DNA damage response (only ATM dependent) (Homo sapiens)

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141414141414141414141414Osxidative StressresistanceCytokine receptorUV radiation --> DNA damageFrizzled LigandsPMetabolitemitoch-ondriumDifferent PathwayCellRASPI3KBCRPhosphorylatedActivationExtra cellularspcaceCaption:Origin DNA damageresponseProliferationGene productChange in the Cell conditionMembraneInhibitionDNA damage sourceNucleusCellTCRTCF-1/LEFMetabolismExtra cellularspaceAPCRHOAPIK3C2GPIK3CAWNT2BRAC3TGFBNFKB1PIK3CGRAC1Cell CycleSOD2APCTP73TCF-1WNT5BWNT1TP53LDLRWNT7AWNT16CDKN1BMYCSCP2IRS1BADApoptosis WNT6WNT3ADVL2RBL2FOXO3FRAT1AKT3TCF-4Apoptosis AKT2AKT1MAPK10PDK1JUNBBC3Apoptosis AKT2GRB2SHC1PIK3C2ABAK1WNT2PIK3R4PPP2R5ECCND1PEPCKCTNNB1Apoptosis CCNG2PIK3CDNRASBCL2L11BCL6ATMWNT3DNA damage responseWNT7BKRASHMGB1PMAIP1BAXBIKWNT10BAKT3WNT11MLKLGSK3BINSRAXIN1CATPIK3R2PLAUCCND3FASLGDVL3RAC1MAPK9MAPK9CDKN2AHRASWNT10APIK3C2BBCL2CDC42ABL1MAP3K4MAPK2SOS2RAC2MDM2PIK3R1ERBB2TCF-3CCND2SMAD4c-MycAKT1SMAD3WNT4NFKB2FOSL1PPP2R5CPIK3C3CDKN1AG6PCTGFB1MAP3K7MAP3K1WNT16PIK3R5Cell CycleLEF1WNT5ABBC3SOS1PTENPIK3CBDVL1MAPK8BCL2L11PIK3R3


Description

This is the second pathway out of two pathways which deals with DNA damage response. It has two central gene products (ATM and TP53) which are connected with the first DNA damage response pathway.

In this pathway is only one source of DNA damage induction because most sources and their induction and involvement in the process in DNA damage are mentioned in the first DNA damage response pathway. If it is not mentioned different, the processes take place in the cell cytoplasm.

The goal of this second pathway is to mention more gene products and changes in the cell condition through the DNA damage response pathway and at the same time to keep it clearly arranged

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Ontology Terms

 

Bibliography

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  1. Harrison JC, Haber JE; ''Surviving the breakup: the DNA damage checkpoint.''; Annu Rev Genet, 2006 PubMed Europe PMC Scholia
  2. Pagano M, Jackson PK; ''Wagging the dogma; tissue-specific cell cycle control in the mouse embryo.''; Cell, 2004 PubMed Europe PMC Scholia
  3. Sherr CJ, Roberts JM; ''Living with or without cyclins and cyclin-dependent kinases.''; Genes Dev, 2004 PubMed Europe PMC Scholia
  4. Vousden KH, Lane DP; ''p53 in health and disease.''; Nat Rev Mol Cell Biol, 2007 PubMed Europe PMC Scholia
  5. Sengupta S, Harris CC; ''p53: traffic cop at the crossroads of DNA repair and recombination.''; Nat Rev Mol Cell Biol, 2005 PubMed Europe PMC Scholia
  6. Reshmi SC, Gollin SM; ''Chromosomal instability in oral cancer cells.''; J Dent Res, 2005 PubMed Europe PMC Scholia
  7. Zhou BB, Bartek J; ''Targeting the checkpoint kinases: chemosensitization versus chemoprotection.''; Nat Rev Cancer, 2004 PubMed Europe PMC Scholia
  8. Chargari C, Toillon RA, Macdermed D, Castadot P, Magnأ¯آ؟آ½أ¯آ؟آ½أژآ© N; ''Concurrent hormone and radiation therapy in patients with breast cancer: what is the rationale?''; Lancet Oncol, 2009 PubMed Europe PMC Scholia
  9. Strasser A; ''The role of BH3-only proteins in the immune system.''; Nat Rev Immunol, 2005 PubMed Europe PMC Scholia
  10. Cory S, Huang DC, Adams JM; ''The Bcl-2 family: roles in cell survival and oncogenesis.''; Oncogene, 2003 PubMed Europe PMC Scholia
  11. Lأ¯آ؟آ½أ¯آ؟آ½أژآ©brich M, Jeggo PA; ''The impact of a negligent G2/M checkpoint on genomic instability and cancer induction.''; Nat Rev Cancer, 2007 PubMed Europe PMC Scholia
  12. Ljungman M, Lane DP; ''Transcription - guarding the genome by sensing DNA damage.''; Nat Rev Cancer, 2004 PubMed Europe PMC Scholia
  13. Antoni L, Sodha N, Collins I, Garrett MD; ''CHK2 kinase: cancer susceptibility and cancer therapy - two sides of the same coin?''; Nat Rev Cancer, 2007 PubMed Europe PMC Scholia
  14. Sparmann A, van Lohuizen M; ''Polycomb silencers control cell fate, development and cancer.''; Nat Rev Cancer, 2006 PubMed Europe PMC Scholia
  15. Gil J, Peters G; ''Regulation of the INK4b-ARF-INK4a tumour suppressor locus: all for one or one for all.''; Nat Rev Mol Cell Biol, 2006 PubMed Europe PMC Scholia
  16. Fan HY, O'Connor A, Shitanaka M, Shimada M, Liu Z, Richards JS; ''Beta-catenin (CTNNB1) promotes preovulatory follicular development but represses LH-mediated ovulation and luteinization.''; Mol Endocrinol, 2010 PubMed Europe PMC Scholia
  17. Boutros R, Lobjois V, Ducommun B; ''CDC25 phosphatases in cancer cells: key players? Good targets?''; Nat Rev Cancer, 2007 PubMed Europe PMC Scholia
  18. Wang W; ''Emergence of a DNA-damage response network consisting of Fanconi anaemia and BRCA proteins.''; Nat Rev Genet, 2007 PubMed Europe PMC Scholia

