Date TBD 2015
From WikiPathways
(Difference between revisions)
(→Participants) |
Current revision (21:05, 24 February 2015) (view source) m (Jan XX 2015 moved to Date TBD 2015) |
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* Fixing annotations | * Fixing annotations | ||
| + | ** fill-in missing protein/metabolite identifiers | ||
* Improving layouts | * Improving layouts | ||
| - | * Adding Ontology tags (Pathway onotology, Disesase Ontology etc.. as Reactome already has Gene Ontology information).. | + | ** layout of nodes (for better human readability) |
| + | ** layout/path of edges | ||
| + | * Adding literature references | ||
| + | * Adding Ontology tags (Pathway onotology, Disesase Ontology etc.. as Reactome already has Gene Ontology information) | ||
| + | * Updating a targeted set of potentially outdated pathways, i.e., with new biological information | ||
| + | * Updating a targeted set of pathways that are incomplete | ||
== Notes == | == Notes == | ||
| - | ... | + | Input from Egon : [https://docs.google.com/spreadsheets/d/1hFmLctdsAPMztFwgfpfzFuzLYS7qzRnpl4icjx4G1OI/edit#gid=0 Google document] containing nodes with ChEBI identifiers not marked as "metabolite". |
| + | |||
| + | Figure out what the problem is ? | ||
== Participants == | == Participants == | ||
| Line 26: | Line 34: | ||
* Alex | * Alex | ||
* Chris Evelo | * Chris Evelo | ||
| + | * Susan | ||
* Egon Willighagen | * Egon Willighagen | ||
* Nuno | * Nuno | ||
Current revision
Join us for a curation jamboree!
We are organizing our next curation event to improve the quality and extent of our pathways. Curation events are open to all registered WikiPathways users, no prior experience necessary!
Suggested tasks
Work on the Reactome Pathways Collection
- Fixing annotations
- fill-in missing protein/metabolite identifiers
- Improving layouts
- layout of nodes (for better human readability)
- layout/path of edges
- Adding literature references
- Adding Ontology tags (Pathway onotology, Disesase Ontology etc.. as Reactome already has Gene Ontology information)
- Updating a targeted set of potentially outdated pathways, i.e., with new biological information
- Updating a targeted set of pathways that are incomplete
Notes
Input from Egon : Google document containing nodes with ChEBI identifiers not marked as "metabolite".
Figure out what the problem is ?
Participants
- Anwesha
- Tina
- Alex
- Chris Evelo
- Susan
- Egon Willighagen
- Nuno
- Jonathan MELIUS
- Kristina
- Peter D'E
- Lisa Matthews
- Bijay Jassal (Reactome)
- Anders
