Thread:Welcome to WikiPathways (11)

From WikiPathways

a fragment of a discussion from User talk:Nsompairac
Jump to: navigation, search

Dear Mirella,

As I am mostly working with CellDesigner format maps, I was wondering if you are aware of any converter taking SBML/XML CellDesigner files and converting them into a GPML format?

Kind regards,

Nicolas

Hi Mirella and Nicolas.

I'm having the same issue regarding the conversion of CellDesigner to GPML. Did you manage to find a converter?

Best regards,

Luiz

Hi Mirella and Nicolas.

I'm having the same issue regarding the conversion of CellDesigner to GPML. Did you manage to find a converter?

Best regards,

Luiz

Hi Mirella and Nicolas.

I'm having the same issue regarding the conversion of CellDesigner to GPML. Did you manage to find a converter?

Best regards,

Luiz

Sorry for the repeated messages. I don't know how to exclude them =s

←In reply to Welcome to WikiPathways (11) by Nsompairac, above:

Hi Nicolas and Mirella,

I just realized that the MINERVA platform can export as GPML format the files that were uploaded there as CellDesigner SBML. So I think this solves this issue.

Here is the link: https://minerva.pages.uni.lu/doc/

And for the paper: https://academic.oup.com/bib/article/21/4/1249/5527141

Cheers,

Luiz

Retrieved from "https://classic.wikipathways.org/index.php/Thread:Welcome_to_WikiPathways_%2811%29"
Personal tools