MediaWiki:Curationtags-definition.xml

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(reverting as test)
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<Tag
<Tag
-
name="Curation:Tutorial"
+
  name="Curation:ProposedDeletion"
-
displayName="Test pathway"
+
  displayName="Proposed deletion"
-
description="Use this tag to mark the pathway you create while doing the [[Help:Tutorial|tutorial]]. A tutorial pathway will not be included in the download archives and all tutorial pathways will be periodically deleted."
+
  description="Use this tag to notify the author that this pathway is proposed for deletion. Please explain why the pathway should be deleted in the tag text."
 +
  newEditHighlight="2 weeks"
 +
  highlightAction="delete"
 +
  icon="Deletion.png"
   bureaucrat="1"
   bureaucrat="1"
-
icon="Tutorial.png"
 
/>
/>
<Tag
<Tag
-
  name="Curation:UnderConstruction"
+
  name="Curation:NeedsReference"
-
  displayName="Under construction"
+
  displayName="Literature reference needed"
-
newEditHighlight="yes"
+
  description="Use this tag when the pathway requires a literature reference."
-
highlightAction="underConstruction"
+
-
  description="Use this tag to notify other users that this pathway is still under construction."
+
  bureaucrat="1"
  bureaucrat="1"
-
  icon="UnderConstruction.png"
+
  icon="NeedsRef.png"
/>
/>
 +
 +
<Tag
 +
name="Curation:MissingXRef"
 +
displayName="Missing gene/protein database references"
 +
description="Use this tag when one or more genes/proteins/metabolites are missing a database reference."
 +
bureaucrat="1"
 +
icon="MissingXref.png"
 +
/>
 +
 +
<Tag
 +
name="Curation:NoInteractions"
 +
displayName="Unconnected lines"
 +
description="Use this tag when one or more lines that represent an interaction are not properly linked."
 +
bureaucrat="1"
 +
icon="Unconnected.png"
 +
/>
 +
<Tag
<Tag
  name="Curation:AnalysisCollection"
  name="Curation:AnalysisCollection"
-
  displayName="Approved version"
+
  displayName="Curated collection"
  dropDown="Curated pathways"
  dropDown="Curated pathways"
  description="Use this tag to include the pathway in the curated collection"
  description="Use this tag to include the pathway in the curated collection"
Line 61: Line 78:
<Tag
<Tag
-
  name="Curation:MissingDescription"
+
  name="Curation:Hypothetical"
-
  displayName="Add description"
+
  displayName="Hypothetical pathway"
-
  description="Use this tag to mark pathways with a missing or incomplete description field"
+
  description="Use this tag to note a hypothetical pathway."
-
bureaucrat="1"
+
  icon="Hypothetical.png"
-
  icon="MissingDescription.png"
+
/>
/>
 +
<Tag
<Tag
-
  name="Curation:NeedsReference"
+
  name="Curation:Tutorial"
-
  displayName="Add references"
+
  displayName="Tutorial pathway"
-
  description="Use this tag when the pathway requires a literature reference."
+
  description="Use this tag to mark the pathway you create while doing the [[Help:Tutorial|tutorial]]. A tutorial pathway will not be included in the download archives and all tutorial pathways will be periodically deleted."
 +
  bureaucrat="1"
 +
icon="Tutorial.png"
 +
/>
 +
 
 +
<Tag
 +
name="Curation:InappropriateContent"
 +
displayName="Inappropriate content"
 +
description="Use this tag to mark inappropriate content. Please specify in the tag text which part of the pathway is inappropriate."
  bureaucrat="1"
  bureaucrat="1"
-
icon="NeedsRef.png"
 
/>
/>
<Tag
<Tag
-
  name="Curation:MissingXRef"
+
  name="Curation:UnderConstruction"
-
  displayName="Annotate nodes"
+
  displayName="Under construction"
-
  description="Use this tag when one or more genes/proteins/metabolites are missing a database reference."
+
newEditHighlight="yes"
 +
highlightAction="underConstruction"
 +
  description="Use this tag to notify other users that this pathway is still under construction."
  bureaucrat="1"
  bureaucrat="1"
-
  icon="MissingXref.png"
+
  icon="UnderConstruction.png"
/>
/>
<Tag
<Tag
-
  name="Curation:NoInteractions"
+
  name="Curation:MissingDescription"
-
  displayName="Fix interactions"
+
  displayName="Missing description"
-
  description="Use this tag when one or more lines that represent an interaction are not properly linked."
+
  description="Use this tag to mark pathways with a missing or incomplete description field"
  bureaucrat="1"
  bureaucrat="1"
-
  icon="Unconnected.png"
+
  icon="MissingDescription.png"
/>
/>
 +
<Tag
 +
  name="Curation:Stub"
 +
  displayName="Stub"
 +
  description="This is a Pathway for an interesting / useful topic, but it's incomplete, needs to be improved, and more details need to be filled out."
 +
  bureaucrat="1"
 +
  icon="Stub.png"
 +
/>
<Tag  
<Tag  
Line 101: Line 134:
   icon="NeedsWork.png"
   icon="NeedsWork.png"
/>
/>
-
 
-
<Tag
 
-
  name="Curation:Stub"
 
-
  displayName="Incomplete"
 
-
  description="This is a Pathway for an interesting / useful topic, but it's incomplete, needs to be improved, and more details need to be filled out."
 
