Sandbox pathway test (Homo sapiens)

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561NucleusSubstrateSubstrateADPCatalystTCA CycleTP53D-GlucoseCalciumAKAP2Substrate éMIR338BRCA1BRCA2MMPéCatalystProductProductMitochondriaP2, 34BRCA1Alpha-D-GlucoseATP


Description

This is just one test pathway with a variety of object types including datanodes which can be annotated with database entries. Feel free to edit anything on this page. (updated) testing

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View approved pathways at the new wikipathways.org.

Quality Tags

Ontology Terms

 

Bibliography

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  1. Pico AR, Kelder T, van Iersel MP, Hanspers K, Conklin BR, Evelo C; ''WikiPathways: pathway editing for the people.''; PLoS Biol, 2008 PubMed Europe PMC Scholia
  2. Kelder T, Conklin BR, Evelo CT, Pico AR; ''Finding the right questions: exploratory pathway analysis to enhance biological discovery in large datasets.''; PLoS Biol, 2010 PubMed Europe PMC Scholia
  3. Kelder T, van Iersel MP, Hanspers K, Kutmon M, Conklin BR, Evelo CT, Pico AR; ''WikiPathways: building research communities on biological pathways.''; Nucleic Acids Res, 2012 PubMed Europe PMC Scholia
  4. Talépéoo; ''Test''; Test, 2018
  5. MMP2è; ''Test''; Test, 2018
  6. Kelder T, Pico AR, Hanspers K, van Iersel MP, Evelo C, Conklin BR; ''Mining biological pathways using WikiPathways web services.''; PLoS One, 2009 PubMed Europe PMC Scholia

History

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CompareRevisionActionTimeUserComment
127891view20:21, 8 January 2024KhanspersReverted to version '20:13, 8 January 2024' by Khanspers
127890view20:19, 8 January 2024Khanspersadding nodes
127889view20:13, 8 January 2024KhanspersTestdeleted node
127888view20:11, 8 January 2024Khanspersremoved shape
127550view20:43, 19 October 2023KhanspersOntology Term : 'Kawasaki disease' added !
127132view16:50, 5 August 2023Khanspersremoved node with the Kelder et al 2010 reference
127129view17:02, 4 August 2023Khanspersadding lit ref back
127128view16:57, 4 August 2023Khanspersremoved lit ref
127078view00:30, 29 July 2023Khanspersupdated description
125974view13:39, 23 March 2023Mkutmontest
125799view13:46, 10 March 2023Mkutmontest
125798view13:41, 10 March 2023Mkutmontest
125797view13:40, 10 March 2023Mkutmontest
125414view07:53, 13 February 2023MkutmonTest
123009view18:33, 16 June 2022FinterlyOntology Term : 'Disease' added !
123008view18:33, 16 June 2022FinterlyOntology Term : 'DOID:4' removed !
122262view16:16, 16 March 2022Khansperstest2
122261view16:16, 16 March 2022Khansperstest
121201view12:54, 11 February 2022DeSlModified description
121191view00:55, 11 February 2022KhanspersModified description
121187view17:11, 10 February 2022KhanspersModified description
121147view19:16, 9 February 2022KhanspersModified description
121146view18:11, 9 February 2022KristinaTestModified description
121144view17:04, 9 February 2022KhanspersModified description
121087view15:01, 7 February 2022Mkutmontest
119193view17:17, 21 June 2021FinterlyReverted to version '09:08, 31 May 2021' by Finterly
119192view17:13, 21 June 2021Finterlyremoved é temporarily
119191view16:23, 21 June 2021FinterlyReverted to version '09:08, 31 May 2021' by Finterly
119190view16:19, 21 June 2021Finterlytemp for test
119189view16:17, 21 June 2021FinterlyTemporary change for a test
119188view15:41, 21 June 2021FinterlyTemporary test
118619view09:08, 31 May 2021FinterlyFixed Ensembl linkout
118071view10:42, 24 May 2021EweitzModified title
116380view09:52, 6 May 2021Mkutmon
116379view09:52, 6 May 2021Mkutmon
116378view09:51, 6 May 2021Mkutmontesting
116165view18:38, 14 April 2021MkutmonModified description
116154view09:32, 14 April 2021Mkutmontest update description
111234view03:51, 27 July 2020Khansperstesting
111233view03:50, 27 July 2020KhanspersModified description
111151view20:36, 20 July 2020Khansperstest
110830view12:03, 11 June 2020MkutmonModified description
108828view21:54, 31 January 2020KhanspersReverted to version '21:53, 31 January 2020' by Khanspers
108827view21:54, 31 January 2020KhanspersModified description
108826view21:53, 31 January 2020KhanspersModified description
108238view21:02, 1 December 2019AdminTesterModified description
107922view18:50, 11 November 2019KhanspersModified title
107397view18:50, 4 October 2019Khansperstesting
107346view19:25, 26 September 2019Khansperstest
107325view17:44, 23 September 2019AlexanderPicocleaning sandbox

External references

DataNodes

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NameTypeDatabase referenceComment
ADPMetaboliteHMDB01508 (HMDB)
AKAP2GeneProduct11217 (Entrez Gene)
ATPMetabolite
Alpha-D-GlucoseProtein
BRCA1GeneProductENSG00000012048 (Ensembl)
BRCA2GeneProductENSG00000139618 (Ensembl)
CalciumMetaboliteHMDB00464 (HMDB) At least xx needed.
CatalystGeneProduct
D-GlucoseMetabolite
MIR338RnaENSG00000211563 (Ensembl)
MMPéGeneProductENSG00000087245 (Ensembl)
ProductMetabolite
SubstrateMetabolite
Substrate éMetaboliteundefined (Ensembl)
TCA CyclePathwayWP78 (WikiPathways)
TP53GeneProductENSG00000141510 (Ensembl)

Annotated Interactions

SourceTargetTypeDatabase referenceComment
BRCA1mim-conversion10003 (Rhea)
Retrieved from "https://classic.wikipathways.org/index.php/Pathway:WP4"
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