Lycopene biosynthesis (Zea mays)
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1
EC:1.3.5.5 (PDS)
EC:2.5.1.32 (PSY)
geranyl-geranyl diphosphate
15,9-cis-phytofluene
15-cis-phytoene
1
1
1
1
1
EC:1.3.5.5 (PDS)
9,15,9'-tri-cis-ζ-carotene
1
1
EC:5.2.1.12 (Z-ISO)
1
9,9'-di-cis-ζ-carotene
1
EC:1.3.5.6 (ZDS)
1
7,9,9'-cis-neurosporene
1
EC:5.2.1.13 (CRITSO)
9'-cis-neurosporene
1
1
7',9'-cis-lycopene
1
all-trans-lycopene
1
EC:5.2.1.13 (CRITSO)
EC:1.3.5.6 (ZDS)
1
1
Description
No description
Comments
A series of desaturation processes leads to the formation of lycopene. All trans-lycopene feeds into the carotenoid bio
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Compare
Revision
Action
Time
User
Comment
123061
view
03:22, 23 June 2022
Egonw
Made a pathway clickable
107276
view
14:36, 17 September 2019
MaintBot
ChEBI identifier normalization
92826
view
20:18, 8 July 2017
AlexanderPico
Updated incorrect PubChem-compound id
92825
view
20:16, 8 July 2017
AlexanderPico
Fixed ChEBI to PubChem-compound
92821
view
19:42, 8 July 2017
AlexanderPico
Manually reverted incorrect database changes to Affy
92796
view
21:31, 6 July 2017
AlexanderPico
Fixed metabolite Xrefs back to ChEBI
92790
view
15:03, 6 July 2017
DeSl
Quick edit to datanode annotation or property
85695
view
22:24, 5 June 2016
AlexanderPico
removed over 100 references to the same ontology tag
70145
view
21:27, 12 July 2013
MaintBot
updated to 2013 schema
68772
view
16:23, 7 July 2013
Egonw
Fixed "EC number" and a PubChem-compound data sources.
67436
view
11:01, 26 June 2013
Ddigles
Ontology Term : 'lycopene biosynthetic pathway' added !
48861
view
19:21, 22 June 2012
AlexanderPico
Modified categories
48662
view
19:16, 8 June 2012
Pjaiswal
modified positions and added genes
48549
view
18:37, 4 June 2012
Pjaiswal
Modified description
48532
view
19:42, 1 June 2012
Pjaiswal
Ontology Term : 'carotenoid biosynthetic pathway' added !
48531
view
19:40, 1 June 2012
Pjaiswal
Specify description
48530
view
19:36, 1 June 2012
Pjaiswal
alignments
48529
view
19:34, 1 June 2012
Pjaiswal
alignments
48528
view
19:30, 1 June 2012
Pjaiswal
box size changed
48527
view
19:25, 1 June 2012
Pjaiswal
added references
48526
view
19:20, 1 June 2012
Pjaiswal
Periodical save, work in progress
48525
view
19:00, 1 June 2012
Pjaiswal
Periodical save, work in progress
48524
view
18:49, 1 June 2012
Pjaiswal
New pathway
External references
DataNodes
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Name
Type
Database reference
Comment
15,9-cis-phytofluene
Metabolite
61990 (ChEBI)
15-cis-phytoene
Metabolite
27787 (ChEBI)
7',9'-cis-lycopene
Metabolite
25245411 (CAS)
7,9,9'-cis-neurosporene
Metabolite
62463 (ChEBI)
9'-cis-neurosporene
Metabolite
21606092 (CAS)
9,15,9'-tri-cis-ζ-carotene
Metabolite
48717 (ChEBI)
9,9'-di-cis-ζ-carotene
Metabolite
48716 (ChEBI)
EC:1.3.5.5 (PDS)
GeneProduct
1.3.5.5
EC:1.3.5.5 (PDS)
GeneProduct
1.3.5.5 (EC Number)
EC:1.3.5.6 (ZDS)
GeneProduct
1.3.5.6 (EC Number)
EC:2.5.1.32 (PSY)
GeneProduct
2.5.1.32 (EC Number)
EC:5.2.1.12 (Z-ISO)
GeneProduct
5.2.1.12 (EC Number)
EC:5.2.1.13 (CRITSO)
GeneProduct
5.2.1.13 (EC Number)
all-trans-lycopene
Metabolite
15948 (ChEBI)
geranyl-geranyl diphosphate
Metabolite
15831 (ChEBI)
Annotated Interactions
No annotated interactions
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