Glucosinolate biosynthesis (from aromatic amino acid) (Arabidopsis thaliana)

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3Phenylalanine, tyrosine and tryptophan biosynthesisL-PhenylalanineCYP79A2(E)-PhenylacetaldoximeS-(Phenylacetothiohydroximoyl)-L-cysteinePhenylacetothiohydroximateDesulfoglucotropeolinCYP83B1SUR1UGT74B11SOT162, 4L-TryptophanL-TyrosineBenzyl glucosinolateIndole-3-acetaldehyde oximeS-(Indolylmethylthiohydroximoyl)-L-cysteineCYP79A1L-HomophenylalanineCatalyst3-PhenylpropionaldoximMetaboliteCatalystMetaboliteCatalystMetaboliteCatalyst2-Phenylethyl glucosinolateCatalystCYP79B2CYP79B3IndolylmethylthiohydroximateSUR1Indolylmethyl-desulfoglucosinolateUGT74B113-indolylmethyl glucosinolate(E)-4-Hydroxyphenylacetaldehyde oximeS-(Hydroxyphenylacetothiohydroximoyl)-L-cysteinep-HydroxyphenylacetothiohydroximateSUR1p-HydroxybenzyldesulphoglucosinolateCatalystp-Hydroxybenzyl glucosinolate4-Hydroxy-3-indolylmethylglucosinolateCYP81F2CYP81F4Catalyst1-Hydroxy-3-indolylmethylglucosinolate1-Methoxy-3-indolylmethylglucosinolateO-methyltransferaseMetaboliteCYP81F3CYP81F14-Methoxy-3-indolylmethylglucosinolateindole glucosinolate methyltransferaseCYP83B1CYP83B1SOT16SOT162, 42, 4


Description

This pathway describes the glucosinolate derived from aromatic amino acid (Phe, Tyr, Trp) in Arabidopsis thaliana. This is based on the KEGG pathway and PlantCyc.

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Quality Tags

Ontology Terms

 

Bibliography

  1. Grubb CD, Zipp BJ, Ludwig-Mﾃｼller J, Masuno MN, Molinski TF, Abel S; ''Arabidopsis glucosyltransferase UGT74B1 functions in glucosinolate biosynthesis and auxin homeostasis.''; Plant J, 2004 PubMed Europe PMC Scholia
  2. Klein M, Papenbrock J; ''Kinetics and substrate specificities of desulfo-glucosinolate sulfotransferases in Arabidopsis thaliana.''; Physiol Plant, 2009 PubMed Europe PMC Scholia
  3. Wittstock U, Burow M; ''Glucosinolate breakdown in Arabidopsis: mechanism, regulation and biological significance.''; Arabidopsis Book, 2010 PubMed Europe PMC Scholia
  4. Klein M, Reichelt M, Gershenzon J, Papenbrock J; ''The three desulfoglucosinolate sulfotransferase proteins in Arabidopsis have different substrate specificities and are differentially expressed.''; FEBS J, 2006 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
105283view17:24, 26 July 2019KhanspersModified description
105269view21:07, 25 July 2019KhanspersOntology Term : 'classic metabolic pathway' added !
104458view04:02, 28 May 2019MikikotUse TAIR identification for gene product
104268view09:20, 14 May 2019AfukushimaModified title
104262view04:18, 14 May 2019MikikotModified description
104261view04:15, 14 May 2019MikikotNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
(E)-4-Hydroxyphenylacetaldehyde oximeMetaboliteC04350 (KEGG Compound)
(E)-PhenylacetaldoximeMetaboliteC19714 (KEGG Compound)
1-Hydroxy-3-indolylmethylglucosinolateMetabolite123131529 (PubChem-compound)
1-Methoxy-3-indolylmethylglucosinolateMetaboliteC00000126 (KNApSAcK)
2-Phenylethyl glucosinolateMetaboliteC08417 (KEGG Compound)
3-PhenylpropionaldoximMetaboliteC17236 (KEGG Compound)
3-indolylmethyl glucosinolateMetaboliteC00000125 (KNApSAcK)
4-Hydroxy-3-indolylmethylglucosinolateMetaboliteC00000127 (KNApSAcK)
4-Methoxy-3-indolylmethylglucosinolateMetaboliteC00000128 (KNApSAcK)
Benzyl glucosinolateMetaboliteCHEBI:17127 (ChEBI)
CYP79A1GeneProductK13027 (KEGG Genes)
CYP79A2GeneProductAT5G05260 (TAIR)
CYP79B2GeneProductAT4G39950 (TAIR)
CYP79B3GeneProductAT2G22330 (TAIR)
CYP81F1GeneProductAT4G37430 (TAIR)
CYP81F2GeneProductAT5G57220 (TAIR)
CYP81F3GeneProductAT4G37400 (TAIR)
CYP81F4GeneProductAT4G37410 (TAIR)
CYP83B1GeneProductAT4G31500 (TAIR)
CatalystGeneProduct
DesulfoglucotropeolinMetaboliteC01069 (KEGG Compound)
Indole-3-acetaldehyde oximeMetaboliteC02937 (KEGG Compound)
Indolylmethyl-desulfoglucosinolateMetaboliteC16517 (KEGG Compound)
IndolylmethylthiohydroximateMetaboliteC16516 (KEGG Compound)
L-HomophenylalanineMetaboliteC17235 (KEGG Compound)
L-PhenylalanineMetaboliteC00079 (KEGG Compound)
L-TryptophanMetaboliteC00078 (KEGG Compound)
L-TyrosineMetaboliteC00082 (KEGG Compound)
MetaboliteMetabolite
O-methyltransferaseGeneProductIGMT5 (TAIR)
PhenylacetothiohydroximateMetaboliteC03719 (KEGG Compound)
S-(Hydroxyphenylacetothiohydroximoyl)-L-cysteineMetaboliteC17238 (KEGG Compound)
S-(Indolylmethylthiohydroximoyl)-L-cysteineMetaboliteC16518 (KEGG Compound)
S-(Phenylacetothiohydroximoyl)-L-cysteineMetaboliteC17237 (KEGG Compound)
SOT16GeneProductAT1G74100 (TAIR)
SUR1GeneProductAT2G20610 (Gramene Arabidopsis)
SUR1GeneProductAT2G20610 (TAIR)
UGT74B1GeneProductAT1G24100 (TAIR)
indole glucosinolate methyltransferaseGeneProductIGMT1 (TAIR)
p-Hydroxybenzyl glucosinolateMetaboliteC08426 (KEGG Compound)
p-HydroxybenzyldesulphoglucosinolateMetaboliteC17240 (KEGG Compound)
p-HydroxyphenylacetothiohydroximateMetaboliteC17239 (KEGG Compound)

Annotated Interactions

No annotated interactions

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