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(New page: You can download the WikiPathways RDF from [http://rdf.wikipathways.org/ here].)
Current revision (11:28, 18 October 2019) (view source)
 
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You can download the WikiPathways RDF from [http://rdf.wikipathways.org/ here].
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The Semantic Web WikiPathways comes in two flavors: as RDF (beta) and as nanopublications (very experimental).
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== The RDF ==
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You can download the WikiPathways RDF from [http://data.wikipathways.org/current/rdf/ here].
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The WikiPathways RDF is split in two parts, the GPMLRDF part which contains a direct translation of the
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content in the GPML files, and a WPRDF part which contains harmonized biological information present in the GPML.
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This figure from [http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004989 the 2016 paper] shows how the WPRDF can be derived from the GPMLRDF:
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[[Image:Journal.pcbi.1004989.g001.jpg|700px]]

Current revision

The Semantic Web WikiPathways comes in two flavors: as RDF (beta) and as nanopublications (very experimental).

The RDF

You can download the WikiPathways RDF from here.

The WikiPathways RDF is split in two parts, the GPMLRDF part which contains a direct translation of the content in the GPML files, and a WPRDF part which contains harmonized biological information present in the GPML.

This figure from the 2016 paper shows how the WPRDF can be derived from the GPMLRDF:

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