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From WikiPathways

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The Semantic Web WikiPathways comes in two flavors: as RDF (beta) and as nanopublications (very experimental).

The RDF

You can download the WikiPathways RDF from here.

The WikiPathways RDF is split in two parts, the GPMLRDF part which contains a direct translation of the content in the GPML files, and a WPRDF part which contains harmonized biological information present in the GPML.

This figure from the 2016 paper shows how the WPRDF can be derived from the GPMLRDF: