UDP-derived sugars synthesis in fibroblasts (Homo sapiens)
From WikiPathways
Description
One of the main roles of fibroblasts is the secretion of the extracellular matrix components such as glycosaminoglycans (GAGs). This pathway describes the synthesis of GAGs precursors - five UDP-derived sugars (UDP-α-D-galactose, UDP-α-D-glucuronate, UDP-α-D-xylose, UDP-N-acetyl-α-D-galactosamine, UDP-N-α-alpha-D-glucosamine). It takes place in the cytosol, where it starts with the conversion of D-glucopyranose to D-glucopyranose 6-phosphate, after which it can either proceed via a shorter or a longer path. The shorter leads to the synthesis of UDP-α-D-galactose, UDP-α-D-glucuronate and UDP-α-D-xylose, while the longer leads to the synthesis of UDP-N-acetyl-α-D-galactosamine and UDP-N-acetyl-α-D-glucosamine. Some of the enzymes are missing in the pathway and can be a subject for future research.
This pathway was created based on the pathway information from the MetaCyc database (see Bibliography).
Quality Tags
Ontology Terms
Bibliography
View all... |
- Caspi R, Billington R, Keseler IM, Kothari A, Krummenacker M, Midford PE, Ong WK, Paley S, Subhraveti P, Karp PD; ''The MetaCyc database of metabolic pathways and enzymes - a 2019 update.''; Nucleic Acids Res, 2020 PubMed Europe PMC Scholia
- Huang YF, Mizumoto S, Fujita M; ''Novel Insight Into Glycosaminoglycan Biosynthesis Based on Gene Expression Profiles.''; Front Cell Dev Biol, 2021 PubMed Europe PMC Scholia
- Casale J, Crane JS; ''Biochemistry, Glycosaminoglycans''; https://www.ncbi.nlm.nih.gov/books/NBK544295/#:~:text=The%20process%20of%20GAG%20biosynthesis,and%20UDP%2DN%2Dacetylgalactosamine., 2023
- Caspi R; ''Pathway: UDP-α-D-glucuronate biosynthesis (from UDP-glucose)''; https://metacyc.org/META/NEW-IMAGE?type=PATHWAY&object=PWY-7346, 2013
- Keseler I; ''Pathway: UDP-N-acetyl-D-glucosamine biosynthesis I''; https://metacyc.org/META/NEW-IMAGE?type=PATHWAY&object=UDPNAGSYN-PWY, 2007
- Fulcher CA, Ying HC; ''Pathway: UDP-N-acetyl-D-glucosamine biosynthesis II''; https://metacyc.org/META/NEW-IMAGE?type=PATHWAY&object=UDPNACETYLGALSYN-PWY, 2007
- Tissier C; ''Pathway: UDP-α-D-xylose biosynthesis''; https://metacyc.org/META/NEW-IMAGE?type=PATHWAY&object=PWY-4821&ENZORG=NIL, 2005
- Caspi R; ''Pathway: UDP-α-D-galactose biosynthesis''; https://metacyc.org/META/NEW-IMAGE?type=PATHWAY&object=PWY-7344&ENZORG=TAX-9606, 2013
- Fulcher CA; ''Pathway: UDP-N-acetyl-D-galactosamine biosynthesis I''; https://metacyc.org/META/NEW-IMAGE?type=PATHWAY&object=PWY-5512&ENZORG=TAX-9606, 2007
- Caspi R, Fulcher CA; ''Pathway: UDP-N-acetyl-D-galactosamine biosynthesis II''; https://metacyc.org/META/NEW-IMAGE?type=PATHWAY&object=PWY-5514, 2007
- Caspi R; ''Pathway: UDP-N-acetyl-D-galactosamine biosynthesis III''; https://metacyc.org/META/NEW-IMAGE?type=PATHWAY&object=PWY-8013, 2018
History
View all... |
External references
DataNodes
View all... |
Name | Type | Database reference | Comment |
---|---|---|---|
D-galactosamine 6-phosphate | Metabolite | 71674 (ChEBI) | |
D-glucopyranose 6-phosphate | Metabolite | 4170 (ChEBI) | |
D-glucopyranose | Metabolite | 4167 (ChEBI) | |
D-glucosamine 6-phosphate | Metabolite | 58725 (ChEBI) | |
GALE | GeneProduct | ENSG00000117308 (Ensembl) | |
GCK | GeneProduct | ENSG00000106633 (Ensembl) | |
GFPT1 | GeneProduct | ENSG00000198380 (Ensembl) | |
GPI | GeneProduct | ENSG00000105220 (Ensembl) | |
HK1 | GeneProduct | ENSG00000156515 (Ensembl) | |
HK2 | GeneProduct | ENSG00000159399 (Ensembl) | |
HK3 | GeneProduct | ENSG00000160883 (Ensembl) | |
N-acetyl-α-D-galactosamine 1-phosphate | Metabolite | 61970 (ChEBI) | |
N-acetyl-α-D-glucosamine 1-phosphate | Metabolite | 57776 (ChEBI) | |
N-acetyl-α-D-glucosamine 6-phosphate | Metabolite | 57513 (ChEBI) | |
PGM1 | GeneProduct | ENSG00000079739 (Ensembl) | |
PGM3 | GeneProduct | ENSG00000013375 (Ensembl) | |
UDP-N-acetyl-α-D-galactosamine | Metabolite | 67138 (ChEBI) | |
UDP-N-acetyl-α-D-glucosamine | Metabolite | 57705 (ChEBI) | |
UDP-α-D-galactose | Metabolite | 66914 (ChEBI) | |
UDP-α-D-glucose | Metabolite | 58885 (ChEBI) | |
UDP-α-D-glucuronate | Metabolite | 58052 (ChEBI) | |
UDP-α-D-xylose | Metabolite | 57632 (ChEBI) | |
UGDH | GeneProduct | ENSG00000109814 (Ensembl) | |
UXS1 | GeneProduct | ENSG00000115652 (Ensembl) | |
α-D-galactosamine 1-phosphate | Metabolite | 142399 (ChEBI) | |
α-D-glucosamine 1-phosphate | Metabolite | 58516 (ChEBI) | |
α-D-glucose 6-phosphate | Metabolite | 58225 (ChEBI) | |
β-D-fructofuranose 6-phosphate | Metabolite | 57634 (ChEBI) |
Annotated Interactions
No annotated interactions