ROS and RNS production in phagocytes (Homo sapiens)

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15, 2524, 27209, 17, 23, 285, 6, 221, 13319122, 7, 182, 148, 11221bacterialhost cellhost cell cytosolbacterialphagocytic vesicle lumencytosolcell wallDivalent metalstransported byNRAMP1O2.-ATP6V1H ATP6V0B ATP6V1C2 ATP6V1E2 Fe2+ NOPeptide-Methionine(S)-SulfoxideFeHMGSHFAD TCIRG1 ATP6V1A NADP+hydroperoxylZn2+ NOS1 H+Mn2+ NOATP6V1E1 ATP6V0D2 Fe2+NOO2Mn2+ NCF4 PeroxynitriteO2.-Divalent metalstransported byNRAMP1H+NADPHV-ATPaseATP6V0E1 NOS2 NCF1 NitritePeroxynitriteLatent infection ofHomo sapiens withMycobacteriumtuberculosisL-ArgPeptide-MethionineH+Zn2+ GSNOATP6V0C H+H+ATP6V0D1 L-CitNOX2 complexH+ATP6V1D ATP6V0A2 NCF2 NOS3 hydroperoxylATP6V1G2 ATP6V0E2 NO+ATP6V0A1 heme CYBA ATP6V1C1 ATP6V1F ATP6V1G3 ATP6V1G1 NOS1,2,3ATP6V1B1 ATP6V1B2 SLC11A1CYBB hemeATP6V0A4 Fe2+ 4, 10, 16, 26


Description

The first line of defense against infectious agents involves an active recruitment of phagocytes to the site of infection. Recruited cells include polymorhonuclear (PMN) leukocytes (i.e., neutrophils) and monocytes/macrophages, which function together as innate immunity sentinels (Underhill DM & Ozinsky A 2002; Stuart LM & Ezekowitz RA 2005; Flannagan RS et al. 2012). Dendritic cells are also present, serving as important players in antigen presentation for ensuing adaptive responses (Savina A & Amigorena S 2007). These cell types are able to bind and engulf invading microbes into a membrane-enclosed vacuole - the phagosome, in a process termed phagocytosis. Phagocytosis can be defined as the receptor-mediated engulfment of particles greater than 0.5 micron in diameter. It is initiated by the cross-linking of host cell membrane receptors following engagement with their cognate ligands on the target surface (Underhill DM & Ozinsky A 2002; Stuart LM & Ezekowitz RA 2005; Flannagan RS et al. 2012). When engulfed by phagocytes, microorganisms are exposed to a number of host defense microbicidal events within the resulting phagosome. These include the production of reactive oxygen and nitrogen species (ROS and RNS, RONS) by specialized enzymes (Fang FC et al. 2004; Kohchi C et al. 2009; Gostner JM et al. 2013; Vatansever F et al. 2013). NADPH oxidase (NOX) complex consume oxygen to produce superoxide radical anion (O2.-) and hydrogen peroxide (H2O2) (Robinson et al. 2004). Induced NO synthase (iNOS) is involved in the production of NO, which is the primary source of all RNS in biological systems (Evans TG et al. 1996). The NADPH phagocyte oxidase and iNOS are expressed in both PMN and mononuclear phagocytes and both cell types have the capacity for phagosomal burst activity. However, the magnitude of ROS generation in neutrophils far exceeds that observed in macrophages (VanderVen BC et al. 2009). Macrophages are thought to produce considerably more RNS than neutrophils (Fang FC et al. 2004; Nathan & Shiloh 2000).

