Eukaryotic translation elongation (Homo sapiens)

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321Aminoacyl-tRNA[cytosol]80S ribosome[cytosol]eEF2:GDP [cytosol]80S:aminoacyltRNA:mRNA:eEF1A:GTP[cytosol]80S ribosome[cytosol]80S:Met-tRNAi:mRNA[cytosol]40S ribosomalcomplex [cytosol]60S ribosomalcomplex [cytosol]60S ribosomalcomplex [cytosol]Elongation complexwith growing peptidechain [cytosol]80S ribosome[cytosol]60S ribosomalcomplex [cytosol]40S ribosomalcomplex [cytosol]80S:Met-tRNAi:mRNA[cytosol]eEF1A:GTP:aminoacyl-tRNAcomplex [cytosol]Aminoacyl-tRNA[cytosol]eEF1A:GTP [cytosol]80S:Met-tRNAi:mRNA[cytosol]40S ribosomalcomplex [cytosol]40S ribosomalcomplex [cytosol]Aminoacyl-tRNA[cytosol]80SRibosome:mRNA:peptidyl-tRNAwith elongatingpeptide [cytosol]40S ribosomalcomplex [cytosol]eEF1A:GTP [cytosol]80S ribosome[cytosol]eEF1B complex[cytosol]eEF1A:GTP [cytosol]eEF2:GTP [cytosol]60S ribosomalcomplex [cytosol]cytosol60S ribosomalcomplex [cytosol]eEF1B:GDP exchangecomplex [cytosol]80S ribosome[cytosol]eEF1A:GTP:aminoacyl-tRNAcomplex [cytosol]80S ribosome[cytosol]eEF1A:GDP [cytosol]80S:Met-tRNAi:mRNA:aminoacyl-tRNA[cytosol]eEF1B complex[cytosol]40S ribosomalcomplex [cytosol]60S ribosomalcomplex [cytosol]RPSA [cytosol]RPL36 [cytosol]RPS19 [cytosol]EEF2 [cytosol]His-tRNA(His)[cytosol]Tyr-tRNA(Tyr)[cytosol]RPL9 [cytosol]RPL9 [cytosol]eEF1B:GDP exchangecomplexHis-tRNA(His)[cytosol]RPS24 [cytosol]eEF2:GDPRPL34 [cytosol]RPL8 [cytosol]RPSA [cytosol]RPL24 [cytosol]EEF1A1 [cytosol]Ser-tRNA(Ser)[cytosol]EEF1B2 [cytosol]RPL7A [cytosol]RPS29 [cytosol]RPS21 [cytosol]RPL3 [cytosol]RPL28 [cytosol]RPL36 [cytosol]RPLP2 [cytosol]RPL12 [cytosol]Ile-tRNA(Ile)[cytosol]RPS4X [cytosol]RPL18A [cytosol]RPS27A(77-156)[cytosol]RPS19 [cytosol]5S rRNA [cytosol]Tyr-tRNA(Tyr)[cytosol]Ala-tRNA(Ala)[cytosol]RPS25 [cytosol]RPS15 [cytosol]Arg-tRNA(Arg)[cytosol]RPL13(2-211)[cytosol]RPL23 [cytosol]Pro-tRNA(Pro)[cytosol]RPL22 [cytosol]RPL26L1(2-145)[cytosol]RPL37A [cytosol]RPL34 [cytosol]RPL15(2-204)[cytosol]RPL22 [cytosol]RPL30(2-115)[cytosol]RPL19 [cytosol]FAU [cytosol]RPL36A [cytosol]RPLP0 [cytosol]RPL21 [cytosol]RPS23 [cytosol]RPL34 [cytosol]RPS5(1-204)[cytosol]Asp-tRNA(Asp)[cytosol]RPL13A [cytosol]EEF1B2 [cytosol]RPS6 [cytosol]RPL35 [cytosol]RPL37 [cytosol]RPS10 [cytosol]RPL26L1(2-145)[cytosol]RPL21 [cytosol]RPS12 [cytosol]RPS4Y1(2-263)[cytosol]RPL13A [cytosol]RPS2(2-293)[cytosol]RPL31 [cytosol]RPL26L1(2-145)[cytosol]RPL32 [cytosol]RPS16 [cytosol]RPS23 [cytosol]RPSA [cytosol]GTPRPL7A [cytosol]RPL27A [cytosol]RPL4 [cytosol]RPS7 [cytosol]RPS15A [cytosol]RPS14 [cytosol]RPS4Y1(2-263)[cytosol]RPL35 [cytosol]RPL28 [cytosol]EEF1A1 [cytosol]RPL26 [cytosol]RPS6 [cytosol]RPS7 [cytosol]RPL38 [cytosol]RPS10 [cytosol]EEF1A1 [cytosol]UBA52(77-128)[cytosol]RPL4 [cytosol]RPL23A [cytosol]RPS27 [cytosol]RPL26 [cytosol]Trp-tRNA(Trp)[cytosol]RPS27A(77-156)[cytosol]RPL35A [cytosol]RPS13(2-151)[cytosol]RPS9 [cytosol]Ala-tRNA(Ala)[cytosol]RPL7 [cytosol]RPLP0 [cytosol]RPL27(2-136)[cytosol]RPL14 [cytosol]RPL5 [cytosol]RPL26 [cytosol]28S rRNA [cytosol]RPL27(2-136)[cytosol]RPS12 [cytosol]RPL35A [cytosol]RPL18 [cytosol]RPL36A [cytosol]UBA52(77-128)[cytosol]FAU [cytosol]RPL37 [cytosol]Ile-tRNA(Ile)[cytosol]RPL35A [cytosol]Asn-tRNA(Asn)[cytosol]RPL13(2-211)[cytosol]RPS12 [cytosol]RPL37A [cytosol]RPLP0 [cytosol]RPS15 [cytosol]RPS20 [cytosol]RPL31 [cytosol]RPS29 [cytosol]RPL37 [cytosol]RPS26 [cytosol]RPS27 [cytosol]RPS9 [cytosol]RPL10A [cytosol]RPL18A [cytosol]RPS21 [cytosol]Thr-tRNA(Thr)[cytosol]RPS10 [cytosol]RPL31 [cytosol]RPS4Y1(2-263)[cytosol]GDP [cytosol]RPLP2 [cytosol]RPS12 [cytosol]RPL3L(2-407)[cytosol]RPS19 [cytosol]RPL37A [cytosol]RPS18 [cytosol]RPLP1(2-114)[cytosol]RPL17 [cytosol]RPL29 [cytosol]Leu-tRNA(Leu)[cytosol]RPS16 [cytosol]GTP [cytosol]RPL18A [cytosol]RPL30(2-115)[cytosol]RPS11 [cytosol]Ala-tRNA(Ala)[cytosol]RPL18A [cytosol]RPS4X [cytosol]RPS27A(77-156)[cytosol]RPL38 [cytosol]RPS15A [cytosol]RPL14 [cytosol]RPS7 [cytosol]RPLP0 [cytosol]RPL27A [cytosol]RPS26 [cytosol]RPL30(2-115)[cytosol]Lys-tRNA(Lys)[cytosol]EEF2RPS15 [cytosol]RPS4X [cytosol]RPS5(1-204)[cytosol]RPS3A [cytosol]RPL22 [cytosol]RPL35A [cytosol]RPS27A(77-156)[cytosol]5.8S rRNA [cytosol]RPL32 [cytosol]Ile-tRNA(Ile)[cytosol]RPL36 [cytosol]RPL15(2-204)[cytosol]RPS6 [cytosol]His-tRNA(His)[cytosol]RPS14 [cytosol]RPL15(2-204)[cytosol]RPL11 [cytosol]RPS15A [cytosol]RPL11 [cytosol]RPL13A [cytosol]eEF1A:GTP:aminoacyl-tRNAcomplexRPL4 [cytosol]RPL13A [cytosol]RPL10A [cytosol]EEF1G [cytosol]RPL10A [cytosol]RPS5(1-204)[cytosol]Arg-tRNA(Arg)[cytosol]RPS15A [cytosol]Val-tRNA(Val)[cytosol]GTP [cytosol]RPL5 [cytosol]RPL12 [cytosol]RPL23A [cytosol]RPS9 [cytosol]RPL8 [cytosol]RPL31 [cytosol]RPS28 [cytosol]RPLP0 [cytosol]RPS24 [cytosol]RPL13(2-211)[cytosol]5.8S rRNA [cytosol]Gly-tRNA(Gly)[cytosol]RPL24 [cytosol]80S:aminoacyltRNA:mRNA:eEF1A:GTPRPL37 [cytosol]RPL27(2-136)[cytosol]RPL10A [cytosol]RPL29 [cytosol]RPL38 [cytosol]EEF1A1RPL21 [cytosol]RPS28 [cytosol]18S rRNA [cytosol]RPS21 [cytosol]RPL37A [cytosol]RPL24 [cytosol]RPL41 [cytosol]RPL35 [cytosol]RPL13(2-211)[cytosol]RPS4Y1(2-263)[cytosol]RPL19 [cytosol]Gln-tRNA(Gln)[cytosol]RPS3 [cytosol]RPL11 [cytosol]RPS21 [cytosol]RPL32 [cytosol]RPS16 [cytosol]RPL29 [cytosol]EEF1A1 [cytosol]RPL14 [cytosol]RPL41 [cytosol]RPS16 [cytosol]UBA52(77-128)[cytosol]RPS3A [cytosol]RPL32 [cytosol]FAU [cytosol]RPS18 [cytosol]RPS15 [cytosol]Lys-tRNA(Lys)[cytosol]Asn-tRNA(Asn)[cytosol]RPL35 [cytosol]RPL36 [cytosol]RPL27A [cytosol]RPS26 [cytosol]RPL34 [cytosol]RPL36 [cytosol]RPL9 [cytosol]Phe-tRNA(Phe)[cytosol]Gly-tRNA(Gly)[cytosol]RPS3A [cytosol]RPS9 [cytosol]RPL15(2-204)[cytosol]Val-tRNA(Val)[cytosol]RPS24 [cytosol]RPS23 [cytosol]RPS16 [cytosol]Met-tRNA(Met)[cytosol]RPL18 [cytosol]Thr-tRNA(Thr)[cytosol]RPS10 [cytosol]RPL9 [cytosol]EEF1B2RPL30(2-115)[cytosol]RPS17 [cytosol]RPL37A [cytosol]RPL34 [cytosol]RPL23 [cytosol]RPS14 [cytosol]80S:Met-tRNAi:mRNA:aminoacyl-tRNARPL4 [cytosol]RPS26 [cytosol]RPL37 [cytosol]RPS3A [cytosol]5S rRNA [cytosol]RPL7A [cytosol]RPL39 [cytosol]RPS12 [cytosol]RPS24 [cytosol]5.8S rRNA [cytosol]Cys-tRNA(Cys)[cytosol]RPS23 [cytosol]RPS8(2-208)[cytosol]RPS4X [cytosol]80SRibosome:mRNA:peptidyl-tRNAwith elongatingpeptideFAU [cytosol]RPL17 [cytosol]RPLP1(2-114)[cytosol]Glu-tRNA(Glu)[cytosol]RPL24 [cytosol]RPS25 [cytosol]Cys-tRNA(Cys)[cytosol]RPS4Y1(2-263)[cytosol]RPL10 [cytosol]RPL28 [cytosol]RPS26 [cytosol]RPS17 [cytosol]RPS15A [cytosol]RPL30(2-115)[cytosol]RPL35A [cytosol]RPL32 [cytosol]EEF1D [cytosol]PiRPL18A [cytosol]RPL19 [cytosol]eEF2:GTPRPL37 [cytosol]28S rRNA [cytosol]RPL18 [cytosol]RPL35A [cytosol]Gln-tRNA(Gln)[cytosol]RPS17 [cytosol]RPS18 [cytosol]RPS6 [cytosol]RPL3L(2-407)[cytosol]RPL3 [cytosol]RPL36A [cytosol]RPS7 [cytosol]RPS17 [cytosol]RPS4X [cytosol]RPS14 [cytosol]RPS11 [cytosol]RPL18 [cytosol]RPL26L1(2-145)[cytosol]FAU [cytosol]RPLP2 [cytosol]RPL27A [cytosol]GTPRPL8 [cytosol]RPL18 [cytosol]RPL27(2-136)[cytosol]RPS16 [cytosol]RPS6 [cytosol]RPS27 [cytosol]RPS7 [cytosol]RPL36A [cytosol]RPL11 [cytosol]RPS13(2-151)[cytosol]RPL26 [cytosol]RPL29 [cytosol]RPL23 [cytosol]Phe-tRNA(Phe)[cytosol]RPL8 [cytosol]RPL41 [cytosol]RPS29 [cytosol]RPS8(2-208)[cytosol]Gln-tRNA(Gln)[cytosol]RPS19 [cytosol]RPL5 [cytosol]Phe-tRNA(Phe)[cytosol]RPL14 [cytosol]GTP [cytosol]RPL10A [cytosol]RPS2(2-293)[cytosol]RPS15 [cytosol]GDP [cytosol]RPL26L1(2-145)[cytosol]Leu-tRNA(Leu)[cytosol]RPL3L(2-407)[cytosol]RPLP2 [cytosol]RPS23 [cytosol]RPL10 [cytosol]RPL17 [cytosol]Asp-tRNA(Asp)[cytosol]RPS28 [cytosol]RPS27A(77-156)[cytosol]RPL22 [cytosol]RPS5(1-204)[cytosol]RPL39 [cytosol]RPL29 [cytosol]RPL6 [cytosol]Tyr-tRNA(Tyr)[cytosol]RPS19 [cytosol]RPS20 [cytosol]RPL3L(2-407)[cytosol]RPL35 [cytosol]RPS13(2-151)[cytosol]Ser-tRNA(Ser)[cytosol]28S rRNA [cytosol]RPL31 [cytosol]RPL11 [cytosol]RPL15(2-204)[cytosol]RPL14 [cytosol]RPL41 [cytosol]RPL13A [cytosol]RPS27 [cytosol]RPL14 [cytosol]RPL30(2-115)[cytosol]RPS29 [cytosol]RPS20 [cytosol]RPL38 [cytosol]RPL7 [cytosol]RPL41 [cytosol]Asp-tRNA(Asp)[cytosol]RPL29 [cytosol]RPL36A [cytosol]RPS27 [cytosol]RPS2(2-293)[cytosol]RPL10 [cytosol]RPLP1(2-114)[cytosol]18S rRNA [cytosol]RPS18 [cytosol]RPL7A [cytosol]RPSA [cytosol]RPL22 [cytosol]Gly-tRNA(Gly)[cytosol]RPS13(2-151)[cytosol]RPS14 [cytosol]EEF1GRPSA [cytosol]RPL28 [cytosol]RPS28 [cytosol]Pro-tRNA(Pro)[cytosol]RPS15A [cytosol]RPLP2 [cytosol]GDP [cytosol]RPS11 [cytosol]Pro-tRNA(Pro)[cytosol]RPS11 [cytosol]18S rRNA [cytosol]EEF2 [cytosol]RPL19 [cytosol]18S rRNA [cytosol]RPS25 [cytosol]RPLP1(2-114)[cytosol]5S rRNA [cytosol]RPS3 [cytosol]RPL9 [cytosol]28S rRNA [cytosol]RPL27(2-136)[cytosol]RPL7 [cytosol]RPL4 [cytosol]RPS27 [cytosol]RPL36 [cytosol]RPL18 [cytosol]RPL39 [cytosol]RPL21 [cytosol]RPS20 [cytosol]RPS8(2-208)[cytosol]18S rRNA [cytosol]18S rRNA [cytosol]RPS5(1-204)[cytosol]RPL22 [cytosol]RPL6 [cytosol]RPL12 [cytosol]5.8S rRNA [cytosol]RPS11 [cytosol]RPLP1(2-114)[cytosol]28S rRNA [cytosol]RPS12 [cytosol]RPL18A [cytosol]RPL10 [cytosol]RPS20 [cytosol]RPS2(2-293)[cytosol]RPL7 [cytosol]RPL27A [cytosol]eEF1A:GTPVal-tRNA(Val)[cytosol]RPL13(2-211)[cytosol]RPS3A [cytosol]RPS3 [cytosol]RPL7A [cytosol]RPS9 [cytosol]RPL3 [cytosol]RPS2(2-293)[cytosol]RPS18 [cytosol]RPS27A(77-156)[cytosol]Arg-tRNA(Arg)[cytosol]RPL26L1(2-145)[cytosol]RPL11 [cytosol]80S ribosomeRPLP1(2-114)[cytosol]RPS24 [cytosol]RPL6 [cytosol]RPL4 [cytosol]RPL19 [cytosol]RPS4X [cytosol]PiRPS3 [cytosol]Met-tRNA(Met)[cytosol]RPS4Y1(2-263)[cytosol]RPL27A [cytosol]RPL26 [cytosol]RPS17 [cytosol]RPL6 [cytosol]RPS15 [cytosol]RPS20 [cytosol]RPL24 [cytosol]5.8S rRNA [cytosol]RPS6 [cytosol]RPS24 [cytosol]RPL3 [cytosol]UBA52(77-128)[cytosol]RPL23 [cytosol]RPL10 [cytosol]RPS3A [cytosol]RPL12 [cytosol]RPS21 [cytosol]RPL12 [cytosol]RPLP0 [cytosol]Met-tRNA(Met)[cytosol]RPS29 [cytosol]RPL8 [cytosol]GTP [cytosol]RPS23 [cytosol]80S:Met-tRNAi:mRNA5S rRNA [cytosol]RPL39 [cytosol]RPL26 [cytosol]RPSA [cytosol]RPL41 [cytosol]RPL7 [cytosol]RPS18 [cytosol]EEF1DLeu-tRNA(Leu)[cytosol]5.8S rRNA [cytosol]RPS28 [cytosol]Glu-tRNA(Glu)[cytosol]RPL27(2-136)[cytosol]RPS11 [cytosol]Aminoacyl-tRNARPL6 [cytosol]RPL3 [cytosol]RPL28 [cytosol]Asn-tRNA(Asn)[cytosol]RPS14 [cytosol]RPL37A [cytosol]RPL3L(2-407)[cytosol]RPS8(2-208)[cytosol]RPL3 [cytosol]RPS19 [cytosol]Lys-tRNA(Lys)[cytosol]RPLP2 [cytosol]RPL7 [cytosol]RPS3 [cytosol]RPS29 [cytosol]RPL12 [cytosol]RPL13(2-211)[cytosol]RPL23A [cytosol]eEF1A:GDPRPS13(2-151)[cytosol]RPL28 [cytosol]28S rRNA [cytosol]UBA52(77-128)[cytosol]Trp-tRNA(Trp)[cytosol]RPL3L(2-407)[cytosol]RPL31 [cytosol]RPL9 [cytosol]RPS2(2-293)[cytosol]RPL38 [cytosol]RPL35 [cytosol]RPS17 [cytosol]RPL21 [cytosol]RPL23 [cytosol]5S rRNA [cytosol]RPS28 [cytosol]Elongation complexwith growing peptidechainRPS21 [cytosol]RPL38 [cytosol]RPS25 [cytosol]Cys-tRNA(Cys)[cytosol]RPL5 [cytosol]RPL39 [cytosol]RPS10 [cytosol]RPL17 [cytosol]RPS7 [cytosol]RPL13A [cytosol]RPL7A [cytosol]RPL34 [cytosol]EEF1D [cytosol]RPL23A [cytosol]Glu-tRNA(Glu)[cytosol]RPL24 [cytosol]Ser-tRNA(Ser)[cytosol]RPS25 [cytosol]RPL8 [cytosol]RPL23 [cytosol]RPL39 [cytosol]RPL10 [cytosol]RPL19 [cytosol]5S rRNA [cytosol]eEF1B complexRPL36A [cytosol]RPL17 [cytosol]RPL6 [cytosol]RPS5(1-204)[cytosol]RPL23A [cytosol]Trp-tRNA(Trp)[cytosol]RPL23A [cytosol]RPS9 [cytosol]Thr-tRNA(Thr)[cytosol]RPS10 [cytosol]RPL21 [cytosol]RPS13(2-151)[cytosol]RPL10A [cytosol]RPS3 [cytosol]RPL15(2-204)[cytosol]RPS8(2-208)[cytosol]RPL32 [cytosol]UBA52(77-128)[cytosol]RPS26 [cytosol]RPS8(2-208)[cytosol]RPL5 [cytosol]RPS25 [cytosol]RPL5 [cytosol]RPL17 [cytosol]EEF1G [cytosol]FAU [cytosol]


