Help:WikiPathways Portals

From WikiPathways

(Difference between revisions)
Jump to: navigation, search
(added cptac)
Current revision (13:11, 13 April 2022) (view source)
 
(20 intermediate revisions not shown.)
Line 1: Line 1:
-
Portals within WikiPathways serve as organizing points for communities with focused pathway interests. For example, a portal could organize pathways for a particular species or research area. The main advantages of portals include:
+
{| class="wikitable sortable" style="float:right; margin-left: 100px;"
-
* Simplifying drawing and databasing of your pathways  
+
|-
 +
|<h2 class="frontPagePanel blueFg">Community Featured Pathways IEM</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:IEM | true}}
 +
|-
 +
|<h2 class="frontPagePanel blueFg">Community Featured Pathways COVID-19</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:COVID19 | true}}
 +
|}
 +
 
 +
Portals within WikiPathways serve as organizing points for communities with focused pathway interests.  
 +
For example, a portal could organize pathways for a particular species or research area.  
 +
 
 +
The main advantages of portals include:
 +
* Simplified drawing and collecting your pathways  
* Help to keep track of ‘works-in-progress’ with collaborators
* Help to keep track of ‘works-in-progress’ with collaborators
* Help attribute credit for pathway authors and curators
* Help attribute credit for pathway authors and curators
Line 6: Line 16:
* Help to define a community
* Help to define a community
-
<p>WikiPathways currently has nine portals, highlighting pathway content contributed by specific communities:
+
<br>Creating a portal is easy using existing templates available from WikiPathways.
 +
 
 +
If you are interested, please [https://docs.google.com/document/d/176BshTLE97V-gjzWrt0cgZEpQwnGUI86NdTaatETeSU/edit?pli=1#heading=h.b85xd25jlcie consult the portal maintenance guide] and [[Contact_Us|contact us]] for assistance.
-
* [[Portal:ExRNA|ExRNA]] portal with pathway content relevant to the extracellular RNA research community.
+
<br>WikiPathways has a growing list of portals:
-
* [[Portal:Disease|Disease]] portal with pathway content relevant to human disease and drug pathways.
+
-
* [[Portal:Reactome|Reactome]] content periodically synced with the Reactome collection
+
-
* [[Portal:Micronutrient|Micronutrient]] portal for the [http://www.nugo.org/micronutrient NuGO micronutrient project].
+
-
* [[Portal:CIRM|CIRM]] portal for the [http://www.cirm.ca.gov/ California Institute for Regenerative Medicine].
+
-
* [[Portal:CPTAC|CPTAC] portal for the [https://proteomics.cancer.gov/programs/cptac Clinical Proteomic Tumor Analysis Consortium].
+
-
* [[Portal:NetPath|NetPath]] portal for the [http://www.netpath.org/ NetPath] signal transduction pathways.
+
-
* [[Portal:WormBase|WormBase]] portal for the [http://www.wormbase.org/#01-23-6 WormBase] community
+
-
* [[Portal:Plants|Plants]] portal for the plant research community, a collaboration with the [http://jaiswallab.cgrb.oregonstate.edu/ Jaiswal Lab] and [http://www.gramene.org/ Gramene].
+
-
* [[Portal:Nanomaterials|Nanomaterials]] portal for nano systems biology research.
+
-
<br>Creating a portal is easy using existing templates available from WikiPathways. If you are interested in creating a portal at WikiPathways, please [[Contact_Us|contact us!]].
+
* [[Portal:AOP|Adverse Outcome Pathway]]
-
</p>
+
* [[Portal:IEM|Inherited Metabolic Disorders (IMDs), or Inborn Errors of Metabolism (IEM)]]
 +
* [[Portal:CIRM|California Institute for Regenerative Medicine, CIRM]]
 +
* [[Portal:Disease/COVIDPathways|COVID-19]]
 +
* [[Portal:CPTAC|Clinical Proteomic Tumor Analysis Consortium, CPTAC]]
 +
* [[Portal:Disease|Disease]]     
 +
* [[Portal:ExRNA|ExRNA]]
 +
* [[Portal:Lipids|Lipids]]
 +
* [[Portal:Micronutrient|Micronutrients]]
 +
* [[Portal:Nanomaterials|Nanomaterials]]
 +
* [[Portal:NetPath|NetPath]]
 +
* [[Portal:Plants|Plant Pathways]]
 +
* [[Portal:RareDisease|Rare Disease]]
 +
* [[Portal:RenalGenomics|Renal Genomics]]
 +
* [[Portal:Reactome|Reactome]]
 +
* [[Portal:SkeletalDysplasia|Skeletal Dysplasia]]
 +
* [[Portal:WormBase|WormBase]]
-
<p>[[:Help:Contents|Return to Help Contents]]</p>
+
[[Category:Portals]]
-
<p>[[:Help:Databases|Continue to WikiPathways Databases]]</p>
+

Current revision

Community Featured Pathways IEM

Vitamin B12 disorders (Homo sapiens)

Image does not exist
Vitamin B12 disorders

Community Featured Pathways COVID-19

SARS coronavirus and innate immunity (Homo sapiens)

Image does not exist
SARS coronavirus and innate immunity

Portals within WikiPathways serve as organizing points for communities with focused pathway interests. For example, a portal could organize pathways for a particular species or research area.

The main advantages of portals include:

  • Simplified drawing and collecting your pathways
  • Help to keep track of ‘works-in-progress’ with collaborators
  • Help attribute credit for pathway authors and curators
  • Attract new collaborators
  • Help to define a community


Creating a portal is easy using existing templates available from WikiPathways.

If you are interested, please consult the portal maintenance guide and contact us for assistance.


WikiPathways has a growing list of portals:

Retrieved from "https://classic.wikipathways.org/index.php/Help:WikiPathways_Portals"
Personal tools