Phosphatidic acid and phospholipid biosynthesis (Saccharomyces cerevisiae)

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Description

All major phospholipid classes in yeast may trace their synthesis to a common precursor: cytidine diphosphate diacylglycerol (CDP-DAG). CDP-DAG is synthesized in a reaction catalyzed by CDP-DAG synthase, which converts phosphatidic acid (PA) to CDP-DAG using cytidine triphosphate (CTP) as the CDP donor. There are two distinct CDP-DAG synthases in S. cerevisiae: Cds1p, localized in the endoplasmic reticulum (ER), and Tam41p, localized in the mitochondrial matrix. In the ER, CDP-DAG generated by Cds1p can be converted to phosphatidylinositol (PI) or phosphatidylserine (PS) via PI synthase (Pis1p) or PS synthase (Cho1p), respectively. In the mitochondrion, CDP-DAG generated by Tam41p can be sequentially converted to phosphatidylglycerol (PG), which can be further converted to cardiolipin. Synthesis of PI, PG, and cardiolipin occurs through similar mechanisms in mammalian cells; however, unlike yeast, mammals primarily synthesize PS from other phospholipids and not from CDP-DAG. Source: https://pathway.yeastgenome.org/

Comments

GenMAPP remarks 
Based on http://pathway.yeastgenome.org/biocyc/

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Quality Tags

Ontology Terms

 

Bibliography

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History

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CompareRevisionActionTimeUserComment
135643view18:36, 8 October 2024KhanspersModified description
117324view11:47, 20 May 2021EweitzModified title
107026view13:48, 17 September 2019MaintBotHMDB identifier normalization
89532view11:05, 16 September 2016Mkutmonontology tag fix
89489view13:39, 15 September 2016Mkutmonremove space from ontology term id
71340view18:01, 17 October 2013MaintBotAutomated update of data sources
69589view20:30, 8 July 2013MaintBotUpdated to 2013 gpml schema
67594view11:30, 26 June 2013DdiglesOntology Term : 'glycerophospholipid metabolic pathway' added !
58984view19:34, 21 February 2013MaintBotUpdated Ensembl and UniProt data source
48286view23:42, 17 May 2012KhanspersUpdating PubChem xrefs
48283view23:39, 17 May 2012MaintBotAutomatic update of PubChem xrefs
41815view04:49, 2 March 2011MaintBotRemoved redundant pathway information and comments
36636view22:35, 9 April 2010MaintBotDescription and bibliography added from SGD
34362view22:30, 9 December 2009MaintBotAutomatic update of empty xrefs
29898view12:02, 9 June 2009Thomasupdated ensembl references
27494view23:30, 2 January 2009CarolineMrejenPeriodical save, work in progress
27482view01:13, 31 December 2008CarolineMrejenPeriodical save, work in progress
27480view01:03, 31 December 2008CarolineMrejenPeriodical save, work in progress
27478view00:52, 31 December 2008CarolineMrejenPeriodical save, work in progress
27281view22:59, 23 December 2008CarolineMrejenPeriodical save, work in progress
27276view21:30, 23 December 2008CarolineMrejenPeriodical save, work in progress
27269view20:14, 23 December 2008CarolineMrejenPeriodical save, work in progress
27214view02:20, 23 December 2008CarolineMrejenPeriodical save, work in progress
27208view00:17, 23 December 2008CarolineMrejenPeriodical save, work in progress
27206view00:06, 23 December 2008CarolineMrejenPeriodical save, work in progress
27204view23:56, 22 December 2008CarolineMrejenPeriodical save, work in progress
27202view23:46, 22 December 2008CarolineMrejenPeriodical save, work in progress
27200view23:36, 22 December 2008CarolineMrejenPeriodical save, work in progress
27194view21:56, 22 December 2008CarolineMrejenPeriodical save, work in progress
27192view21:46, 22 December 2008CarolineMrejenPeriodical save, work in progress
21672view11:32, 14 November 2008MaintBot[[Pathway:Saccharomyces cerevisiae:Phosphatidic Acid and Phospholipid Biosynthesis]] moved to [[Pathway:WP472]]: Moved to stable identifier
12816view08:03, 17 May 2008MaintBotautomated metabolite conversion
8882view14:11, 7 January 2008MaintBotAdded to category $category
8880view14:11, 7 January 2008M.BraymerUploaded new pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
1,2 diacylglycerolMetaboliteC00641 (KEGG Compound)
AYR1GeneProductS000001386 (SGD)
CDP-1,2-DiacylglycerolMetaboliteC00269 (KEGG Compound)
CDP-cholineMetabolite987-78-0 (CAS)
CDS1GeneProductS000000233 (SGD)
CHO1GeneProductS000000828 (SGD)
CHO2GeneProductS000003389 (SGD)
CPT1GeneProductS000005074 (SGD)
CRD1GeneProductS000002301 (SGD)
CTPMetaboliteC00063 (KEGG Compound)
GPT2GeneProduct853941 (Entrez Gene)
Glycerol-3-PhosphateMetaboliteHMDB0000126 (HMDB)
H2OMetaboliteHMDB0002111 (HMDB)
L-1-phosphatidyl-ethanolamineMetabolite2644-64-6 (CAS)
L-serineMetabolite56-45-1 (CAS)
LPP1GeneProductYDR503C (Ensembl)
MetaboliteMetaboliteC03372 (KEGG Compound)
NADPHMetaboliteHMDB0000221 (HMDB)
NADPMetaboliteHMDB0000217 (HMDB)
OPI3GeneProductS000003834 (SGD)
PAH1GeneProductYMR165C (Ensembl)
PGS1GeneProductS000000510 (SGD)
PSD1GeneProductS000005113 (SGD)
PSD2GeneProductS000003402 (SGD)
PhosphateMetabolite1061 (PubChem-compound)
SCT1GeneProduct852271 (Entrez Gene)
SLC1GeneProductS000002210 (SGD)
glycerolMetabolite56-81-5 (CAS)
lysophosphatidic acidMetabolite5497152 (PubChem-compound)
phosphateMetabolite14265-44-2 (CAS)
phosphatidic acidMetabolite5287505 (PubChem-compound)
pyrophosphateMetabolite2466-09-3 (CAS)

Annotated Interactions

No annotated interactions
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