Description

The translation elongation cycle adds one amino acid at a time to a growing polypeptide according to the sequence of codons found in the mRNA. The next available codon on the mRNA is exposed in the aminoacyl-tRNA (aa-tRNA) binding site (A site) on the 30S subunit.
A: Ternary complexes of aa -tRNA:eEF1A:GTP enter the ribosome and enable the anticodon of the tRNA to make a codon/anticodon interaction with the A-site codon of the mRNA. B: Upon cognate recognition, the eEF1A:GTP is brought into the GTPase activating center of the ribosome, GTP is hydrolyzed and eEF1A:GDP leaves the ribosome. C: The peptidyl transferase center of ribosome catalyses the formation of a peptide bond between the incoming amino acid and the peptide found in the peptidyl-tRNA binding site (P site). D: In the pre-translocation state of the ribosome, the eEF2:GTP enters the ribosome, physically translocating the peptidyl-tRNA out of the A site to P site and leaves the ribosome eEF2:GDP. This action of eEF2:GTP accounts for the precise movement of the mRNA by 3 nucleotides.Consequently, deacylated tRNA is shifted to the E site. A ribosome associated ATPase activity is proposed to stimulate the release of deacylated tRNA from the E site subsequent to translocation (Elskaya et al., 1991). In this post-translocation state, the ribosome is now ready to receive a new ternary complex.
This process is illustrated below with: an amino acyl-tRNA with an amino acid, a peptidyl-tRNA with a growing peptide, a deacylated tRNA with an -OH, and a ribosome with A,P and E sites to accommodate these three forms of tRNA.Original Pathway at Reactome: http://www.reactome.org/PathwayBrowser/#DB=gk_current&FOCUS_SPECIES_ID=48887&FOCUS_PATHWAY_ID=156842