The presence of RONS characterized by a relatively low reactivity, such as H2O2, O2˙− or NO, has no deleterious effect on biological environment (Attia SM 2010; Weidinger A & and Kozlov AV 2015) Their activity is controlled by endogenous antioxidants (both enzymatic and non-enzymatic) that are induced by oxidative stress. However the relatively low reactive species can initiate a cascade of reactions to generate more damaging “secondary� species such as hydroxyl radical (•OH), singlet oxygen or peroxinitrite (Robinson JM 2008; Fang FC et al. 2004). These "secondary" RONS are extremely toxic causing irreversible damage to all classes of biomolecules (Weidinger A & and Kozlov AV 2015; Fang FC et al. 2004; Kohchi C et al. 2009; Gostner JM et al. 2013; Vatansever F et al. 2013).<p>Although macrophages and neutrophils use similar mechanisms for the internalization of targets, there are differences in how they perform phagocytosis and in the final outcome of the process (Tapper H & Grinstein S 1997; Vierira OV et al. 2002). Once formed, the phagosome undergoes an extensive maturation process whereby it develops into a microbicidal organelle able to eliminate the invading pathogen. Maturation involves re-modeling both the membrane of the phagosome and its luminal contents (Vierira OV et al. 2002). In macrophages, phagosome formation and maturation follows a series of strictly coordinated membrane fission/fusion events between the phagosome and compartments of the endo/lysosomal network gradually transforming the nascent phagosome into a phagolysosome, a degradative organelle endowed with potent microbicidal properties (Zimmerli S et al. 1996; Vierira OV et al. 2002). Neutrophils instead contain a large number of preformed granules such as azurophilic and specific granules that can rapidly fuse with phagosomes delivering antimicrobial substances (Karlsson A & Dahlgren C 2002; Naucler C et al. 2002; Nordenfelt P and Tapper H 2011). Phagosomal pH dynamics may also contribute to the maturation process by regulating membrane traffic events. The microbicidal activity of macrophages is characterized by progressive acidification of the lumen (down to pH 4–5) by the proton pumping vATPase. A low pH is a prerequisite for optimal enzymatic activity of most late endosomal/lysosomal hydrolases reported in macrophages. Neutrophil phagosome pH regulation differs significantly from what is observed in macrophages (Nordenfelt P and Tapper H 2011; Winterbourn CC et al. 2016). The massive activation of the oxidative burst is thought to result in early alkalization of neutrophil phagosomes which is linked to proton consumption during the generation of hydrogen peroxide (Segal AW et al. 1981; Levine AP et al. 2015). Other studies showed that neutrophil phagosome maintained neutral pH values before the pH gradually decreased (Jankowski A et al. 2002). Neutrophil phagosomes also exhibited a high proton leak, which was initiated upon activation of the NADPH oxidase, and this activation counteracted phagosomal acidification (Jankowski A et al. 2002).<p>The Reactome module describes ROS and RNS production by phagocytic cells. The module includes cell-type specific events, for example, myeloperoxidase (MPO)-mediated production of hypochlorous acid in neutrophils. It also highlights differences between phagosomal pH dynamics in neutrophils and macrophages. The module describes microbicidal activity of selective RONS such as hydroxyl radical or peroxynitrite however the mechanisms by which reactive oxygen/nitrogen species kill pathogens is still a matter of debate. View original pathway at:Reactome.</div>

Comments

Reactome-Converter 
Pathway is converted from Reactome ID: 1222556
Reactome-version 
Reactome version: 62
Reactome Author 
Reactome Author: Stephan, Ralf

