Portal:Blau/PathwayAnalysis
From WikiPathways
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For example scripts (in R), please visit [https://bigcat-um.github.io/PathwayAnalysisBlauBook/ PathwayAnalysisBlauBook]. | For example scripts (in R), please visit [https://bigcat-um.github.io/PathwayAnalysisBlauBook/ PathwayAnalysisBlauBook]. | ||
| - | The Figure on the left shows an example of network analysis, where known drug-target interactions from DrugBank have been added to the purine metabolism pathway. | + | The Figure on the left shows an example of network analysis with [https://cytoscape.org/ Cytoscape], where known drug-target interactions from [https://www.drugbank.ca/ DrugBank] using the [https://cytargetlinker.github.io/ CyTargetLinker app] have been added to the purine metabolism pathway. |
Revision as of 13:14, 24 August 2020
With the pathways from the Blau book (as well as with other pathways on WikiPathways), various data analysis approaches can be performed.
For example scripts (in R), please visit PathwayAnalysisBlauBook.
The Figure on the left shows an example of network analysis with Cytoscape, where known drug-target interactions from DrugBank using the CyTargetLinker app have been added to the purine metabolism pathway.