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Bibliography

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  1. Carvalho MD, Carvalho JF, Merrick WC.; ''Biological characterization of various forms of elongation factor 1 from rabbit reticulocytes.''; PubMed Europe PMC Scholia
  2. Pérez JM, Siegal G, Kriek J, Hård K, Dijk J, Canters GW, Möller W.; ''The solution structure of the guanine nucleotide exchange domain of human elongation factor 1beta reveals a striking resemblance to that of EF-Ts from Escherichia coli.''; PubMed Europe PMC Scholia
  3. Van Ness BG, Howard JB, Bodley JW.; ''ADP-ribosylation of elongation factor 2 by diphtheria toxin. Isolation and properties of the novel ribosyl-amino acid and its hydrolysis products.''; PubMed Europe PMC Scholia
  4. Veremieva M, Khoruzhenko A, Zaicev S, Negrutskii B, El'skaya A.; ''Unbalanced expression of the translation complex eEF1 subunits in human cardioesophageal carcinoma.''; PubMed Europe PMC Scholia
  5. Guillot D, Penin F, Di Pietro A, Sontag B, Lavergne JP, Reboud JP.; ''GTP binding to elongation factor eEF-2 unmasks a tryptophan residue required for biological activity.''; PubMed Europe PMC Scholia
  6. Van Ness BG, Howard JB, Bodley JW.; ''ADP-ribosylation of elongation factor 2 by diphtheria toxin. NMR spectra and proposed structures of ribosyl-diphthamide and its hydrolysis products.''; PubMed Europe PMC Scholia
  7. Kapp LD, Lorsch JR.; ''The molecular mechanics of eukaryotic translation.''; PubMed Europe PMC Scholia

History

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CompareRevisionActionTimeUserComment
117719view12:33, 22 May 2021EweitzModified title
114891view16:40, 25 January 2021ReactomeTeamReactome version 75
113337view11:41, 2 November 2020ReactomeTeamReactome version 74
112548view15:51, 9 October 2020ReactomeTeamReactome version 73
101462view11:32, 1 November 2018ReactomeTeamreactome version 66
101000view21:12, 31 October 2018ReactomeTeamreactome version 65
100536view19:46, 31 October 2018ReactomeTeamreactome version 64
100083view16:30, 31 October 2018ReactomeTeamreactome version 63
99634view15:02, 31 October 2018ReactomeTeamreactome version 62 (2nd attempt)
99240view12:44, 31 October 2018ReactomeTeamreactome version 62
93857view13:41, 16 August 2017ReactomeTeamreactome version 61
93420view11:23, 9 August 2017ReactomeTeamreactome version 61
86508view09:19, 11 July 2016ReactomeTeamreactome version 56
83399view11:07, 18 November 2015ReactomeTeamVersion54
81592view13:08, 21 August 2015ReactomeTeamVersion53
77053view08:35, 17 July 2014ReactomeTeamFixed remaining interactions
76758view12:11, 16 July 2014ReactomeTeamFixed remaining interactions
76083view10:14, 11 June 2014ReactomeTeamRe-fixing comment source
75793view11:32, 10 June 2014ReactomeTeamReactome 48 Update
75143view14:09, 8 May 2014AnweshaFixing comment source for displaying WikiPathways description
74790view08:52, 30 April 2014ReactomeTeamReactome46
69032view17:50, 8 July 2013MaintBotUpdated to 2013 gpml schema
45249view18:35, 7 October 2011AlexanderPicoOntology Term : 'translation elongation pathway' added !
42034view21:51, 4 March 2011MaintBotAutomatic update
39837view05:52, 21 January 2011MaintBotNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
18S rRNA [cytosol]ProteinX03205 (EMBL)
28S rRNA [cytosol]ProteinM11167 (EMBL)
5.8S rRNA [cytosol]ProteinJ01866 (EMBL)
5S rRNA [cytosol]ProteinV00589 (EMBL)
80S

Ribosome:mRNA:peptidyl-tRNA with elongating

peptide
ComplexREACT_4835 (Reactome)
80S ribosomeComplexREACT_4330 (Reactome)
80S:Met-tRNAi:mRNA:aminoacyl-tRNAComplexREACT_3365 (Reactome)
80S:Met-tRNAi:mRNAComplexREACT_4537 (Reactome)
80S:aminoacyl tRNA:mRNA:eEF1A:GTPComplexREACT_5558 (Reactome)
Ala-tRNA(Ala) [cytosol]MetaboliteCHEBI:17732 (ChEBI)
Aminoacyl-tRNAMetaboliteREACT_4792 (Reactome)
Arg-tRNA(Arg) [cytosol]MetaboliteCHEBI:18366 (ChEBI)
Asn-tRNA(Asn) [cytosol]MetaboliteCHEBI:29265 (ChEBI)
Asp-tRNA(Asp) [cytosol]MetaboliteCHEBI:29158 (ChEBI)
Cys-tRNA(Cys) [cytosol]MetaboliteCHEBI:29152 (ChEBI)
EEF1A1 [cytosol]ProteinP68104 (Uniprot-TrEMBL)
EEF1A1ProteinP68104 (Uniprot-TrEMBL)
EEF1B2 [cytosol]ProteinP24534 (Uniprot-TrEMBL)
EEF1B2ProteinP24534 (Uniprot-TrEMBL)
EEF1D [cytosol]ProteinP29692 (Uniprot-TrEMBL)
EEF1DProteinP29692 (Uniprot-TrEMBL)
EEF1G [cytosol]ProteinP26641 (Uniprot-TrEMBL)
EEF1GProteinP26641 (Uniprot-TrEMBL)
EEF2 [cytosol]ProteinP13639 (Uniprot-TrEMBL)
EEF2ProteinP13639 (Uniprot-TrEMBL)
Elongation complex