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History

View all...
CompareRevisionActionTimeUserComment
114846view16:35, 25 January 2021ReactomeTeamReactome version 75
113292view11:36, 2 November 2020ReactomeTeamReactome version 74
112852view13:10, 12 October 2020DeSlOntology Term : 'immune response pathway' added !
112851view13:10, 12 October 2020DeSlOntology Term : 'phagocyte' added !
112850view13:09, 12 October 2020DeSlOntology Term : 'disease by infectious agent' added !
112504view15:46, 9 October 2020ReactomeTeamReactome version 73
101416view11:30, 1 November 2018ReactomeTeamreactome version 66
100954view21:06, 31 October 2018ReactomeTeamreactome version 65
100491view19:40, 31 October 2018ReactomeTeamreactome version 64
100036view16:24, 31 October 2018ReactomeTeamreactome version 63
99589view14:58, 31 October 2018ReactomeTeamreactome version 62 (2nd attempt)
99209view12:43, 31 October 2018ReactomeTeamreactome version 62
94500view09:06, 14 September 2017Mkutmonreactome version 61
83441view12:25, 18 November 2015ReactomeTeamNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
ATP6V0A1 ProteinQ93050 (Uniprot-TrEMBL)
ATP6V0A2 ProteinQ9Y487 (Uniprot-TrEMBL)
ATP6V0A4 ProteinQ9HBG4 (Uniprot-TrEMBL)
ATP6V0B ProteinQ99437 (Uniprot-TrEMBL)
ATP6V0C ProteinP27449 (Uniprot-TrEMBL)
ATP6V0D1 ProteinP61421 (Uniprot-TrEMBL)
ATP6V0D2 ProteinQ8N8Y2 (Uniprot-TrEMBL)
ATP6V0E1 ProteinO15342 (Uniprot-TrEMBL)
ATP6V0E2 ProteinQ8NHE4 (Uniprot-TrEMBL)
ATP6V1A ProteinP38606 (Uniprot-TrEMBL)
ATP6V1B1 ProteinP15313 (Uniprot-TrEMBL)
ATP6V1B2 ProteinP21281 (Uniprot-TrEMBL)
ATP6V1C1 ProteinP21283 (Uniprot-TrEMBL)
ATP6V1C2 ProteinQ8NEY4 (Uniprot-TrEMBL)
ATP6V1D ProteinQ9Y5K8 (Uniprot-TrEMBL)
ATP6V1E1 ProteinP36543 (Uniprot-TrEMBL)
ATP6V1E2 ProteinQ96A05 (Uniprot-TrEMBL)
ATP6V1F ProteinQ16864 (Uniprot-TrEMBL)
ATP6V1G1 ProteinO75348 (Uniprot-TrEMBL)
ATP6V1G2 ProteinO95670 (Uniprot-TrEMBL)
ATP6V1G3 ProteinQ96LB4 (Uniprot-TrEMBL)
ATP6V1H ProteinQ9UI12 (Uniprot-TrEMBL)
CYBA ProteinP13498 (Uniprot-TrEMBL)
CYBB ProteinP04839 (Uniprot-TrEMBL)
Divalent metals

transported by

NRAMP1
ComplexR-ALL-445829 (Reactome)
Divalent metals

transported by

NRAMP1
ComplexR-ALL-445832 (Reactome)
FAD MetaboliteCHEBI:16238 (ChEBI)
Fe2+ MetaboliteCHEBI:18248 (ChEBI)
Fe2+MetaboliteCHEBI:18248 (ChEBI)
FeHMMetaboliteCHEBI:36144 (ChEBI)
GSHMetaboliteCHEBI:16856 (ChEBI)
GSNOMetaboliteCHEBI:50091 (ChEBI)
H+MetaboliteCHEBI:15378 (ChEBI)
L-ArgMetaboliteCHEBI:32682 (ChEBI)
L-CitMetaboliteCHEBI:16349 (ChEBI)
Latent infection of

