Portal:Semantic Web/Downloads

From WikiPathways

(Difference between revisions)
Jump to: navigation, search
Current revision (11:28, 18 October 2019) (view source)
 
(One intermediate revision not shown.)
Line 6: Line 6:
The WikiPathways RDF is split in two parts, the GPMLRDF part which contains a direct translation of the
The WikiPathways RDF is split in two parts, the GPMLRDF part which contains a direct translation of the
-
content in the GPML files, and a WPRDF part which contains the biology represented in the GPML.
+
content in the GPML files, and a WPRDF part which contains harmonized biological information present in the GPML.
This figure from [http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004989 the 2016 paper] shows how the WPRDF can be derived from the GPMLRDF:
This figure from [http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1004989 the 2016 paper] shows how the WPRDF can be derived from the GPMLRDF:
-
[[Image:Journal.pcbi.1004989.g001.jpg|500px]]
+
[[Image:Journal.pcbi.1004989.g001.jpg|700px]]

Current revision

The Semantic Web WikiPathways comes in two flavors: as RDF (beta) and as nanopublications (very experimental).

The RDF

You can download the WikiPathways RDF from here.

The WikiPathways RDF is split in two parts, the GPMLRDF part which contains a direct translation of the content in the GPML files, and a WPRDF part which contains harmonized biological information present in the GPML.

This figure from the 2016 paper shows how the WPRDF can be derived from the GPMLRDF:

Personal tools