Acetogenesis (Acetobacterium woodii)

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5,10-Methenyltetrahydrofolateacetyl-CoARnfBRnfAFdhF110-FormyltetrahydrofolateMetFAtpE5,10-MethylenetetrahydrofolatedihydrogenRnfDTetrahydrofolateHydA1Reduced ferredoxinRnfGRnfCNADHHydDRnfC2HycB2carbon dioxideHycB1Oxidised ferredoxinformatemethyl-Co(III) corrinoid Fe-S proteincarbon dioxideacetate5-MethyltetrahydrofolatehydrogenphosphateNAD(1-)Co(I) corrinoid Fe-S proteinATPHycB3hydroncarbon monooxideMetVADPRnfEHydA2HydBHydCNAD(1-)NADHATPADPhydrogenphosphateFdhF2HycB3HydA2MetFRnfGRnfDRnfARnfBRnfEhydrondihydrogenNADHNAD(1-)Reduced ferredoxinOxidised ferredoxinAtpBAtpHAtpFAtpDAtpCAtpGAtpA


Description

Acetogenesis from H2 and CO2 in Acetobacterium woodii

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Quality Tags

Ontology Terms

 

Bibliography

  1. Diender M, Stams AJ, Sousa DZ; ''Pathways and Bioenergetics of Anaerobic Carbon Monoxide Fermentation.''; Front Microbiol, 2015 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
120854view14:18, 20 January 2022DeSlOntology Term : 'carbon fixation pathway' added !
120853view14:16, 20 January 2022DeSlAdded ref, updated description
113882view02:17, 6 December 2020KhanspersOntology Term : 'classic metabolic pathway' added !
113587view12:24, 3 November 2020LarsgwClarify pathway branches
113580view01:11, 3 November 2020LarsgwAdd enzymes, update acetyl-CoA->acetate reaction
113458view11:53, 2 November 2020Larsgw
113056view14:43, 1 November 2020LarsgwAdd ATP synthase
113055view12:58, 1 November 2020LarsgwAdd some protein complexes
113054view23:43, 31 October 2020LarsgwAdd main pathway metabolites
113052view17:21, 31 October 2020LarsgwNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
10-FormyltetrahydrofolateMetaboliteCHEBI:15637 (ChEBI)
5,10-MethenyltetrahydrofolateMetaboliteCHEBI:15638 (ChEBI)
5,10-MethylenetetrahydrofolateMetaboliteCHEBI:1989 (ChEBI)
5-MethyltetrahydrofolateMetaboliteCHEBI:15641 (ChEBI)
ADPMetaboliteCHEBI:456216 (ChEBI)
ATPMetaboliteCHEBI:30616 (ChEBI)
AtpAProteinP50000 (Uniprot-TrEMBL) Subunit alpha
AtpBProteinQ9RMB6 (Uniprot-TrEMBL) Subunit a
AtpCProteinP50009 (Uniprot-TrEMBL) Subunit epsilon
AtpDProteinP50002 (Uniprot-TrEMBL) Subunit beta
AtpEProteinQ9RMB5 (Uniprot-TrEMBL) Subunit c
AtpFProteinQ9RMB4 (Uniprot-TrEMBL) Subunit b
AtpGProteinP50005 (Uniprot-TrEMBL) Subunit gamma
AtpHProteinQ9RMB3 (Uniprot-TrEMBL) Subunit delta
Co(I) corrinoid Fe-S proteinMetabolite
FdhF1ProteinH6LB59 (Uniprot-TrEMBL)
FdhF2ProteinH6LB61 (Uniprot-TrEMBL)
HycB1ProteinH6LB60 (Uniprot-TrEMBL)
HycB2ProteinH6LB62 (Uniprot-TrEMBL)
HycB3ProteinH6LB64 (Uniprot-TrEMBL)
HydA1ProteinH6LFG3 (Uniprot-TrEMBL)
HydA2ProteinH6LB65 (Uniprot-TrEMBL)
HydBProteinH6LFG4 (Uniprot-TrEMBL)
HydCProteinH6LFG7 (Uniprot-TrEMBL)
HydDProteinH6LFG5 (Uniprot-TrEMBL)
MetFProteinH6LBX9 (Uniprot-TrEMBL)
MetVProteinH6LBX8 (Uniprot-TrEMBL)
NAD(1-)MetaboliteCHEBI:57540 (ChEBI)
NADHMetaboliteCHEBI:16908 (ChEBI)
Oxidised ferredoxinMetaboliteCHEBI:17908 (ChEBI)
Reduced ferredoxinMetaboliteCHEBI:17513 (ChEBI)
RnfAProteinH6LC28 (Uniprot-TrEMBL)
RnfBProteinH6LC27 (Uniprot-TrEMBL)
RnfC2ProteinH6LBX7 (Uniprot-TrEMBL)
RnfCProteinH6LC32 (Uniprot-TrEMBL)
RnfDProteinH6LC31 (Uniprot-TrEMBL)
RnfEProteinH6LC29 (Uniprot-TrEMBL)
RnfGProteinH6LC30 (Uniprot-TrEMBL)
TetrahydrofolateMetaboliteCHEBI:20506 (ChEBI)
acetateMetaboliteCHEBI:30089 (ChEBI)
acetyl-CoAMetaboliteCHEBI:15351 (ChEBI)
carbon dioxideMetaboliteCHEBI:16526 (ChEBI)
carbon monooxideMetaboliteCHEBI:17245 (ChEBI)
dihydrogenMetaboliteCHEBI:18276 (ChEBI)
formateMetaboliteCHEBI:15740 (ChEBI)
hydrogenphosphateMetaboliteCHEBI:43474 (ChEBI)
hydronMetaboliteCHEBI:15378 (ChEBI)
methyl-Co(III) corrinoid Fe-S proteinMetabolite

Annotated Interactions

No annotated interactions

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