Eukaryotic translation elongation (Homo sapiens)

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123cytosoleEF1B:GDP exchange complexeEF1B complexOrthophosphateeEF2:GTPOrthophosphateeEF1B alphaElongation complex with growing peptide chaineEF1A:GDPeEF1A:GTP:aminoacyl-tRNA complex80S:Met-tRNAi:mRNA:aminoacyl-tRNAGTPeEF1B beta80S ribosomeeEF2:GDPeEF2eEF1A80S:Met-tRNAi:mRNA80S:aminoacyl tRNA:mRNA:eEF1A:GTPGTPAminoacyl-tRNAeEF1A:GTP80S Ribosome:mRNA:peptidyl-tRNA with elongating peptideeEF1B gamma


Description

The translation elongation cycle adds one amino acid at a time to a growing polypeptide according to the sequence of codons found in the mRNA. The next available codon on the mRNA is exposed in the aminoacyl-tRNA (aa-tRNA) binding site (A site) on the 30S subunit.
A: Ternary complexes of aa -tRNA:eEF1A:GTP enter the ribosome and enable the anticodon of the tRNA to make a codon/anticodon interaction with the A-site codon of the mRNA. B: Upon cognate recognition, the eEF1A:GTP is brought into the GTPase activating center of the ribosome, GTP is hydrolyzed and eEF1A:GDP leaves the ribosome. C: The peptidyl transferase center of ribosome catalyses the formation of a peptide bond between the incoming amino acid and the peptide found in the peptidyl-tRNA binding site (P site). D: In the pre-translocation state of the ribosome, the eEF2:GTP enters the ribosome, physically translocating the peptidyl-tRNA out of the A site to P site and leaves the ribosome eEF2:GDP. This action of eEF2:GTP accounts for the precise movement of the mRNA by 3 nucleotides.Consequently, deacylated tRNA is shifted to the E site. A ribosome associated ATPase activity is proposed to stimulate the release of deacylated tRNA from the E site subsequent to translocation (Elskaya et al., 1991). In this post-translocation state, the ribosome is now ready to receive a new ternary complex.
This process is illustrated below with: an amino acyl-tRNA with an amino acid, a peptidyl-tRNA with a growing peptide, a deacylated tRNA with an -OH, and a ribosome with A,P and E sites to accommodate these three forms of tRNA.

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Ontology Terms

 

Bibliography

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  1. Carvalho MD, Carvalho JF, Merrick WC.; ''Biological characterization of various forms of elongation factor 1 from rabbit reticulocytes.''; PubMed Europe PMC Scholia
  2. Pérez JM, Siegal G, Kriek J, Hård K, Dijk J, Canters GW, Möller W.; ''The solution structure of the guanine nucleotide exchange domain of human elongation factor 1beta reveals a striking resemblance to that of EF-Ts from Escherichia coli.''; PubMed Europe PMC Scholia
  3. Van Ness BG, Howard JB, Bodley JW.; ''ADP-ribosylation of elongation factor 2 by diphtheria toxin. Isolation and properties of the novel ribosyl-amino acid and its hydrolysis products.''; PubMed Europe PMC Scholia
  4. Veremieva M, Khoruzhenko A, Zaicev S, Negrutskii B, El'skaya A.; ''Unbalanced expression of the translation complex eEF1 subunits in human cardioesophageal carcinoma.''; PubMed Europe PMC Scholia
  5. Guillot D, Penin F, Di Pietro A, Sontag B, Lavergne JP, Reboud JP.; ''GTP binding to elongation factor eEF-2 unmasks a tryptophan residue required for biological activity.''; PubMed Europe PMC Scholia
  6. Van Ness BG, Howard JB, Bodley JW.; ''ADP-ribosylation of elongation factor 2 by diphtheria toxin. NMR spectra and proposed structures of ribosyl-diphthamide and its hydrolysis products.''; PubMed Europe PMC Scholia
  7. Kapp LD, Lorsch JR.; ''The molecular mechanics of eukaryotic translation.''; PubMed Europe PMC Scholia

History

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CompareRevisionActionTimeUserComment
117719view12:33, 22 May 2021EweitzModified title
114891view16:40, 25 January 2021ReactomeTeamReactome version 75
113337view11:41, 2 November 2020ReactomeTeamReactome version 74
112548view15:51, 9 October 2020ReactomeTeamReactome version 73
101462view11:32, 1 November 2018ReactomeTeamreactome version 66
101000view21:12, 31 October 2018ReactomeTeamreactome version 65
100536view19:46, 31 October 2018ReactomeTeamreactome version 64
100083view16:30, 31 October 2018ReactomeTeamreactome version 63
99634view15:02, 31 October 2018ReactomeTeamreactome version 62 (2nd attempt)
99240view12:44, 31 October 2018ReactomeTeamreactome version 62
93857view13:41, 16 August 2017ReactomeTeamreactome version 61
93420view11:23, 9 August 2017ReactomeTeamreactome version 61
86508view09:19, 11 July 2016ReactomeTeamreactome version 56
83399view11:07, 18 November 2015ReactomeTeamVersion54
81592view13:08, 21 August 2015ReactomeTeamVersion53
77053view08:35, 17 July 2014ReactomeTeamFixed remaining interactions
76758view12:11, 16 July 2014ReactomeTeamFixed remaining interactions
76083view10:14, 11 June 2014ReactomeTeamRe-fixing comment source
75793view11:32, 10 June 2014ReactomeTeamReactome 48 Update
75143view14:09, 8 May 2014AnweshaFixing comment source for displaying WikiPathways description
74790view08:52, 30 April 2014ReactomeTeamReactome46
69032view17:50, 8 July 2013MaintBotUpdated to 2013 gpml schema
45249view18:35, 7 October 2011AlexanderPicoOntology Term : 'translation elongation pathway' added !
42034view21:51, 4 March 2011MaintBotAutomatic update
39837view05:52, 21 January 2011MaintBotNew pathway

External references

DataNodes

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NameTypeDatabase referenceComment
80S Ribosome:mRNA:

peptidyl-tRNA with elongating peptide

ComplexREACT_4835 (Reactome)
80S ribosome ComplexREACT_4330 (Reactome)
80S:Met-tRNAi:

mRNA

ComplexREACT_4537 (Reactome)
80S:Met-tRNAi:

mRNA:aminoacyl- tRNA

ComplexREACT_3365 (Reactome)
80S:aminoacyl tRNA:

mRNA:eEF1A:GTP

ComplexREACT_5558 (Reactome)
Aminoacyl-tRNA MetaboliteREACT_4792 (Reactome)
Elongation complex

with growing peptide chain

ComplexREACT_5024 (Reactome)
GTP Metabolite15996 (ChEBI)
Orthophosphate Metabolite18367 (ChEBI)
eEF1A ProteinP68104 (UniProt)
eEF1A:GDP ComplexREACT_5872 (Reactome)
eEF1A:GTP ComplexREACT_3513 (Reactome)
eEF1A:GTP:

aminoacyl-tRNA complex

ComplexREACT_3062 (Reactome)
eEF1B alpha ProteinP24534 (UniProt)
eEF1B beta ProteinP29692 (UniProt)
eEF1B complex ComplexREACT_3047 (Reactome)
eEF1B gamma ProteinP26641 (UniProt)
eEF1B:GDP

exchange complex

ComplexREACT_3385 (Reactome)
eEF2 ProteinP13639 (UniProt)
eEF2:GDP ComplexREACT_5865 (Reactome)
eEF2:GTP ComplexREACT_2807 (Reactome)

Annotated Interactions

No annotated interactions

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