Homo sapiens with Mycobacterium

tuberculosis
PathwayR-HSA-1222352 (Reactome) Infection by Mycobacterium tuberculosis (Mtb) is soon countered by the host's immune system, the organism is however almost never eradicated; ten per cent of infections will develop into "open tuberculosis", while the other ninety per cent become "latent", a state that can persist for decades until loss of immune control. A third of the world's population is estimated to harbour latent tuberculosis. Latent infection involves the bacterium being internalized by macrophages where it stops and counters the innate immune answer (Russell 2011, Russell et al. 2010). When a status-quo is reached, Mtb enters a non-replicating persistent state (Barry et al. 2009, Boshoff & Barry 2005).
Mn2+ MetaboliteCHEBI:29035 (ChEBI)
NADP+MetaboliteCHEBI:18009 (ChEBI)
NADPHMetaboliteCHEBI:16474 (ChEBI)
NCF1 ProteinP14598 (Uniprot-TrEMBL)
NCF2 ProteinP19878 (Uniprot-TrEMBL)
NCF4 ProteinQ15080 (Uniprot-TrEMBL)
NO+MetaboliteCHEBI:29120 (ChEBI)
NOMetaboliteCHEBI:16480 (ChEBI)
NOS1 ProteinP29475 (Uniprot-TrEMBL)
NOS1,2,3ComplexR-HSA-419294 (Reactome)
NOS2 ProteinP35228 (Uniprot-TrEMBL)
NOS3 ProteinP29474 (Uniprot-TrEMBL)
NOX2 complexComplexR-HSA-1222368 (Reactome)
NitriteMetaboliteCHEBI:16301 (ChEBI)
O2.-MetaboliteCHEBI:18421 (ChEBI)
O2MetaboliteCHEBI:15379 (ChEBI)
Peptide-Methionine (S)-SulfoxideR-ALL-1222452 (Reactome)
Peptide-MethionineR-ALL-1222500 (Reactome)
PeroxynitriteMetaboliteCHEBI:25941 (ChEBI)
SLC11A1ProteinP49279 (Uniprot-TrEMBL)
TCIRG1 ProteinQ13488 (Uniprot-TrEMBL)
V-ATPaseComplexR-HSA-1222549 (Reactome)
Zn2+ MetaboliteCHEBI:29105 (ChEBI)
heme MetaboliteCHEBI:17627 (ChEBI)
hemeMetaboliteCHEBI:17627 (ChEBI)
hydroperoxylMetaboliteCHEBI:25935 (ChEBI)