History

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CompareRevisionActionTimeUserComment
134235view11:54, 17 July 2024EweitzMitigate graphical discrepancy between PathVisio and Kaavio / Pvjs
134234view11:52, 17 July 2024EweitzMitigate graphical discrepancy between PathVisio and Kaavio / Pvjs
134213view06:13, 17 July 2024EgonwReverted to version '10:57, 16 July 2024' by Egonw
134212view05:42, 17 July 2024EgonwReverted to version '15:02, 16 April 2023' by Egonw
134189view10:57, 16 July 2024EweitzMitigate graphical discrepancy between PathVisio and Kaavio / Pvjs
134188view10:56, 16 July 2024EweitzFix membrane bottom
134187view10:54, 16 July 2024EweitzEconomize layout
134186view10:50, 16 July 2024EweitzEconomize layout, standardize case
134185view10:42, 16 July 2024EweitzRefine legend
126217view15:02, 16 April 2023EgonwLicense is CCZero
116542view12:11, 7 May 2021EweitzModified title
113791view08:53, 24 November 2020Finterlymake pathways clickable and small graphical update
109435view10:17, 17 March 2020L DupuisConverted interaction to graphical line in legend
106372view00:55, 23 August 2019KhanspersModified description
105500view05:53, 8 August 2019KhanspersModified description
105238view20:32, 23 July 2019Khansperslayout changes and updated legend
104836view14:14, 20 June 2019Fehrhartinteraction between CTNNB1 and TCF complex
104835view14:12, 20 June 2019Fehrhart
104833view13:59, 20 June 2019Fehrhart
104309view21:41, 15 May 2019Khanspersupdated legend, clarified phosphorylation of CTNNB1, unified fonts, cleanup
104308view21:00, 15 May 2019KhanspersModified description
104307view20:59, 15 May 2019KhanspersModified description
95580view03:04, 3 January 2018Asios OliaModified description
94761view15:50, 5 October 2017Ryanmillerconnected lines
79974view08:10, 29 April 2015ZariChanged uniprot Id to Entrez gene for RAS, PI3K and TCF-1/LEF genes
70109view19:06, 12 July 2013MaintBotupdating to 2013 schema
69906view19:31, 11 July 2013AlexanderPicoModified title
67156view10:14, 26 June 2013Christine ChichesterOntology Term : 'p53-dependent G1/S DNA damage checkpoint pathway' added !
59215view20:07, 22 February 2013MaintBotUpdated Ensembl data source
46091view03:26, 15 December 2011AlexanderPicoconverted more hugo to hgnc
46084view02:18, 15 December 2011AllanKuchinskySpecify description
46083view02:17, 15 December 2011AllanKuchinskyupdated HGNC IDs
46082view02:12, 15 December 2011AllanKuchinskySpecify description
46081view19:32, 14 December 2011AlexanderPicoconverted a couple HUGOs to HGNC
45197view10:06, 7 October 2011MartijnVanIerselOntology Term : 'p53 signaling pathway' added !
41219view23:45, 1 March 2011MaintBotRemoved redundant pathway information and comments
38810view08:13, 24 September 2010Jildaucompartments
38809view08:10, 24 September 2010Jildautransparent
38808view08:01, 24 September 2010JildauReverted to version '13:13, 23 September 2010' by Jildau
38807view08:01, 24 September 2010JildauReverted to version '07:53, 24 September 2010' by Jildau
38806view07:56, 24 September 2010JildauReverted to version '13:13, 23 September 2010' by Jildau
38805view07:53, 24 September 2010Jildaucompartments
38658view13:13, 23 September 2010Mkutmonadded pathway links for "apoptosis", "dna damage response", "cell cycle"
33421view14:52, 30 November 2009MaintBotRemoved group label
30260view04:51, 25 July 2009AlexanderPicoModified categories
29695view07:30, 28 May 2009I379077Modified description
29688view13:25, 27 May 2009I379077Modified description
29679view13:05, 26 May 2009I379077Specify description
29678view12:53, 26 May 2009I379077Specify description
29677view12:49, 26 May 2009I379077Specify description

