Portal:COVID-19/CoveredPWs

From WikiPathways

(Difference between revisions)
Jump to: navigation, search
Current revision (17:32, 18 March 2021) (view source)
(updated download link)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
{| class="wikitable sortable" style="float:left; margin-left: 10px;"
+
=== Pathway Collection ===
-
! Title || Comment || Links WP || Category || Status
+
All pathways tagged with "Curation: COVID-19" will be linked to this [https://www.wikipathways.org/index.php?title=Special:CurationTags&showPathwaysFor=Curation%3ACOVID19 overview table], to help keep track of the relevant pathways.
-
|-
+
-
| SARS-CoV-2 and COVID-19 Pathway|| Collaborative project for curation of biological processes <br/> involved in the COVID-19 disease after SARS-Cov-2 infection.  || [https://www.wikipathways.org/index.php/Pathway:WP4846 WP4846] || SARS-CoV-2 Pathways || style="font-style: italic; color: blue;" | Approved
+
-
|-
+
-
| Hijack of Ubiquitination by SARS-CoV-2 || SARS-CoV-2 includes a novel Orf10 that interacts with <br/>  multiple members of the Cullin 2 ubiquitin ligase complex. || [https://www.wikipathways.org/index.php/Pathway:WP4860 WP4860] || SARS-CoV-2 Pathways || style="font-style: italic; color: blue;" | Approved
+
-
|-
+
-
| Type I Interferon Induction and Signaling During SARS-CoV-2 Infection || The induction and signaling of type I interferon  <br/>  with specific SARS-CoV-2 protein and relevant drug. || [https://www.wikipathways.org/index.php/Pathway:WP4868 WP4868] || SARS-CoV-2 Pathways || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| COVID-19, thrombosis and anticoagulation || A commonly seen phenotype in patients suffering from Corona || [https://www.wikipathways.org/index.php/Pathway:WP4927 WP4927] || SARS-CoV-2 Pathways || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| Activation of NLRP3 Inflammasome by SARS-CoV-2 || Orf3a from SARS-CoV has been shown to bind TRAF3 and activate the NLRP3 inflammasome. || [https://www.wikipathways.org/index.php/Pathway:WP4876 WP4876] || SARS-CoV-2 Pathways || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| SARS-CoV-2 and Angiotensin-converting enzyme 2 (ACE2) receptor: <br/> Molecular mechanisms and potential therapeutic target || || [https://www.wikipathways.org/index.php/Pathway:WP4883 WP4883] || SARS-CoV-2 Pathways || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| COVID-19 AOP || Experimental pathway to investigate overlap of virus-host interaction and adverse outcome pathways || [https://www.wikipathways.org/index.php/Pathway:WP4891 WP4891] || SARS-CoV-2 Pathways || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| nsp9/nsp10-mediated SARS-CoV-2 pathogenesis || Virus-host interactome and proteomic survey of PMBCs from COVID-19 patients <br/> reveal potential virulence factors influencing SARS-CoV-2 pathogenesis || [https://www.wikipathways.org/index.php/Pathway:WP4884 WP4884] || SARS-CoV-2 Pathways || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| LDLRAD4 pathway in COVID-19 || || [https://www.wikipathways.org/index.php/Pathway:WP4904 WP4904] || SARS-CoV-2 Pathways || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| Overview of perturbations to host-cell autophagy,<br/> induced by distinct proteins of SARS-CoV-2 || || [https://www.wikipathways.org/index.php/Pathway:WP4936 WP4936] || SARS-CoV-2 Pathways || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| Coronavirus lipid metabolism || || [https://www.wikipathways.org/index.php/Pathway:WP4853 WP4853] || Other coronaviruses || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| Host-pathogen interaction of human corona viruses - autophagy || || [https://www.wikipathways.org/index.php/Pathway:WP4863 WP4863] || Other coronaviruses || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| Host-pathogen interaction of human corona viruses - apoptosis || || [https://www.wikipathways.org/index.php/Pathway:WP4864 WP4864] || Other coronaviruses || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| SARS coronavirus and innate immunity || || [https://www.wikipathways.org/index.php/Pathway:WP4912 WP4912] || Other coronaviruses || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| ER stress response in Coronavirus infection || || [https://www.wikipathways.org/index.php/Pathway:WP4861 WP4861] || Other coronaviruses || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| Downregulation of ACE2 expression by SARS-CoV <br/>infection and SARS-CoV Spike protein || || [https://www.wikipathways.org/index.php/Pathway:WP4799 WP4799] || Other coronaviruses || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| Host-pathogen interaction of human <br/> corona viruses - MAPK signaling || || [https://www.wikipathways.org/index.php/Pathway:WP4877 WP4877] || Other coronaviruses || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| Host-pathogen interaction of human <br/> corona viruses - Interferon induction || || [https://www.wikipathways.org/index.php/Pathway:WP4880 WP4880] || Other coronaviruses || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| ACE Inhibitor Pathway |||| [https://www.wikipathways.org/index.php/Pathway:WP554 WP554] || ACE2 || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
| Metabolism of Angiotensinogen to Angiotensins (Reactome) || || [https://www.wikipathways.org/index.php/Pathway:WP2729 WP2729] || ACE2 || style="font-style: italic; color: orange;" | In Progress
+
-
|-
+
-
|}
+
-
=== Pathway categories ===
+
Download all human [https://www.wikipathways.org//wpi/batchDownload.php?species=Homo%20sapiens&fileType=gpml&tag=Curation:COVID19 COVID19 pathways]
-
The pathways on this portal are grouped in the following categories: SARS-CoV-2 Pathways, Other coronaviruses (e.g. MERS, SARS-CoV) and virus-host specific interactions (e.g. ACE2).
+
=== Contact us ===
=== Contact us ===

Current revision

Pathway Collection

All pathways tagged with "Curation: COVID-19" will be linked to this overview table, to help keep track of the relevant pathways.

Download all human COVID19 pathways

Contact us

Send questions about WikiPathways to the wikipathways-discuss mailing list.

How to add a pathway to the portal

The list of Featured Pathways is not static and can be updated at any time. If you know of a pathway that should be added, please contact the administrator.

Personal tools