-
  bureaucrat="1"
 
-
  icon="Stub.png"
 
-
/>
 
-
 
<Tag  
<Tag  
   name="Curation:NonTypicalPathway"
   name="Curation:NonTypicalPathway"
-
   displayName="Annotated lists"
+
   displayName="Non-typical pathway"
   description="Use this tag to notify the community that the contents do not represent a typical pathway. Please explain what the pathway represents in the tag text."
   description="Use this tag to notify the community that the contents do not represent a typical pathway. Please explain what the pathway represents in the tag text."
   icon="NonTypical.png"
   icon="NonTypical.png"
/>
/>
-
 
<Tag
<Tag
-
  name="Curation:Hypothetical"
+
  name="Curation:CIRM_Related"
-
  displayName="Hypothetical"
+
  displayName="CIRM Related"
-
  description="Use this tag to note a hypothetical pathway."
+
  description="Use this tag to mark pathways that are related to the research topics of CIRM grantees. CIRM is the California Institute for Regenerative Medicine and maintains a WikiPathways portal highlighting CIRM-related pathways."
-
icon="Hypothetical.png"
+
  shortName="CIRM"
-
/>
+
-
 
+
-
 
+
-
<Tag
+
-
name="Curation:InappropriateContent"
+
-
displayName="Inappropriate"
+
-
description="Use this tag to mark inappropriate content. Please specify in the tag text which part of the pathway is inappropriate."
+
-
  bureaucrat="1"
+
/>
/>
Line 140: Line 155:
  useRevision="true"
  useRevision="true"
  shortName="Wikipedia"
  shortName="Wikipedia"
-
/>
 
-
 
-
<Tag
 
-
name="Curation:OpenAccess"
 
-
displayName="Open access publication"
 
-
description="Use this tag to identify pathways based on figures published in Open Access journals."
 
-
shortName="OpenAccess"
 
-
/>
 
-
 
-
<Tag
 
-
name="Curation:CIRM_Related"
 
-
displayName="CIRM related"
 
-
description="Use this tag to mark pathways that are related to the research topics of CIRM grantees. CIRM is the California Institute for Regenerative Medicine and maintains a WikiPathways portal highlighting CIRM-related pathways."
 
-
shortName="CIRM"
 
/>
/>
<Tag
<Tag
  name="Curation:Reactome_Approved"
  name="Curation:Reactome_Approved"
-
  displayName="Reactome approved"
+
  displayName="Reactome Approved"
  useRevision="true"
  useRevision="true"
  description="Revisions with this tag are included in the curated Reactome archive. Reactome is a peer-reviewed pathway database and utilizes WikiPathways as part of its community curation and distribution effort."
  description="Revisions with this tag are included in the curated Reactome archive. Reactome is a peer-reviewed pathway database and utilizes WikiPathways as part of its community curation and distribution effort."
Line 165: Line 166:
<Tag
<Tag
-
  name="Curation:SGD_Approved"
+
  name="Curation:OpenAccess"
-
  displayName="SGD approved"
+
  displayName="Open Access Publication"
-
useRevision="true"
+
  description="Use this tag to identify pathways based on figures published in Open Access journals."
-
  description="Pathways with this tag will be included in the SGD pathway archive. This tag applies to the revision you are viewing when adding or editing the tag."
+
  shortName="OpenAccess"
-
  shortName="SGD"
+
/>
/>
<Tag
<Tag
  name="Curation:WormBase_Approved"
  name="Curation:WormBase_Approved"
-
  displayName="WormBase approved"
+
  displayName="WormBase Approved"
  useRevision="true"
  useRevision="true"
  description="Pathways with this tag will be included in the WormBase pathway archive. This tag applies to the revision you are viewing when adding or editing the tag."
  description="Pathways with this tag will be included in the WormBase pathway archive. This tag applies to the revision you are viewing when adding or editing the tag."
  shortName="WormBase"
  shortName="WormBase"
/>
/>
-
 
<Tag
<Tag
-
  name="Curation:ProposedDeletion"
+
name="Curation:SGD_Approved"
-
  displayName="Request deletion"
+
displayName="SGD Approved"
-
  description="Use this tag to notify the author that this pathway is proposed for deletion. Please explain why the pathway should be deleted in the tag text."
+
useRevision="true"
-
  newEditHighlight="2 weeks"
+
description="Pathways with this tag will be included in the SGD pathway archive. This tag applies to the revision you are viewing when adding or editing the tag."
-
  highlightAction="delete"
+
shortName="SGD"
-
  icon="Deletion.png"
+
-
  bureaucrat="1"
+
/>
/>
</TagDefinitions>
</TagDefinitions>

Revision as of 23:41, 21 January 2017

<?xml version="1.0"?> <TagDefinitions>

<Tag

 name="Curation:ProposedDeletion"
 displayName="Proposed deletion"
 description="Use this tag to notify the author that this pathway is proposed for deletion. Please explain why the pathway should be deleted in the tag text."
 newEditHighlight="2 weeks"
 highlightAction="delete"
 icon="Deletion.png"
 bureaucrat="1"

/>

<Tag

name="Curation:NeedsReference"
displayName="Literature reference needed"
description="Use this tag when the pathway requires a literature reference."
bureaucrat="1"
icon="NeedsRef.png"

/>

<Tag

name="Curation:MissingXRef"
displayName="Missing gene/protein database references"
description="Use this tag when one or more genes/proteins/metabolites are missing a database reference."
bureaucrat="1"
icon="MissingXref.png"

/>

<Tag

name="Curation:NoInteractions"
displayName="Unconnected lines"
description="Use this tag when one or more lines that represent an interaction are not properly linked."
bureaucrat="1"
icon="Unconnected.png"

/>

<Tag

name="Curation:AnalysisCollection"
displayName="Curated collection"
dropDown="Curated pathways"
description="Use this tag to include the pathway in the curated collection"
useRevision="true"
shortName="Curated"
topTag="1"
icon="Curated.png"

/>

<Tag

name="Curation:FeaturedPathway"
displayName="Featured pathway"
dropDown="Featured pathways"
description="Use this tag to include the pathway in the featured pathways collection"
useRevision="true"
shortName="Featured"
topTag="1"
default="1"
icon="Featured.png"

/>

<Tag

name="Curation:Hypothetical"
displayName="Hypothetical pathway"
description="Use this tag to note a hypothetical pathway."
icon="Hypothetical.png"

/>


<Tag

name="Curation:Tutorial"
displayName="Tutorial pathway"
description="Use this tag to mark the pathway you create while doing the tutorial. A tutorial pathway will not be included in the download archives and all tutorial pathways will be periodically deleted."
 bureaucrat="1"
icon="Tutorial.png"

/>

<Tag

name="Curation:InappropriateContent"
displayName="Inappropriate content"
description="Use this tag to mark inappropriate content. Please specify in the tag text which part of the pathway is inappropriate."
bureaucrat="1"

/>

<Tag

name="Curation:UnderConstruction"
displayName="Under construction"
newEditHighlight="yes"
highlightAction="underConstruction"
description="Use this tag to notify other users that this pathway is still under construction."
bureaucrat="1"
icon="UnderConstruction.png"

/>

<Tag

name="Curation:MissingDescription"
displayName="Missing description"
description="Use this tag to mark pathways with a missing or incomplete description field"
bureaucrat="1"
icon="MissingDescription.png"

/>

<Tag

 name="Curation:Stub"
 displayName="Stub"
 description="This is a Pathway for an interesting / useful topic, but it's incomplete, needs to be improved, and more details need to be filled out."
 bureaucrat="1"
 icon="Stub.png"

/>

<Tag

 name="Curation:NeedsWork"
 displayName="Needs work"
 dropDown="Pathways in progress"
 description="Use this tag to mark pathways in need of curation. Try to suggest specific steps that would improve the content."
 topTag="1"
 icon="NeedsWork.png"

/>

<Tag

 name="Curation:NonTypicalPathway"
 displayName="Non-typical pathway"
 description="Use this tag to notify the community that the contents do not represent a typical pathway. Please explain what the pathway represents in the tag text."
 icon="NonTypical.png"

/>

<Tag

name="Curation:CIRM_Related"
displayName="CIRM Related"
description="Use this tag to mark pathways that are related to the research topics of CIRM grantees. CIRM is the California Institute for Regenerative Medicine and maintains a WikiPathways portal highlighting CIRM-related pathways."
shortName="CIRM"

/>

<Tag

name="Curation:Wikipedia"
displayName="Featured in Wikipedia"
description="Use this tag to indicate pathways that have been integrated into Wikipedia articles as interactive maps"
useRevision="true"
shortName="Wikipedia"

/>

<Tag

name="Curation:Reactome_Approved"
displayName="Reactome Approved"
useRevision="true"
description="Revisions with this tag are included in the curated Reactome archive. Reactome is a peer-reviewed pathway database and utilizes WikiPathways as part of its community curation and distribution effort."
shortName="Reactome"

/>

<Tag

name="Curation:OpenAccess"
displayName="Open Access Publication"
description="Use this tag to identify pathways based on figures published in Open Access journals."
shortName="OpenAccess"

/>

<Tag

name="Curation:WormBase_Approved"
displayName="WormBase Approved"
useRevision="true"
description="Pathways with this tag will be included in the WormBase pathway archive. This tag applies to the revision you are viewing when adding or editing the tag."
shortName="WormBase"

/>

<Tag

name="Curation:SGD_Approved"
displayName="SGD Approved"
useRevision="true"
description="Pathways with this tag will be included in the SGD pathway archive. This tag applies to the revision you are viewing when adding or editing the tag."
shortName="SGD"

/>

</TagDefinitions>

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