External references

DataNodes

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NameTypeDatabase referenceComment
ABL1GeneProductENSG00000097007 (Ensembl)
AKT1GeneProductAKT1 (HGNC)
AKT2GeneProductAKT2 (HGNC)
AKT3GeneProductAKT3 (HGNC)
APCGeneProduct324 (Entrez Gene)
APCGeneProductENSG00000134982 (Ensembl)
ATMGeneProductENSG00000149311 (Ensembl)
AXIN1GeneProduct8312 (Entrez Gene)
Apoptosis PathwayWP254 (WikiPathways)
BADGeneProductENSG00000002330 (Ensembl)
BAK1GeneProductENSG00000030110 (Ensembl)
BAXGeneProductENSG00000087088 (Ensembl)
BBC3GeneProductBBC3 (HGNC)
BCL2GeneProductENSG00000171791 (Ensembl)
BCL2L11GeneProductENSG00000153094 (Ensembl)
BCL6GeneProductENSG00000113916 (Ensembl)
BIKGeneProductENSG00000100290 (Ensembl)
CATGeneProductENSG00000121691 (Ensembl)
CCND1GeneProduct595 (Entrez Gene)
CCND2GeneProduct894 (Entrez Gene)
CCND3GeneProduct896 (Entrez Gene)
CCNG2GeneProductENSG00000138764 (Ensembl)
CDC42GeneProductENSG00000070831 (Ensembl)
CDKN1AGeneProductENSG00000124762 (Ensembl)
CDKN1BGeneProductENSG00000111276 (Ensembl)
CDKN2AGeneProductCDKN2A (HGNC)
CTNNB1GeneProduct1499 (Entrez Gene)
Cell CyclePathwayWP179 (WikiPathways)
DNA damage responsePathwayWP1530 (WikiPathways)
DVL1GeneProduct1855 (Entrez Gene)
DVL2GeneProduct1856 (Entrez Gene)
DVL3GeneProduct1857 (Entrez Gene)
ERBB2GeneProductENSG00000141736 (Ensembl)
FASLGGeneProductENSG00000117560 (Ensembl)
FOSL1GeneProduct8061 (Entrez Gene)
FOXO3GeneProductENSG00000118689 (Ensembl)
FRAT1GeneProduct10023 (Entrez Gene)
G6PCGeneProductENSG00000131482 (Ensembl)
GRB2GeneProductENSG00000177885 (Ensembl)
GSK3BGeneProduct2932 (Entrez Gene) MOUSE:KG38 MOUSE
HMGB1GeneProductENSG00000189403 (Ensembl)
HRASGeneProduct3265 (Entrez Gene)
INSRGeneProductENSG00000171105 (Ensembl)
IRS1GeneProductENSG00000169047 (Ensembl)
JUNGeneProduct3725 (Entrez Gene)
KRASGeneProduct3845 (Entrez Gene)
LDLRGeneProduct3949 (Entrez Gene)
LEF1GeneProduct51176 (Entrez Gene)
MAP3K1GeneProductENSG00000095015 (Ensembl)
MAP3K4GeneProductENSG00000085511 (Ensembl)
MAP3K7GeneProductENSG00000135341 (Ensembl)
MAPK10GeneProduct5602 (Entrez Gene)
MAPK2GeneProduct5594 (Entrez Gene)
MAPK8GeneProductENSG00000107643 (Ensembl)
MAPK9GeneProduct5601 (Entrez Gene)
MAPK9GeneProductENSG00000050748 (Ensembl)
MDM2GeneProductENSG00000135679 (Ensembl)
MLKLGeneProductENSG00000168404 (Ensembl)
MYCGeneProduct4609 (Entrez Gene)
