Calvin cycle (Populus trichocarpa)

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ArcPathVisio Brace Ellipse EndoplasmicReticulum GolgiApparatus HexagonPathVisio MimDegradation Mitochondria Octagon PentagonPathVisio Rectangle RoundedRectangle SarcoplasmicReticulum TriangleEquilateralEast TrianglePathVisio none carbonic anhydrasetransketolaseglyceraldehyde-3-phosphate dehydrogenasephosphoglycerate kinasecarbonic acidcarbon dioxidefructose-1,6-bisphosphatefructose-6-phosphatefructose-1,6-bisphosphatasexylulose-5-phosphateribulose-5-phosphate-3-epimerasedihydroxy-acetone phosphateerythrose-4-phosphatesedoheptulose-1,7-bisphosphatasephosphoribulokinasesedoheptulose-1,7-bisphosphataseRuBisCORuBisCO subunit bindingRuBisCO activase3-phosphoglycerateglyceraldehyde-3-phosphateribose-5-phosphatealdolaseribulose-1,5-bisphosphateribulose-5-phosphateCHOLOROPLAST1,3-bisphosphoglyceratetransketolasealdolasesedoheptulose-7-bisphosphataseribulose-5-phosphate epimeraseADPATPNADP+NADPHADPATPName: Calvin cycleOrganism: Populus trichocarpa


Description

No description

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Quality Tags

Image:Curated.pngReview changes for Approved
Image:Featured.pngReview changes for Featured

Ontology Terms

Pathway Ontology : photosynthesis pathway
 

Bibliography

  1. Bohler S, Sergeant K, Lefèvre I, Jolivet Y, Hoffmann L, Renaut J, Dizengremel P, Hausman JF; ''Differential impact of chronic ozone exposure on expanding and fully expanded poplar leaves.''; Tree Physiol, 2010 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
102771
Approved
Featured
view21:10, 23 January 2019EgonwFixed the casing of two ChEBI identifiers (prefix should be CHEBI: instead of ChEBI:)
86996view14:39, 15 July 2016MkutmonOntology Term : 'photosynthesis pathway' added !
78143view13:17, 5 December 2014AnweshaFixed metabolite annotation
78141view12:58, 5 December 2014AnweshaAnnotated enzymes
78140view12:54, 5 December 2014AnweshaFixed Mmetabolite labels, annotations, and protein annotations
77740view12:59, 16 October 2014SbohlerModified description
77739view12:58, 16 October 2014SbohlerModified description
77731view12:39, 16 October 2014AnweshaAdded literature reference
77724view12:25, 16 October 2014SbohlerModified description
77720view12:16, 16 October 2014AnweshaNew pathway

External references

DataNodes

View all...
Name  ↓Type  ↓Database reference  ↓Comment  ↓
1,3-bisphosphoglycerateMetaboliteC00236 (KEGG Compound)
3-phosphoglycerateMetaboliteCHEBI:17050 (ChEBI)
ADPMetaboliteCHEBI:16761 (ChEBI)
ATPMetaboliteCHEBI:15422 (ChEBI)
NADP+MetaboliteCHEBI:18009 (ChEBI)
NADPHMetaboliteCHEBI:16474 (ChEBI)
RuBisCO activaseProteinA9PFQ2 (Uniprot-TrEMBL)
RuBisCO subunit bindingProteinB9HQD5 (Uniprot-TrEMBL)
RuBisCOProteinB9GXY0 (Uniprot-TrEMBL)
aldolaseProteinA9PJC9 (Uniprot-TrEMBL)
carbon dioxideMetaboliteCHEBI:16526 (ChEBI)
carbonic acidMetaboliteCHEBI:28976 (ChEBI)
carbonic anhydraseProteinQ41088 (Uniprot-TrEMBL)
dihydroxy-acetone phosphateMetabolite
erythrose-4-phosphateMetabolite
fructose-1,6-bisphosphataseProtein
fructose-1,6-bisphosphateMetabolite
fructose-6-phosphateMetabolite
glyceraldehyde-3-phosphate dehydrogenaseProteinQ9SNX8 (Uniprot-TrEMBL)
glyceraldehyde-3-phosphateMetaboliteCHEBI:17050 (ChEBI)
phosphoglycerate kinaseProteinB9HY29 (Uniprot-TrEMBL)
phosphoribulokinaseProtein
ribose-5-phosphateMetaboliteCHEBI:17050 (ChEBI)
ribulose-1,5-bisphosphateMetaboliteCHEBI:17050 (ChEBI)
ribulose-5-phosphate epimeraseProtein
ribulose-5-phosphate-3-epimeraseProtein
ribulose-5-phosphateMetaboliteCHEBI:17050 (ChEBI)
sedoheptulose-1,7-bisphosphataseProtein
sedoheptulose-7-bisphosphataseMetabolite
transketolaseProteinB9GPE7 (Uniprot-TrEMBL)
xylulose-5-phosphateMetabolite

Annotated Interactions

No annotated interactions

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