GPCRs, class C metabotropic glutamate, pheromone (Rattus norvegicus)

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Orphan GPRC5Metabotropic glutamateMetabotropic glutamate otherGABA-BGrm1Gabbr1Grm8Gprc5aGrm2CasrGrm6Grm5Gabbr2Gprc5bGrm4GRM3Gprc5dGrm7Gprc5c


Description

No description

Comments

GenMAPP notes 
This MAPP was created using the GPCRDB (Horn et al., 1998), http://www.cmbi.kun.nl/7tm/. The groupings are based on the GPCR phylogenetic tree available from the GPCRDB and the training sets used by Karchin et al. (Bioinformatics, 2002, pg. 147-159). The labels indicate children and grandchildren of the various classes of GPCRs as described by these references.
HomologyConvert 
This pathway was inferred from Homo sapiens pathway WP501(r21732) with a 93% conversion rate.

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Quality Tags

Ontology Terms

 

Bibliography

  1. Karchin R, Karplus K, Haussler D; ''Classifying G-protein coupled receptors with support vector machines''; Bioinformatics, 2002 PubMed Europe PMC Scholia
  2. Horn F, Weare J, Beukers MW, Hörsch S, Bairoch A, Chen W, Edvardsen O, Campagne F, Vriend G.; ''GPCRDB: an information system for G protein-coupled receptors''; Nucleic Acids Research, 1998 PubMed Europe PMC Scholia

History

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CompareRevisionActionTimeUserComment
128013view15:53, 21 January 2024EweitzUpgrade literature notes in description to formal references
128012view14:06, 21 January 2024EweitzAggregations seem to be simple groupings, not quarternary molecular complexes
128011view14:04, 21 January 2024EweitzIncrease font size (8 -> 12), for readability
128010view14:01, 21 January 2024EweitzTranpose graphics from vertical to horizontal, for readability in typical viewports
116974view10:42, 16 May 2021EweitzModified title
69379view18:56, 8 July 2013MaintBotUpdated to 2013 gpml schema
67322view10:37, 26 June 2013Christine ChichesterOntology Term : 'G protein mediated signaling pathway' added !
41694view02:36, 2 March 2011MaintBotRemoved redundant pathway information and comments
34079view19:12, 9 December 2009MaintBotAutomatic update of empty xrefs
32089view13:42, 14 August 2009MaintBotFixed group labels
30994view00:57, 30 July 2009MaintBotConverted from Homo sapiens
20765view11:29, 14 November 2008MaintBot[[Pathway:Rattus norvegicus:GPCRDB Class C Metabotropic glutamate pheromone]] moved to [[Pathway:WP42]]: Moved to stable identifier
8118view13:46, 7 January 2008MaintBot[[Pathway:Rat:GPCRDB Class C Metabotropic glutamate pheromone]] moved to [[Pathway:Rattus norvegicus:GPCRDB Class C Metabotropic glutamate pheromone]]: Renaming species
7680view16:09, 18 December 2007MaintBotfixed category names
7424view12:42, 4 November 2007MaintBotAdded categories to GPML
6547view22:20, 22 May 2007169.230.77.174gpml file for [[Rat:GPCRDB_Class_C_Metabotropic_glutamate_pheromone]]

External references

DataNodes

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NameTypeDatabase referenceComment
CasrGeneProduct24247 (Entrez Gene)
GRM3GeneProduct24416 (Entrez Gene)
Gabbr1GeneProduct81657 (Entrez Gene)
Gabbr2GeneProduct83633 (Entrez Gene)
Gprc5aGeneProduct312790 (Entrez Gene)
Gprc5bGeneProduct293546 (Entrez Gene)
Gprc5cGeneProduct287805 (Entrez Gene)
Gprc5dGeneProduct500349 (Entrez Gene)
Grm1GeneProduct24414 (Entrez Gene)
Grm2GeneProduct24415 (Entrez Gene)
Grm4GeneProduct24417 (Entrez Gene)
Grm5GeneProduct24418 (Entrez Gene)
Grm6GeneProduct24419 (Entrez Gene)
Grm7GeneProduct81672 (Entrez Gene)
Grm8GeneProduct60590 (Entrez Gene)

Annotated Interactions

No annotated interactions
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