Histidine, purine, and pyrimidine superpathway (Saccharomyces cerevisiae)
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ArcPathVisio
Brace
Ellipse
EndoplasmicReticulum
GolgiApparatus
HexagonPathVisio
MimDegradation
Mitochondria
Octagon
PentagonPathVisio
Rectangle
RoundedRectangle
SarcoplasmicReticulum
TriangleEquilateralEast
TrianglePathVisio
none
AMP
phosphoribosyl-ATP
H2O
phosphoribosyl-AMP
phosphoribosylformiminoAICAR-phosphate
H2O
phosphoribulosylformimino-AICAR-P
D-erythro-imidazole-glycerol-phosphate
H2O
imidazole acetol-phosphate
2-oxoglutarate
H2O
histidinol
NAD
H+
histidinal
H2O
NAD
H+
THF
phosphoribosyl-formamido-carboxamide
H2O
IMP
NAD
H2O
H2O
AMP
NH3
AMP
reduced thioredoxin
H2O
oxidized thioredoxin
deoxy-GTP
reduced flavodoxin
oxidized flavodoxin
H2O
H2O
5-phosphoribosylamine
5-phospho-ribosyl-glycineamide
THF
5âÂÂ-phosphoribosyl-N-formylglycineamide
H2O
5-phosphoribosyl-n-formylglycineamidine
5âÂÂ-phosphoribosyl-5-aminoimidazole
phosphoribosyl-carboxy-aminoimidazole
H2O
CO2
L-aspartate
5âÂÂ-phosphoribosyl-4-(N-
sucinocarboxamide)-5-aminoimidazole
fumerate
orotidine-5âÂÂ-phosphate
orotate
dihydroorotate
acceptor
reduced acceptor
carbamoyl-L-aspartate
H2O
L-aspartate
carbamoyl-phosphate
H+
HCO3
H2O
CO2
UMP
UDP
UTP
H2O
CTP
PRS1
PRS2
PRS3
PRS4
PRS5
HIS1
HIS4
HIS4
HIS6
HIS3
HIS5
HIS2
HIS4
HIS4
ADE17
ADE16
ADE17
ADE16
IMD2
IMD3
IMD4
GUA1
RNR3
RNR4
RNR1
RNR2
YNK1
GUK1
ADE4
ADE5,7
ADE8
ADE6
ADE5,7
ADE2
ADE1
ADE13
URA5
URA10
URA1
URA4
URA2
URA2
URA3
URA6
URA8
URA7
YNK1
ribose-5-phosphate
ATP
PRPP
ATP
phosphate
pyrophosphate
L-glutamine
L-glutamate
L-glutamate
L-histidinol-phosphate
phosphate
NADH
NADH
L-histidine
AICAR
10-formyl-THF
NADH
xanthosine-5-phosphate
ATP
L-glutamine
pyrophosphate
L-glutamate
ATP
pyrophosphate
GMP
GDP
ATP
ADP
dGDP
ATP
ADP
GTP
ATP
ADP
L-glutamine
L-glutamate
pyrophosphate
L-glycine
ATP
phosphate
ADP
10-formyl-THF
L-glutamate
ADP
phosphate
L-glutamine
ATP
ATP
phosphate
ADP
ATP
ADP
phosphate
ATP
phosphate
ADP
pyrophosphate
phosphate
L-glutamine
2 ATP
2 ADP
phosphate
L-glutamate
ATP
ADP
ATP
ADP
ATP
L-glutamine
L-glutamate
ADP
phosphate
CDP
ADP
ATP
Name: Superpathway of Histidine, Purine, and Pyrimidine
Organism: Saccharomyces cerevisiae
Description
No description
Comments
GenMAPP remarks
Based on
http://pathway.yeastgenome.org/biocyc/
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Ontology Terms
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Pathway Ontology
:
disease pathway
Disease
:
congenital heart disease
oculocerebrorenal syndrome
male infertility
juvenile myoclonic epilepsy
Senior-Loken syndrome
Pallister-Hall syndrome
Bardet-Biedl syndrome
sensorineural hearing loss
Carpenter syndrome
hydrolethalus syndrome
cone-rod dystrophy
asphyxiating thoracic dystrophy
holoprosencephaly
nephronophthisis
orofaciodigital syndrome
infertility
ciliopathy
retinitis pigmentosa
Leber congenital amaurosis
Greig cephalopolysyndactyly syndrome
primary ciliary dyskinesia
Meckel syndrome
Ellis-Van Creveld syndrome
medulloblastoma
lethal congenital contracture syndrome
Birt-Hogg-Dube syndrome
polycystic kidney disease
Joubert syndrome
Cell Type
:
Bibliography
''Histidine, purine, and pyrimidine superpathway''; YeastPathways,
History
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Compare
Revision
Action
Time
User
Comment
139567
view
05:31, 22 June 2025
Egonw
Modified description
139566
view
05:30, 22 June 2025
Egonw
More unicode
135544
view
20:00, 23 September 2024
Khanspers
Modified description
135448
view
21:58, 5 September 2024
Khanspers
Ontology Term : 'classic metabolic pathway' added !