NFKB1GeneProductNFKB1 (HGNC)
NFKB2GeneProductNFKB2 (HGNC)
NRASGeneProduct4893 (Entrez Gene)
PDK1GeneProductENSG00000152256 (Ensembl)
PEPCKGeneProduct5106 (Entrez Gene)
PIK3C2AGeneProduct5286 (Entrez Gene)
PIK3C2BGeneProduct5287 (Entrez Gene)
PIK3C2GGeneProduct5288 (Entrez Gene)
PIK3C3GeneProduct5289 (Entrez Gene)
PIK3CAGeneProduct5290 (Entrez Gene)
PIK3CBGeneProduct5291 (Entrez Gene)
PIK3CDGeneProduct5293 (Entrez Gene)
PIK3CGGeneProduct5294 (Entrez Gene)
PIK3R1GeneProduct5295 (Entrez Gene)
PIK3R2GeneProduct5296 (Entrez Gene)
PIK3R3GeneProduct8503 (Entrez Gene)
PIK3R4GeneProduct30849 (Entrez Gene)
PIK3R5GeneProduct23533 (Entrez Gene)
PLAUGeneProduct5328 (Entrez Gene)
PMAIP1GeneProductENSG00000141682 (Ensembl)
PPP2R5CGeneProduct5527 (Entrez Gene)
PPP2R5EGeneProduct5529 (Entrez Gene)
PTENGeneProductENSG00000171862 (Ensembl)
RAC1GeneProduct5879 (Entrez Gene)
RAC1GeneProductENSG00000136238 (Ensembl)
RAC2GeneProductENSG00000128340 (Ensembl)
RAC3GeneProductRAC3 (HGNC)
RBL2GeneProductENSG00000103479 (Ensembl)
RHOAGeneProduct387 (Entrez Gene)
SCP2GeneProductENSG00000116171 (Ensembl)
SHC1GeneProductENSG00000160691 (Ensembl)
SMAD3GeneProductENSG00000166949 (Ensembl)
SMAD4GeneProductENSG00000141646 (Ensembl)
SOD2GeneProductENSG00000112096 (Ensembl)
SOS1GeneProductENSG00000115904 (Ensembl)
SOS2GeneProductENSG00000100485 (Ensembl)
TCF-1GeneProduct6932 (Entrez Gene)
TCF-3GeneProduct83439 (Entrez Gene)
TCF-4GeneProduct6934 (Entrez Gene)
TGFB1GeneProductENSG00000105329 (Ensembl)
TGFBGeneProduct7040 (Entrez Gene)
TP53GeneProductENSG00000141510 (Ensembl)
TP73GeneProductENSG00000078900 (Ensembl)
WNT10AGeneProduct80326 (Entrez Gene)
WNT10BGeneProduct7480 (Entrez Gene)
WNT11GeneProduct7481 (Entrez Gene)
WNT16GeneProduct51384 (Entrez Gene)
WNT1GeneProduct7471 (Entrez Gene)
WNT2GeneProduct7472 (Entrez Gene)
WNT2BGeneProduct7482 (Entrez Gene)
WNT3GeneProduct7473 (Entrez Gene)
WNT3AGeneProduct89780 (Entrez Gene)
WNT4GeneProduct54361 (Entrez Gene)
WNT5AGeneProduct7474 (Entrez Gene)
WNT5BGeneProduct81029 (Entrez Gene)
WNT6GeneProduct7475 (Entrez Gene)
WNT7AGeneProduct7476 (Entrez Gene)
WNT7BGeneProduct7477 (Entrez Gene)
c-MycGeneProduct4609 (Entrez Gene)

Annotated Interactions

No annotated interactions

Retrieved from "https://classic.wikipathways.org/index.php/Pathway:WP710"
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