Krebs cycle disorders (Homo sapiens)

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ATPMETHYLMALONIC ACIDlactatesuccinatepyruvateFumaratepropionylSuccinyl coenzyme AmethylcitrateADPMethylmalonyl-CoAalpha-ketoglutaratecitrateAcetyl-CoAMETHYLMALONYL CARNITINE ESTER (C4DC)SUCCINYL CARNITINEESTER (C4DC)3-HYDROXYPROPIONATEPROPIONYLCARNITINE (C3)


Description

No description

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Quality Tags

Ontology Terms

 

Bibliography

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  1. Kyle S McCommis, Brian N Finck; ''Mitochondrial pyruvate transport: a historical perspective and future research directions ''; Biochem J., 2015 PubMed Europe PMC Scholia
  2. Kowluru A, Tannous M, Chen HQ; ''Localization and characterization of the mitochondrial isoform of the nucleoside diphosphate kinase in the pancreatic beta cell: evidence for its complexation with mitochondrial succinyl-CoA synthetase.''; Arch Biochem Biophys, 2002 PubMed Europe PMC Scholia
  3. Kavanaugh-Black A, Connolly DM, Chugani SA, Chakrabarty AM; ''Characterization of nucleoside-diphosphate kinase from Pseudomonas aeruginosa: complex formation with succinyl-CoA synthetase.''; Proc Natl Acad Sci U S A, 1994 PubMed Europe PMC Scholia
  4. Lawrence R Gray, Sean C Tompkins, Eric B Taylor; ''Disorders of the Pyruvate Metabolism and the Krebs Cycle''; Cell Mol Life Sci ., 2014 PubMed Europe PMC Scholia
  5. Kadrmas EF, Ray PD, Lambeth DO; ''Apparent ATP-linked succinate thiokinase activity and its relation to nucleoside diphosphate kinase in mitochondrial matrix preparations from rabbit.''; Biochim Biophys Acta, 1991 PubMed Europe PMC Scholia
  6. Nenad Blau, Marinus Duran, K Michael Gibson, Carlo Dionisi-Vici.; ''Physician's Guide to the Diagnosis, Treatment, and Follow-Up of Inherited Metabolic Diseases''; Springer-Verlag Berlin Heidelberg, 2014

History

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CompareRevisionActionTimeUserComment
128282view01:21, 30 January 2024EweitzFix legend layout
128281view01:18, 30 January 2024EweitzCopyedit nodes, standardize case
128280view01:08, 30 January 2024EweitzSoften disease color
123795view15:24, 12 August 2022DeSlAdded some more proteins, and cytosol vs mitochondrial matrix location
123794view15:18, 12 August 2022DeSlConvert arrow to translocation
123793view15:16, 12 August 2022DeSlAdded pyruvate transport
123792view15:11, 12 August 2022DeSlAdded reaction to Alanine
123791view15:05, 12 August 2022DeSlAdded LDH tetramers
123790view14:50, 12 August 2022DeSlAdded another lit. ref to full PW
123789view14:45, 12 August 2022DeSlAdding ID for Succinyl carnitine ester
120410view09:27, 30 November 2021Fehrhartboxed pathway node
119280view10:43, 23 June 2021FinterlyAdded ISBN for book citation
117701view12:21, 22 May 2021EweitzModified title
107304view14:36, 19 September 2019EgonwRemove an empty ChEBI identifier
107163view14:25, 17 September 2019MaintBotChEBI identifier normalization
106785view13:26, 17 September 2019MaintBotHMDB identifier normalization
104644view07:31, 7 June 2019JosienlandmanConverted the interaction lines to the diseases into graphical lines
104027view17:40, 25 April 2019IreneHemelModified description
102830view15:59, 24 January 2019DeSlModified description
102829view15:58, 24 January 2019DeSlAnnotated nodes.
102715view13:26, 21 January 2019DeSlModified description
98924view05:20, 16 October 2018EgonwModified description
98275view15:29, 15 August 2018DeSlModified description
98274view15:27, 15 August 2018DeSlModified description
98273view15:24, 15 August 2018DeSlOntology Term : 'mitochondrial encephalomyopathy' added !
98272view15:23, 15 August 2018DeSlChanged some MIM-conversion to arrows, since it's not sure if there is a one step conversion proccess involved.
98271view15:22, 15 August 2018DeSlAdded info on boxed metabolites.
98270view15:19, 15 August 2018DeSlAdded last unconnected line
98269view15:06, 15 August 2018DeSlAdded more info on SCS protein complex
98268view14:54, 15 August 2018DeSlAdded specific subunits of SCS complex
98267view14:17, 15 August 2018DeSlOntology Term : 'methylmalonic acidemia' added !
98266view14:15, 15 August 2018DeSlOntology Term : 'fumaric aciduria pathway' added !
98265view14:15, 15 August 2018DeSlOntology Term : 'citric acid cycle pathway' added !
98264view14:14, 15 August 2018DeSlModified description
98263view14:13, 15 August 2018DeSlAdded diseases as text boxes (with OMIM linkouts), changed layout, added some enzymes+metabolites to close the cycle.
96740view05:58, 2 April 2018EgonwReplaced secondary ChEBI identifiers with primary identifiers.
96739view05:57, 2 April 2018EgonwRemoved a wrong identifier
96576view13:54, 21 March 2018Richard97New pathway

External references

DataNodes

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NameTypeDatabase referenceComment
3-HYDROXYPROPIONATEMetabolitea.k.a. 2-methylcitric acid
ADPMetaboliteCHEBI:16761 (ChEBI)
ATPMetaboliteCHEBI:15422 (ChEBI)
Acetyl-CoAMetabolite
FumarateMetaboliteCHEBI:18012 (ChEBI)
METHYLMALONIC ACIDMetaboliteCHEBI:30860 (ChEBI)
METHYLMALONYL CARNITINE ESTER (C4DC)Metabolite
Methylmalonyl-CoAMetaboliteHMDB01269 (HMDB)
PROPIONYLCARNITINE (C3)Metabolitea.k.a. 2-methylcitric acid
SUCCINYL CARNITINE ESTER (C4DC)Metabolite
Succinyl coenzyme AMetaboliteCHEBI:15380 (ChEBI)
alpha-ketoglutarateMetaboliteCHEBI:16810 (ChEBI)
citrateMetaboliteCHEBI:133748 (ChEBI)
lactateMetaboliteCHEBI:24996 (ChEBI)
methylcitrateMetaboliteQ27104155 (Wikidata) a.k.a. 2-methylcitric acid
propionylMetaboliteCHEBI:26294 (ChEBI)
pyruvateMetaboliteCHEBI:15361 (ChEBI)
succinateMetaboliteCHEBI:30031 (ChEBI)

Annotated Interactions

No annotated interactions

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