135447
view
21:58, 5 September 2024
Khanspers
removed GenMAPP comments
135446
view
21:57, 5 September 2024
Khanspers
135445
view
21:56, 5 September 2024
Khanspers
lit ref
135314
view
00:05, 17 August 2024
Khanspers
interactions
122754
view
05:17, 10 May 2022
Egonw
Added identifiers to water nodes
117345
view
11:53, 20 May 2021
Eweitz
Modified title
107259
view
14:35, 17 September 2019
MaintBot
ChEBI identifier normalization
94664
view
13:18, 4 October 2017
DeSl
Changed ribose-5-P label to D-ribose-5-P
94663
view
13:17, 4 October 2017
DeSl
Connected all lines, changed all textlabels to metabolite nodes, connected all genes to the lines.
93079
view
09:22, 28 July 2017
Elisa
Fixed some of the unconnected interactions (left side of the pathway).
93011
view
14:46, 24 July 2017
DeSl
Changed wrong CAS number (salt) for correct ChEBI ID
85638
view
16:11, 4 June 2016
Egonw
Fixed the CAS number.
71897
view
10:35, 22 October 2013
Mkutmon
changed AICAR from Unknown to Metabolite
70270
view
21:50, 15 July 2013
MaintBot
updated to 2013 schema
69872
view
18:00, 11 July 2013
Egonw
Marked a few DataNodes with CAS registry numbers as metabolites.
67670
view
11:47, 26 June 2013
Ddigles
Ontology Term : 'nucleotide metabolic pathway' added !
41803
view
04:48, 2 March 2011
MaintBot
Removed redundant pathway information and comments
21558
view
11:32, 14 November 2008
MaintBot
[[Pathway:Saccharomyces cerevisiae:Superpathway of Histidine Purine and Pyrimidine Biosynthesis]] moved to [[Pathway:WP416]]: Moved to stable identifier
12861
view
08:06, 17 May 2008
MaintBot
automated metabolite conversion
8948
view
14:13, 7 January 2008
MaintBot
Added to category $category
8946
view
14:13, 7 January 2008
M.Braymer
Uploaded new pathway
External references
DataNodes
View all...
Name
Type
Database reference
Comment
10-formyl-THF
Metabolite
2800-34-2 (CAS)
2 ADP
Metabolite
58-64-0 (CAS)
2 ATP
Metabolite
1927-31-7 (CAS)
ADE13
GeneProduct
S000004351 (SGD)
ADE16
GeneProduct
S000004018 (SGD)
ADE17
GeneProduct
S000004727 (SGD)
ADE1
GeneProduct
S000000070 (SGD)
ADE2
GeneProduct
S000005654 (SGD)
ADE4
GeneProduct
S000004915 (SGD)
ADE5,7
GeneProduct
S000003203 (SGD)
ADE6
GeneProduct
S000003293 (SGD)
ADE8
GeneProduct
S000002816 (SGD)
ADP
Metabolite
58-64-0 (CAS)
AICAR
Metabolite
3031-94-5 (CAS)
ATP
Metabolite
1927-31-7 (CAS)
CDP
Metabolite
63-38-7 (CAS)
GDP
Metabolite
146-91-8 (CAS)
GMP
Metabolite
85-32-5 (CAS)
GTP
Metabolite
2564-35-4 (CAS)
GUA1
GeneProduct
S000004830 (SGD)
GUK1
GeneProduct
S000001550 (SGD)
HIS1
GeneProduct
S000000857 (SGD)
HIS2
GeneProduct
S000001921 (SGD)
HIS3
GeneProduct
S000005728 (SGD)
HIS4
GeneProduct
S000000535 (SGD)
HIS5
GeneProduct
S000001378 (SGD)
HIS6
GeneProduct
S000001282 (SGD)
IMD2
GeneProduct
S000001259 (SGD)
IMD3
GeneProduct
S000004424 (SGD)
IMD4
GeneProduct
S000004520 (SGD)
L-glutamate
Metabolite
56-86-0 (CAS)
L-glutamine
Metabolite
56-85-9 (CAS)
L-glycine
Metabolite
56-40-6 (CAS)
L-histidine
Metabolite
71-001 (CAS)
L-histidinol-phosphate
Metabolite
25679-93-0 (CAS)
NADH
Metabolite
53-84-9 (CAS)
PRPP
Metabolite
97-55-2 (CAS)
PRS1
GeneProduct
S000001664 (SGD)
PRS2
GeneProduct
S000000901 (SGD)
PRS3
GeneProduct
S000001003 (SGD)
PRS4
GeneProduct
S000000164 (SGD)
PRS5
GeneProduct
S000005422 (SGD)
RNR1
GeneProduct
S000000872 (SGD)
RNR2
GeneProduct
S000003563 (SGD)
RNR3
GeneProduct
S000001328 (SGD)
RNR4
GeneProduct
S000003412 (SGD)
URA10
GeneProduct
S000004884 (SGD)
URA1
GeneProduct
S000001699 (SGD)
URA2
GeneProduct
S000003666 (SGD)
URA3
GeneProduct
S000000747 (SGD)
URA4
GeneProduct
S000004412 (SGD)
URA5
GeneProduct
S000004574 (SGD)
URA6
GeneProduct
S000001507 (SGD)
URA7
GeneProduct
S000000135 (SGD)
URA8
GeneProduct
S000003864 (SGD)
YNK1
GeneProduct
S000001550 (SGD)
dGDP
Metabolite
102783-74-4 (CAS)
phosphate
Metabolite
14265-44-2 (CAS)
pyrophosphate
Metabolite
2466-09-3 (CAS)
ribose-5-phosphate
Metabolite
3615-55-2 (CAS)
xanthosine-5-phosphate
Metabolite
523-98-8 (CAS)
Annotated Interactions
No annotated interactions
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