Lycopene biosynthesis (Zea mays)

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1, 2EC:1.3.5.5 (PDS)15,9-cis-phytofluene15-cis-phytoeneEC:2.5.1.32 (PSY)geranyl-geranyl diphosphate22222EC:1.3.5.5 (PDS)29,15,9'-tri-cis-ζ-carotene2EC:5.2.1.12 (Z-ISO)1, 29,9'-di-cis-ζ-carotene2EC:1.3.5.6 (ZDS)7,9,9'-cis-neurosporene22EC:5.2.1.13 (CRITSO)29'-cis-neurosporene27',9'-cis-lycopene2all-trans-lycopeneEC:5.2.1.13 (CRITSO)2EC:1.3.5.6 (ZDS)22


Description

No description

Comments

 
A series of desaturation processes leads to the formation of lycopene. All trans-lycopene feeds into the carotenoid biosynthesis.

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Quality Tags

Ontology Terms

 

Bibliography

No bibliography


History

View all...
CompareRevisionActionTimeUserComment
123061view03:22, 23 June 2022EgonwMade a pathway clickable
107276view14:36, 17 September 2019MaintBotChEBI identifier normalization
92826view20:18, 8 July 2017AlexanderPicoUpdated incorrect PubChem-compound id
92825view20:16, 8 July 2017AlexanderPicoFixed ChEBI to PubChem-compound
92821view19:42, 8 July 2017AlexanderPicoManually reverted incorrect database changes to Affy
92796view21:31, 6 July 2017AlexanderPicoFixed metabolite Xrefs back to ChEBI
92790view15:03, 6 July 2017DeSlQuick edit to datanode annotation or property
85695view22:24, 5 June 2016AlexanderPicoremoved over 100 references to the same ontology tag
70145view21:27, 12 July 2013MaintBotupdated to 2013 schema
68772view16:23, 7 July 2013EgonwFixed "EC number" and a PubChem-compound data sources.
67436view11:01, 26 June 2013DdiglesOntology Term : 'lycopene biosynthetic pathway' added !
48861view19:21, 22 June 2012AlexanderPicoModified categories
48662view19:16, 8 June 2012Pjaiswalmodified positions and added genes
48549view18:37, 4 June 2012PjaiswalModified description
48532view19:42, 1 June 2012PjaiswalOntology Term : 'carotenoid biosynthetic pathway' added !
48531view19:40, 1 June 2012PjaiswalSpecify description
48530view19:36, 1 June 2012Pjaiswalalignments
48529view19:34, 1 June 2012Pjaiswalalignments
48528view19:30, 1 June 2012Pjaiswalbox size changed
48527view19:25, 1 June 2012Pjaiswaladded references
48526view19:20, 1 June 2012PjaiswalPeriodical save, work in progress
48525view19:00, 1 June 2012PjaiswalPeriodical save, work in progress
48524view18:49, 1 June 2012PjaiswalNew pathway

External references

DataNodes

View all...
NameTypeDatabase referenceComment
15,9-cis-phytoflueneMetabolite61990 (ChEBI)
15-cis-phytoeneMetabolite27787 (ChEBI)
7',9'-cis-lycopeneMetabolite25245411 (CAS)
7,9,9'-cis-neurosporeneMetabolite62463 (ChEBI)
9'-cis-neurosporeneMetabolite21606092 (CAS)
9,15,9'-tri-cis-ζ-caroteneMetabolite48717 (ChEBI)
9,9'-di-cis-ζ-caroteneMetabolite48716 (ChEBI)
EC:1.3.5.5 (PDS)GeneProduct1.3.5.5
EC:1.3.5.5 (PDS)GeneProduct1.3.5.5 (EC Number)
EC:1.3.5.6 (ZDS)GeneProduct1.3.5.6 (EC Number)
EC:2.5.1.32 (PSY)GeneProduct2.5.1.32 (EC Number)
EC:5.2.1.12 (Z-ISO)GeneProduct5.2.1.12 (EC Number)
EC:5.2.1.13 (CRITSO)GeneProduct5.2.1.13 (EC Number)
all-trans-lycopeneMetabolite15948 (ChEBI)
geranyl-geranyl diphosphateMetabolite15831 (ChEBI)

Annotated Interactions

No annotated interactions
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