D (Other) Bna.AP1.A2
C04GeneProductBnaC04g23930D (Other) Bna.AP1.C2
C04GeneProductBnaC04g48630D (Other) Bna.AP1.A2
C04a GeneProductBnaC04g51630D (Other) Bna.AP1.A2
C04aGeneProductBnaC04g48150D (Other) Bna.AP1.C2
C04aGeneProductBnaC04g50370D (Other) Bna.AP1.A2
C04bGeneProductBnaC04g00640D (Other) Bna.AP1.A2
C04bGeneProductBnaC04g02520D (Other) Bna.AP1.A2
C04bGeneProductBnaC04g53290D (Other) Bna.AP1.A2
C05 GeneProductBnaC05g00840D (Other) Bna.AP1.A2
C05 GeneProductBnaC05g18020D (Other) Bna.AP1.A2
C05 GeneProductBnaC05g36390D (Other) Bna.AP1.A2
C05GeneProductBnaC05g34060D (Other) Bna.AP1.A2
C06 GeneProductBnaC06g11890D (Other) Bna.AP1.A2
C06 GeneProductBnaC06g12530D (Other) Bna.AP1.A2
C06 GeneProductBnaC06g16200D (Other) Bna.AP1.A2
C06GeneProductBnaC06g27090D (Other) Bna.AP1.A2
C06aGeneProductBnaC06g25500D (Other) Bna.AP1.A2
C06bGeneProductBnaC06g29980D (Other) Bna.AP1.A2
C07 GeneProductBnaC07g29960D (Other) Bna.AP1.A2
C07 GeneProductBnaC07g47480D (Other) Bna.AP1.A2
C07 GeneProductBnaC07g49790D (Other) Bna.AP1.A2
C07GeneProductBnaC07g02630D (Other) Bna.AP1.A2
C07GeneProductBnaC07g37750D (Other) Bna.AP1.A2
C07GeneProductBnaC07g38990D (Other) Bna.AP1.A2
C07GeneProductBnaC07g45850D (Other) Bna.AP1.A2
C08 GeneProductBnaC08g34920D (Other) Bna.AP1.A2
C08GeneProductBnaC08g29580D (Other) Bna.AP1.A2
C08aGeneProductBnaC08g10770D (Other) Bna.AP1.A2
C08bGeneProductBnaC08g48270D (Other) Bna.AP1.A2
C09 GeneProductBnaC09g05250D (Other) Bna.AP1.A2
C09 GeneProductBnaC09g27290D (Other) Bna.AP1.A2
C09 GeneProductBnaC09g41990D (Other) Bna.AP1.A2
C09GeneProductBnaC09g04380D (Other) Bna.AP1.A2
C09GeneProductBnaC09g35410D (Other) Bna.AP1.A2
C09GeneProductBnaC09g40240D (Other) Bna.AP1.A2
C09aGeneProductBnaC09g46500D (Other) Bna.AP1.A2
C09b GeneProductBnaC09g46540D (Other) Bna.AP1.A2
Cn GeneProductBnaCnng15140D (Uniprot-TrEMBL) Bna.AP1.A2
Cn GeneProductBnaCnng29230D (Other) Bna.AP1.A2
Cn GeneProductBnaCnng61810D (Uniprot-TrEMBL) Bna.AP1.A2
CnGeneProductBnaCnng03230D (Other) Bna.AP1.A2
CnGeneProductBnaCnng05200D (Other) Bna.AP1.A2
CnGeneProductBnaCnng10680D (Other) Bna.AP1.A2
CnGeneProductBnaCnng36880D (Other) Bna.AP1.A2
CnGeneProductBnaCnng43250D (Other) Bna.AP1.A2
Cna GeneProductBnaCnng24550D (Other) Bna.AP1.A2
Cna GeneProductBnaCnng39690D (Other) Bna.AP1.A2
Cna GeneProductBnaCnng52780D (Other) Bna.AP1.A2
Cnb GeneProductBnaCnng52790D (Other) Bna.AP1.A2
Cnb GeneProductBnaCnng78420D (Other) Bna.AP1.A2
CnbGeneProductBnaCnng71740D (Other) Bna.AP1.A2
CncGeneProductBnaCnng78500D (Other) Bna.AP1.A2

Annotated Interactions

No annotated interactions

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