Annotated Interactions

View all...
SourceTargetTypeDatabase referenceComment
Divalent metals

transported by

NRAMP1
ArrowR-HSA-435171 (Reactome)
Divalent metals

transported by

NRAMP1
R-HSA-435171 (Reactome)
FeHMR-HSA-1222512 (Reactome)
GSHR-HSA-1222384 (Reactome)
GSNOArrowR-HSA-1222384 (Reactome)
H+ArrowR-HSA-1222376 (Reactome)
H+ArrowR-HSA-1222384 (Reactome)
H+ArrowR-HSA-1222516 (Reactome)
H+ArrowR-HSA-435171 (Reactome)
H+R-HSA-1222353 (Reactome)
H+R-HSA-1222411 (Reactome)
H+R-HSA-1222516 (Reactome)
H+R-HSA-435171 (Reactome)
L-ArgR-HSA-418436 (Reactome)
L-CitArrowR-HSA-418436 (Reactome)
NADP+ArrowR-HSA-1222376 (Reactome)
NADP+ArrowR-HSA-418436 (Reactome)
NADPHR-HSA-1222376 (Reactome)
NADPHR-HSA-418436 (Reactome)
NO+ArrowR-HSA-1222512 (Reactome)
NO+R-HSA-1222384 (Reactome)
NOArrowR-HSA-1222662 (Reactome)
NOArrowR-HSA-1222686 (Reactome)
NOArrowR-HSA-418436 (Reactome)
NOR-HSA-1222407 (Reactome)
NOR-HSA-1222512 (Reactome)
NOR-HSA-1222662 (Reactome)
NOR-HSA-1222686 (Reactome)
NOS1,2,3mim-catalysisR-HSA-418436 (Reactome)
NOX2 complexmim-catalysisR-HSA-1222376 (Reactome)
NitriteArrowR-HSA-1222411 (Reactome)
O2.-ArrowR-HSA-1222376 (Reactome)
O2.-R-HSA-1222353 (Reactome)
O2.-R-HSA-1222407 (Reactome)
O2R-HSA-1222376 (Reactome)
O2R-HSA-418436 (Reactome)
Peptide-Methionine (S)-SulfoxideArrowR-HSA-1222411 (Reactome)
Peptide-MethionineR-HSA-1222411 (Reactome)
PeroxynitriteArrowR-HSA-1222407 (Reactome)
PeroxynitriteArrowR-HSA-1470073 (Reactome)
PeroxynitriteR-HSA-1222411 (Reactome)
PeroxynitriteR-HSA-1470073 (Reactome)
R-HSA-1222342 (Reactome) Superoxide can enter the bacterium when acidic conditions apply. Together with a proton it forms the hydroperoxyl radical (Nathan & Shiloh 2000, Zahrt & Deretic 2002, Warner & Mizrahi 2006, Spagnolo et al, 2004).
R-HSA-1222353 (Reactome) Superoxide gets protonated (Korshunov & Imlay 2002).
R-HSA-1222376 (Reactome) Macrophage NOX2 is a membrane complex that generates superoxide anions by reduction of oxygen with NADPH (Babior 1999, Dinauer et al. 1991).
R-HSA-1222384 (Reactome) In the host cell cytosol, glutathione (GSH) scavenges nitrosyl, yielding S-nitrosoglutathione (GSNO). Both GSH and GSNO are effective against Mtb (Venketaraman et al. 2005).
R-HSA-1222407 (Reactome) Nitric oxide and superoxide rapidly combine to form peroxynitrite (Pryor & Squadrito 1995).
R-HSA-1222411 (Reactome) Within the bacterial cell, peroxynitrite oxidizes methionine residues (Pryor et al. 1994).
R-HSA-1222512 (Reactome) Production of nitrosyl ion from nitric oxide is much faster when catalyzed by metal ions than via NO2 or N2O3. An alternative mechanism is by reaction with superoxide which is less probable in macrophages because they downregulate pathways leading to superoxide when NO is produced (Kharitonov et al. 1995, Clancy et al. 1994).
R-HSA-1222516 (Reactome) The function of V-type proton pumping ATPases is basically the same as that of F-type ATPases, except that V-ATPases cannot synthesize ATP from the proton motive force, the reverse reaction of pumping. When pumping, ATP hydrolysis drives a 120 degree rotation of the rotor which leads to movement of three protons into the phagosome (Adachi et al. 2007).
R-HSA-1222662 (Reactome) NO enters the bacterium (Clancy et al. 1994).
R-HSA-1222686 (Reactome) Nitric oxide diffuses into the phagosome (Clancy et al. 1994). Although NO has been shown to be critical for control of Mtb infection in mice, its role in human infection is less clear. Instead, the generation of antimicrobial defence molecules including cathelicidin in a vitamin D-dependent pathway is much better established (Fabri et al. 2011, Martineau et al. 2011).
R-HSA-1470073 (Reactome) Peroxynitrite can rapidly permeate biological membranes (Marla et al. 1997, Venugopal et al. 2011).
R-HSA-418436 (Reactome) Nitric oxide synthase (NOS) produces NO from L-arginine. There are three isoforms of NOS, endothelial, neuronal and inducible (eNOS, nNOS, and iNOS). eNOS and nNOS are constitutively expressed while iNOS is induced by immunostimulatory signals. The constitutive isoforms are regulated in vivo by the binding of calcium and calmodulin. NO produced by NOS acts as a signalling molecule by diffusing across cell membranes to activate soluble guanylate cyclase (sGC).
R-HSA-435171 (Reactome) Natural resistance-associated macrophage proteins (NRAMPs) regulate macrophage activation for antimicrobial activity against intracellular pathogens. They do this by mediating metal ion transport across macrophage membranes and the subsequent use of these ions in the control of free radical formation.
The human gene SLC11A1 encodes NRAMP1 (Kishi F, 2004; Kishi F and Nobumoto M, 1995) which can utilize the protonmotive force to mediate divalent iron (Fe2+), zinc (Zn2+) and manganese (Mn2+) influx to or efflux from phagosomes.
SLC11A1mim-catalysisR-HSA-435171 (Reactome)
V-ATPasemim-catalysisR-HSA-1222516 (Reactome)
hemeArrowR-HSA-1222512 (Reactome)
hydroperoxylArrowR-HSA-1222342 (Reactome)
hydroperoxylArrowR-HSA-1222353 (Reactome)
hydroperoxylR-HSA-1222342 (Reactome)

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