with growing peptide

chain
ComplexREACT_5024 (Reactome)
FAU [cytosol]ProteinP62861 (Uniprot-TrEMBL)
GDP [cytosol]MetaboliteCHEBI:17552 (ChEBI)
GTP [cytosol]MetaboliteCHEBI:15996 (ChEBI)
GTPMetaboliteCHEBI:15996 (ChEBI)
Gln-tRNA(Gln) [cytosol]MetaboliteCHEBI:29166 (ChEBI)
Glu-tRNA(Glu) [cytosol]MetaboliteCHEBI:29157 (ChEBI)
Gly-tRNA(Gly) [cytosol]MetaboliteCHEBI:29156 (ChEBI)
His-tRNA(His) [cytosol]MetaboliteCHEBI:29155 (ChEBI)
Ile-tRNA(Ile) [cytosol]MetaboliteCHEBI:29160 (ChEBI)
Leu-tRNA(Leu) [cytosol]MetaboliteCHEBI:16624 (ChEBI)
Lys-tRNA(Lys) [cytosol]MetaboliteCHEBI:16047 (ChEBI)
Met-tRNA(Met) [cytosol]MetaboliteCHEBI:16635 (ChEBI)
Phe-tRNA(Phe) [cytosol]MetaboliteCHEBI:29153 (ChEBI)
PiMetaboliteCHEBI:18367 (ChEBI)
Pro-tRNA(Pro) [cytosol]MetaboliteCHEBI:29154 (ChEBI)
RPL10 [cytosol]ProteinP27635 (Uniprot-TrEMBL)
RPL10A [cytosol]ProteinP62906 (Uniprot-TrEMBL)
RPL11 [cytosol]ProteinP62913 (Uniprot-TrEMBL)
RPL12 [cytosol]ProteinP30050 (Uniprot-TrEMBL)
RPL13(2-211) [cytosol]ProteinP26373 (Uniprot-TrEMBL)
RPL13A [cytosol]ProteinP40429 (Uniprot-TrEMBL)
RPL14 [cytosol]ProteinP50914 (Uniprot-TrEMBL)
RPL15(2-204) [cytosol]ProteinP61313 (Uniprot-TrEMBL)
RPL17 [cytosol]ProteinP18621 (Uniprot-TrEMBL)
RPL18 [cytosol]ProteinQ07020 (Uniprot-TrEMBL)
RPL18A [cytosol]ProteinQ02543 (Uniprot-TrEMBL)
RPL19 [cytosol]ProteinP84098 (Uniprot-TrEMBL)
RPL21 [cytosol]ProteinP46778 (Uniprot-TrEMBL)
RPL22 [cytosol]ProteinP35268 (Uniprot-TrEMBL)
RPL23 [cytosol]ProteinP62829 (Uniprot-TrEMBL)
RPL23A [cytosol]ProteinP62750 (Uniprot-TrEMBL)
RPL24 [cytosol]ProteinP83731 (Uniprot-TrEMBL)
RPL26 [cytosol]ProteinP61254 (Uniprot-TrEMBL)
RPL26L1(2-145) [cytosol]ProteinQ9UNX3 (Uniprot-TrEMBL)
RPL27(2-136) [cytosol]ProteinP61353 (Uniprot-TrEMBL)
RPL27A [cytosol]ProteinP46776 (Uniprot-TrEMBL)
RPL28 [cytosol]ProteinP46779 (Uniprot-TrEMBL)
RPL29 [cytosol]ProteinP47914 (Uniprot-TrEMBL)
RPL3 [cytosol]ProteinP39023 (Uniprot-TrEMBL)
RPL30(2-115) [cytosol]ProteinP62888 (Uniprot-TrEMBL)
RPL31 [cytosol]ProteinP62899 (Uniprot-TrEMBL)
RPL32 [cytosol]ProteinP62910 (Uniprot-TrEMBL)
RPL34 [cytosol]ProteinP49207 (Uniprot-TrEMBL)
RPL35 [cytosol]ProteinP42766 (Uniprot-TrEMBL)
RPL35A [cytosol]ProteinP18077 (Uniprot-TrEMBL)
RPL36 [cytosol]ProteinQ9Y3U8 (Uniprot-TrEMBL)
RPL36A [cytosol]ProteinP83881 (Uniprot-TrEMBL)
RPL37 [cytosol]ProteinP61927 (Uniprot-TrEMBL)
RPL37A [cytosol]ProteinP61513 (Uniprot-TrEMBL)
RPL38 [cytosol]ProteinP63173 (Uniprot-TrEMBL)
RPL39 [cytosol]ProteinP62891 (Uniprot-TrEMBL)
RPL3L(2-407) [cytosol]ProteinQ92901 (Uniprot-TrEMBL)
RPL4 [cytosol]ProteinP36578 (Uniprot-TrEMBL)
RPL41 [cytosol]ProteinP62945 (Uniprot-TrEMBL)
RPL5 [cytosol]ProteinP46777 (Uniprot-TrEMBL)
RPL6 [cytosol]ProteinQ02878 (Uniprot-TrEMBL)
RPL7 [cytosol]ProteinP18124 (Uniprot-TrEMBL)
RPL7A [cytosol]ProteinP62424 (Uniprot-TrEMBL)
RPL8 [cytosol]ProteinP62917 (Uniprot-TrEMBL)
RPL9 [cytosol]ProteinP32969 (Uniprot-TrEMBL)
RPLP0 [cytosol]ProteinP05388 (Uniprot-TrEMBL)
RPLP1(2-114) [cytosol]ProteinP05386 (Uniprot-TrEMBL)
RPLP2 [cytosol]ProteinP05387 (Uniprot-TrEMBL)
RPS10 [cytosol]ProteinP46783 (Uniprot-TrEMBL)
RPS11 [cytosol]ProteinP62280 (Uniprot-TrEMBL)
RPS12 [cytosol]ProteinP25398 (Uniprot-TrEMBL)
RPS13(2-151) [cytosol]ProteinP62277 (Uniprot-TrEMBL)
RPS14 [cytosol]ProteinP62263 (Uniprot-TrEMBL)
RPS15 [cytosol]ProteinP62841 (Uniprot-TrEMBL)
RPS15A [cytosol]ProteinP62244 (Uniprot-TrEMBL)
RPS16 [cytosol]ProteinP62249 (Uniprot-TrEMBL)
RPS17 [cytosol]ProteinP08708 (Uniprot-TrEMBL)
RPS18 [cytosol]ProteinP62269 (Uniprot-TrEMBL)
RPS19 [cytosol]ProteinP39019 (Uniprot-TrEMBL)
RPS2(2-293) [cytosol]ProteinP15880 (Uniprot-TrEMBL)
RPS20 [cytosol]ProteinP60866 (Uniprot-TrEMBL)
RPS21 [cytosol]ProteinP63220 (Uniprot-TrEMBL)
RPS23 [cytosol]ProteinP62266 (Uniprot-TrEMBL)
RPS24 [cytosol]ProteinP62847 (Uniprot-TrEMBL)
RPS25 [cytosol]ProteinP62851 (Uniprot-TrEMBL)
RPS26 [cytosol]ProteinP62854 (Uniprot-TrEMBL)
RPS27 [cytosol]ProteinP42677 (Uniprot-TrEMBL)
RPS27A(77-156) [cytosol]ProteinP62979 (Uniprot-TrEMBL)
RPS28 [cytosol]ProteinP62857 (Uniprot-TrEMBL)
RPS29 [cytosol]ProteinP62273 (Uniprot-TrEMBL)
RPS3 [cytosol]ProteinP23396 (Uniprot-TrEMBL)
RPS3A [cytosol]ProteinP61247 (Uniprot-TrEMBL)
RPS4X [cytosol]ProteinP62701 (Uniprot-TrEMBL)
RPS4Y1(2-263) [cytosol]ProteinP22090 (Uniprot-TrEMBL)
RPS5(1-204) [cytosol]ProteinP46782 (Uniprot-TrEMBL)
RPS6 [cytosol]ProteinP62753 (Uniprot-TrEMBL)
RPS7 [cytosol]ProteinP62081 (Uniprot-TrEMBL)
RPS8(2-208) [cytosol]ProteinP62241 (Uniprot-TrEMBL)
RPS9 [cytosol]ProteinP46781 (Uniprot-TrEMBL)
RPSA [cytosol]ProteinP08865 (Uniprot-TrEMBL)
Ser-tRNA(Ser) [cytosol]MetaboliteCHEBI:29162 (ChEBI)
Thr-tRNA(Thr) [cytosol]MetaboliteCHEBI:29163 (ChEBI)
Trp-tRNA(Trp) [cytosol]MetaboliteCHEBI:29159 (ChEBI)
Tyr-tRNA(Tyr) [cytosol]MetaboliteCHEBI:29161 (ChEBI)
UBA52(77-128) [cytosol]ProteinP62987 (Uniprot-TrEMBL)
Val-tRNA(Val) [cytosol]MetaboliteCHEBI:29164 (ChEBI)
eEF1A:GDPComplexREACT_5872 (Reactome)
eEF1A:GTP:aminoacyl-tRNA complexComplexREACT_3062 (Reactome)
eEF1A:GTPComplexREACT_3513 (Reactome)
eEF1B complexComplexREACT_3047 (Reactome)
eEF1B:GDP exchange complexComplexREACT_3385 (Reactome)
eEF2:GDPComplexREACT_5865 (Reactome)
eEF2:GTPComplexREACT_2807 (Reactome)

