Gibberellin A12 biosynthesis (Solanum lycopersicum)

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1ent-copalyl diphosphate synthaseall-trans-geranyl-geranyl diphosphateMetaboliteent-copalyl diphosphateent-kaur-16-en-19-olent-kaur-16-eneent-7-α-hydroxykaurenoateent-kaurenoateGA12-aldehydeGA12ent-kaurene synthaseent-kaurene oxidaseent-kaurenoic acid oxidaseent-kaur-16-en-19-alent-kaurene oxidase


Description

Pathway that describes the biosynthesis of gibberellin A12 (GA12).

Comments

 
This pathway has been manually created based on Lycocyc content

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Quality Tags

Ontology Terms

 

Bibliography

  1. Naithani S, Raja R, Waddell EN, Elser J, Gouthu S, Deluc LG, Jaiswal P; ''VitisCyc: a metabolic pathway knowledgebase for grapevine (Vitis vinifera).''; Front Plant Sci, 2014 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
127033view22:30, 24 July 2023Khanspersupdated enzyme labels, layout, consolidated duplicated nodes
107269view14:36, 17 September 2019MaintBotChEBI identifier normalization
102904view13:51, 27 January 2019EgonwModified description
102903view13:51, 27 January 2019EgonwModified title
102902view13:50, 27 January 2019EgonwAdded the literature reference (source) and missing GA12 identifier.
102901view13:42, 27 January 2019EgonwCorrect ChEBI identifier.
102012view14:52, 26 November 2018DeSlChanged ID for ent-kaur-16-en-19-ol, was linked to Pubchem ID for Tris(3-chloropropyl)phosphate?
87516view01:53, 25 July 2016AlexanderPicoOntology Term : 'classic metabolic pathway' added !
73874view19:14, 26 February 2014MaintBotconnected lines
73645view23:47, 11 February 2014LarsEijssenNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
GA12-aldehydeMetaboliteCHEBI:15610 (ChEBI)
GA12MetaboliteQ27104111 (Wikidata)
Metaboliteent-copalyl diphosphateMetaboliteCHEBI:28151 (ChEBI)
all-trans-geranyl-geranyl diphosphateMetaboliteCHEBI:48861 (ChEBI)
ent-7-α-hydroxykaurenoateMetaboliteCHEBI:15419 (ChEBI)
ent-copalyl diphosphate synthaseGeneProduct5.5.1.13 (Enzyme Nomenclature)
ent-kaur-16-en-19-alMetaboliteCHEBI:15418 (ChEBI)
ent-kaur-16-en-19-olMetaboliteQ27089429 (Wikidata)
ent-kaur-16-eneMetaboliteCHEBI:15415 (ChEBI)
ent-kaurene oxidaseGeneProduct1.14.13.78 (Enzyme Nomenclature)
ent-kaurene synthaseGeneProduct4.2.3.19 (Enzyme Nomenclature)
ent-kaurenoateMetaboliteCHEBI:15417 (ChEBI)
ent-kaurenoic acid oxidaseGeneProduct1.14.13.79 (Enzyme Nomenclature)

Annotated Interactions

No annotated interactions
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