Sickle cell disease (Homo sapiens)

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Description

This pathway shows the molecular pathophysiology of sickle cell disease.

(A) A single–nucleotide variant in the β-globin gene replaces glutamic acid with valine at position 6 of the β-globin chain. Upon deoxygenation, the resulting hemoglobin S (HbS) molecules polymerize into rigid fibers, driving erythrocyte sickling (clockwise).

(B) Sickled cells cause impaired blood rheology and enhanced adhesion of erythrocytes to neutrophils, platelets, and the endothelium, leading to slowed or obstructed microvascular flow -- called vaso-occlusion. Vaso-occlusion in turn promotes ischemia-reperfusion (I-R) injury (clockwise).

(C) HbS polymer formation also leads to red cell membrane damage and hemolysis (counterclockwise), releasing cell-free hemoglobin (Hb) into circulation. Oxygenated Hb (Fe²⁺) contributes to endothelial dysfunction by consuming nitric oxide (NO) and producing nitrate (NO₃⁻) and methemoglobin (Fe³⁺). Hb can also undergo Fenton chemistry with H₂O₂, generating hydroxyl radicals (•OH) and additional methemoglobin. Methemoglobin (Fe³⁺) can degrade and release cell-free heme (counterclockwise), a potent erythrocyte-derived DAMP.

(D) ROS production, TLR4 activation, NET formation, release of tissue- or cell-derived DAMPs, extracellular DNA, and other yet-undefined mediators generated by cell-free heme or I-R injury can induce sterile inflammation by activating the inflammasome in vascular and immune cells, leading to IL-1β release. Sterile inflammation then reinforces vaso-occlusion through a positive feedback loop that increases neutrophil, platelet, and endothelial adhesiveness.

Inspired by figure 1 in [Sundd 2018](https://pmc.ncbi.nlm.nih.gov/articles/PMC7053558/#S2).

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Ontology Terms

 

Bibliography

  1. Sundd P, Gladwin MT, Novelli EM; ''Pathophysiology of Sickle Cell Disease.''; Annu Rev Pathol, 2019 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
142382view16:34, 30 January 2026DeSlOntology Term : 'cardiovascular system disease pathway' added !
142381view16:33, 30 January 2026DeSlOntology Term : 'disease pathway' added !
142380view16:32, 30 January 2026DeSlAdded ID for IL18
142334view09:43, 23 January 2026DdiglesDNA damage incorrectly linked to wikidata ischemia/reperfusion injury. Updated to link to DNA damage instead.
142198view01:56, 13 December 2025KhanspersOntology Term : 'DOID:0081445' removed !
141502view08:33, 16 November 2025EgonwAdded two more identifiers
141501view08:30, 16 November 2025EgonwMore unicode
141474view13:04, 15 November 2025EweitzRefine state position
141473view13:03, 15 November 2025EweitzRefine label position
141472view13:01, 15 November 2025EweitzOntology Term : 'platelet' added !
141471view13:01, 15 November 2025EweitzOntology Term : 'endothelial cell' added !
141470view13:01, 15 November 2025EweitzOntology Term : 'neutrophil' added !
141469view13:00, 15 November 2025EweitzOntology Term : 'erythrocyte' added !
141468view13:00, 15 November 2025EweitzModified description
141467view12:59, 15 November 2025EweitzModified description
141466view12:55, 15 November 2025EweitzAdd section IDs
141465view12:42, 15 November 2025EweitzClear cached dimensions
141464view12:41, 15 November 2025EweitzEconomize layout
141462view12:38, 15 November 2025EweitzRefine state position
141461view12:37, 15 November 2025EweitzRefine node type, align
141460view12:32, 15 November 2025EweitzAdd literature reference
141459view12:30, 15 November 2025EweitzEconomize layout
141458view12:27, 15 November 2025EweitzAdd more background containers
141457view12:15, 15 November 2025EweitzSimplify interactions
141456view12:14, 15 November 2025EweitzRefine low- and high-oxygen effects
141455view12:09, 15 November 2025EweitzRemove legend, add container for vaso-occlusion
141454view11:57, 15 November 2025EweitzAdd gene identifiers
141453view11:45, 15 November 2025EweitzAdd gene identifiers
141452view00:10, 15 November 2025EweitzConnect vaso-occlusion and sterile inflammation
141450view16:52, 14 November 2025EweitzRefine big labels to pathways, add inflammasome
141449view16:29, 14 November 2025EweitzStart "Sterile inflammation" section
141448view15:55, 14 November 2025EweitzRefine orientation of heme, iron, oxygen relative to globin
141447view15:46, 14 November 2025EweitzBind heme to globin
141446view15:26, 14 November 2025EweitzDetail endothelial dysfunction
141439view12:27, 14 November 2025EweitzRefine endothelial dysfunction nodes, overall graphics
141429view01:59, 14 November 2025EweitzAdd iron, oxygen, bonds
141428view01:35, 14 November 2025EweitzAdd heme, refine graphics
141427view01:23, 14 November 2025EweitzRefine graphics
141426view01:09, 14 November 2025EweitzRefine graphics
141425view00:55, 14 November 2025EweitzAdd hemolysis graphic
141419view13:07, 13 November 2025EweitzLabel erythrocyte
141418view12:56, 13 November 2025EweitzColor cell types
141417view12:01, 13 November 2025Ash iyerOntology Term : 'sickle cell disease' added !
141416view12:01, 13 November 2025Ash iyerOntology Term : 'sickle cell anemia' added !
141415view04:10, 13 November 2025EweitzAdd neutrophils, platelets
141414view03:53, 13 November 2025EweitzAdd sickle cell prototype, endothelial cells
141413view03:28, 13 November 2025EweitzAdd headings
141412view03:24, 13 November 2025EweitzAdd Hb polymer bundles, hemolysis, sickling
141411view01:38, 13 November 2025EweitzAdd legend with other hemoglobins
141410view12:30, 12 November 2025EweitzNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
DNA damageQ5205747 (Wikidata)
Damage-associated

molecular patterns

(DAMPs)
PathwayDamage-associated molecular patterns (DAMPs)
Endothelial dysfunctionPathway
Fe²⁺MetaboliteCHEBI:29033 (ChEBI)
Fe³⁺MetaboliteCHEBI:29034 (ChEBI)
HBA1GeneProductENSG00000206172 (Ensembl)
HBA2GeneProductENSG00000188536 (Ensembl)
HBBGeneProductENSG00000244734 (Ensembl)
Hb polymer bundlesGeneProductENSG00000244734 (Ensembl)
HbS polymerizationPathway
HemeMetaboliteCHEBI:30413 (ChEBI)
HemolysisQ471706 (Wikidata)
H₂O₂MetaboliteCHEBI:16240 (ChEBI)
IL18GeneProductENSG00000150782 (Ensembl)
IL1BGeneProductENSG00000125538 (Ensembl)
Ischemia-reperfusion injuryQ100611440 (Wikidata)
NOMetaboliteCHEBI:16480 (ChEBI)
NO₃⁻MetaboliteCHEBI:17632 (ChEBI)
Neutrophil

extracellular

traps (NETs)
Pathway
OHMetaboliteCHEBI:29191 (ChEBI)
O₂MetaboliteCHEBI:15379 (ChEBI)
ROSMetaboliteCHEBI:26523 (ChEBI)
Sterile inflammationPathway
TLR4GeneProductENSG00000136869 (Ensembl)
Vaso-occlusionPathway

Annotated Interactions

No annotated interactions

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