Annotated Interactions

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SourceTargetTypeDatabase referenceComment
80S

Ribosome:mRNA:peptidyl-tRNA with elongating

peptide
ArrowREACT_1937 (Reactome)
80S ribosomemim-catalysisREACT_1227 (Reactome)
80S ribosomemim-catalysisREACT_552 (Reactome)
80S:Met-tRNAi:mRNA:aminoacyl-tRNAArrowREACT_552 (Reactome)
80S:Met-tRNAi:mRNA:aminoacyl-tRNAREACT_1227 (Reactome)
80S:Met-tRNAi:mRNAREACT_2075 (Reactome)
80S:aminoacyl tRNA:mRNA:eEF1A:GTPArrowREACT_2075 (Reactome)
80S:aminoacyl tRNA:mRNA:eEF1A:GTPREACT_552 (Reactome)
Aminoacyl-tRNAREACT_1242 (Reactome)
EEF1A1REACT_90 (Reactome)
EEF1A1mim-catalysisREACT_90 (Reactome)
EEF1B2REACT_1395 (Reactome)
EEF1DREACT_1395 (Reactome)
EEF1GREACT_1395 (Reactome)
EEF2REACT_2173 (Reactome)
Elongation complex

with growing peptide

chain
ArrowREACT_1227 (Reactome)
Elongation complex

with growing peptide

chain
REACT_1937 (Reactome)
GTPREACT_2173 (Reactome)
GTPREACT_67 (Reactome)
GTPREACT_90 (Reactome)
PiArrowREACT_1937 (Reactome)
PiArrowREACT_552 (Reactome)
REACT_1227 (Reactome) The A- and P-sites of the ribosome positions the aa-tRNA and peptidyl-tRNA such that a nucleophilic attack can occur between the amine group of the A-site aa-tRNA and the carbonyl group of the growing peptide chain on the P-site tRNA, resulting in the formation of a peptide bond. The carboxyl end of the peptide chain is uncoupled from the tRNA molecule in the P-site and forms a new peptide bond with the amino acid that is in the A-site.
This process is illustrated below with: a peptidyl-tRNA with a growing peptide,a deacylated tRNA with an -OH and a ribosome with A,P and E sites to accommodate these three forms of tRNA.
REACT_1242 (Reactome) The binding of eEF1A:GTP to aminoacyl tRNA (aa-tRNA) results in the formation of a ternary complex (eEF1A:GTP:aa-tRNA). Human eEF1A and rabbit eEF1A are 100% identical, and prokaryotic homologue of eEF1A (EF-Tu) shows 59% identity in the GTP-binding domain.This process is illustrated below with: a GTP molecule in white and eEF1A protein in yellow.
REACT_1395 (Reactome) At the beginning of this reaction, 1 molecule of 'eEF1B alpha', 1 molecule of 'eEF1B gamma', and 1 molecule of 'eEF1B beta' are present. At the end of this reaction, 1 molecule of 'eEF1B complex' is present.

This reaction takes place in the 'cytosol'.

REACT_1937 (Reactome) Following peptide bond formation, GTP-bound eEF2 catalyzes the translocation of the deacylated tRNA in the P-site and the peptidyl-tRNA in the A-site (the pre-translocation state) into the E- and P- sites (the post-translocation state), respectively. Thus, the mRNA advances by three bases to expose the next codon in the A-site. After translocation, GDP-bound eEF2 leaves the ribosome to allow another round of elongation. eEF2 is reactivated by the release of GDP and binds GTP for subsequent rounds.
This process is illustrated below with a peptidyl-tRNA with a growing peptide, a deacylated tRNA with an -OH and a ribosome with A,P and E sites to accommodate these three forms of tRNA is also shown.
REACT_2075 (Reactome) Once the correct codon-anticodon match occurs between the mRNA and aa-tRNA, the decoding event triggers GTP hydrolysis on eEF1A. The resulting conformational change releases the aa-tRNA to the A-site, and GDP bound form eEF1A is released from the ribosome.
Insight into the mechanics of this system has been obtained from earlier works with rabbit reticulocytes and the E.coli system.
This process is illustrated below with: an amino acyl-tRNA with an amino acid, a peptidyl-tRNA with a growing peptide and a ribosome with A,P and E sites to accommodate these two forms of tRNA.
REACT_2173 (Reactome) At the beginning of this reaction, 1 molecule of 'eEF2', and 1 molecule of 'GTP' are present. At the end of this reaction, 1 molecule of 'eEF2:GTP' is present.

This reaction takes place in the 'cytosol'.

REACT_552 (Reactome) Once the correct codon-anticodon match occurs between the mRNA and aa-tRNA, the decoding event triggers GTP hydrolysis on eEF1A. The resulting conformational change releases the aa-tRNA to the A-site, and GDP bound form of eEF1A is released from the ribosome.
This process is illustrated below with: an amino acyl-tRNA with an amino acid,a peptidyl-tRNA with a growing peptide and a ribosome with A,P and E sites to accommodate these two forms of tRNA.
REACT_67 (Reactome) The eEF1B complex binds to eEF1A and regulates its activity by catalyzing the release of GDP. Subsequently, GTP is able to bind eEF1A allowing the formation of the ternary complex (eEF1A-GTP-aa-tRNA).In metazoans eEF1 protein family is composed of four subunits: eEF1A and eEF1B alpha, beta, and gamma (formerly EF-1alpha, EF-1beta, EF-1delta, and EF-1gamma, respectively). Both eEF1B alpha and eEF1B beta function as nucleotide exchange proteins. eEF1B gamma associates with eEF1B alpha and stimulates its exchange activity.
This process is illustrated below with a GTP molecule in white and eEF1A protein in yellow.The three subunits of eEF1B are also shown.
REACT_90 (Reactome) The cycle of elongation starts with an empty ribosomal A-site and the peptidyl-tRNA in the P-site. eEF1A is activated by GTP binding and allows for the subsequent binding of aminoacyl-tRNA (aa-tRNA).This process is illustrated below with a GTP molecule in white and eEF1A protein in yellow.
eEF1A:GDPArrowREACT_1937 (Reactome)
eEF1A:GDPArrowREACT_552 (Reactome)
eEF1A:GDPREACT_67 (Reactome)
eEF1A:GTP:aminoacyl-tRNA complexArrowREACT_1242 (Reactome)
eEF1A:GTP:aminoacyl-tRNA complexREACT_1937 (Reactome)
eEF1A:GTP:aminoacyl-tRNA complexREACT_2075 (Reactome)
eEF1A:GTPArrowREACT_67 (Reactome)
eEF1A:GTPArrowREACT_90 (Reactome)
eEF1A:GTPREACT_1242 (Reactome)
eEF1B complexArrowREACT_1395 (Reactome)
eEF1B complexREACT_67 (Reactome)
eEF1B complexmim-catalysisREACT_67 (Reactome)
eEF1B:GDP exchange complexArrowREACT_67 (Reactome)
eEF2:GDPArrowREACT_1937 (Reactome)
eEF2:GTPArrowREACT_2173 (Reactome)
eEF2:GTPREACT_1937 (Reactome)
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