Flavonoid pathway (Arabidopsis thaliana)

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22,6,7,4'-TetrahydroxyisoflavanoneRXN-5276-HydroxluteolinCyanidin 3-sophorosideCyanidin 3-(6''-(E)-p-coumarylsambubioside)-5-glucosideCatalyst8C-Glucosyl-2,7,4'- trihydroxyisoflavanoneGenistinGenkwaninCatalystApigenin 7,4'-dimethyl ether7,4'-Dihydroxy-3'-methoxyflavone5,7-DimethoxyapigeninLuteolin[Epicatechin-(4beta->8)]4-epicatechinPrunin7,3',4'-TrihydroxyflavoneProcyanidin C1Luteolin 4',7-diglucosideDaidzein 7-glucosideHesperetin7,4'-Dihydroxy-6-methoxyisoflavone, GlyciteinNaringinDihydrokaempferolCosmosiinProcyanidin B2CatalystCyanidin 3-(6-p-coumaroylglucoside)-5-(6-malonylglucoside)CatalystVestitoneLiquiritigenincatechinCyanidin 3,5-di-O-glucosideEriodictyol6,7,4'-Trihydroxyflavanone6-Hydroxydaidzein6-MethoxyluteolinDiosmetin 7-glucosideCatalystCyanidin 3-(6-p-coumaroylglucoside)CatalystBiochanin AApigeninRXN-1484Puerarin2',4',5,7-TetrahydroxyisoflavanoneNARINGENIN-3- DIOXYGENASE-RXNDaidzeinFormononetinHomoeriodictyolCyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-O-(glucosyl)-p-coumaroyl) glucoside] 5-O-glucosideHesperetin 7-neohesperidosideHesperetin 7-glucosideRXN-7775Diosmetin 7-neohesperidosidedihydroquercetin, TaxifolinApigenin 7-rutinoside(+)-epicatechinFormononetin 7-GlucosideProductScutellarein 7-glucuronideLuteolin 3',7-diglucosideCyanidin 3-glucosidePrunetinGenisteinCatalystCyanidinLuteolin 5,7-diglucosideAcacetinScutellareinCyanidin 3-(6-p-coumaroylglucoside)-5-glucosideCatalystLiquiritinCatalystCyanidin 3-O-[2''-O-(2'''-O-(sinapoyl) xylosyl) 6''-O-(p-O-(glucosyl) p-coumaroyl) glucoside] 5-O-glucosideRXN-525p-Coumaroyl-CoA2,7,4'-Trihydroxyiso- flavanone7,3'-Dihydroxy-4'-methoxyflavoneRXN-7652Catalyst7,4'-Dihydroxyflavone7,2'-Dihydroxy-4'-methoxy-isoflavanolIsoliquiritigenin2'-HydroxyformononetinCatalystNaringeninCatalystNaringenin chalconeDiosmetin 7-rutinosideHesperidinCinnamtannin A1Luteolin 7-glucosideEpicatechin-(4beta->8)5-epicatechinLeucocyanidinCatalyst4'-MethylluteolinBiochanin A 7-glucosideNaringenin 4'- O-glucosideepicatechin heptamerMedicarpinCyanidin 3-O-[2-O-(2-O-(sinapoyl)-bata-D-xylopyranosyl) 6-O-(4-O-(beta-D-glucopyranosyl)-p-coumaroyl-bata-D-glucopyranoside] 5-O-[6-O-(malonyl) bata-D-glucopyranoside]Luteolin 4'-glucoside7-Hydroxy-3',4'-dimethoxyflavone


Description

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Quality Tags

Ontology Terms

 

Bibliography

  1. Saito K, Yonekura-Sakakibara K, Nakabayashi R, Higashi Y, Yamazaki M, Tohge T, Fernie AR; ''The flavonoid biosynthetic pathway in Arabidopsis: structural and genetic diversity.''; Plant Physiol Biochem, 2013 PubMed Europe PMC Scholia
  2. Brazier-Hicks M, Evans KM, Gershater MC, Puschmann H, Steel PG, Edwards R; ''The C-glycosylation of flavonoids in cereals.''; J Biol Chem, 2009 PubMed Europe PMC Scholia

History

View all...
CompareRevisionActionTimeUserComment
118336view13:14, 27 May 2021Mkutmonpublication ref
103424view11:59, 28 February 2019DeSlVertical allignment, moved reactions closer together for readability.
103423view11:46, 28 February 2019DeSlHorizontal layout
103422view11:34, 28 February 2019DeSlUpdated layout left hand side
103421view10:02, 28 February 2019DeSlChanged layout (righthand side and middle).
103027view08:25, 1 February 2019TokimatsuFix Annotations.
103026view07:31, 1 February 2019TokimatsuFix interactions, topology and labels.
102670view01:37, 17 January 2019TokimatsuFix interactions and labels.
102669view01:20, 17 January 2019TokimatsuFix interactions.
102644view08:49, 16 January 2019Tokimatsuremove reactions/metabolites undiscovered from Brassicaceae. Add reaction IDs.
102628view07:23, 15 January 2019Tokimatsuremove reactions/metabolites undiscovered from Brassicaceae
101938view04:31, 19 November 2018EgonwRemoved "undefined" as data source.
96270view07:16, 3 March 2018EgonwFixed the syntax of a KNApSAcK ID (too many zeros).
95486view10:25, 18 December 2017DeSlChanged all arrows to MIM-type conversion.
95484view10:01, 18 December 2017DeSlConnected unconnected line
95445view07:27, 15 December 2017Kozo2add rhea annotation
92987view18:09, 21 July 2017Khanspersconnected interaction
92901view09:46, 15 July 2017EgonwModified description
87496view01:43, 25 July 2016AlexanderPicoOntology Term : 'classic metabolic pathway' added !
87495view01:43, 25 July 2016AlexanderPicoOntology Term : 'flavonoid biosynthetic pathway' added !
87428view12:10, 22 July 2016Kozo2replace Kaempferol ID from KNApSAcK to PubChem-compound
87330view11:42, 21 July 2016Kozo2test direct xml editing
87319view00:24, 21 July 2016AlexanderPicoupdated ID for Cyanidin
87251view10:45, 20 July 2016Kozo2Quick edit to datanode annotation or property
86212view18:16, 6 July 2016Kozo2Quick edit to datanode annotation or property
86211view17:44, 6 July 2016Kozo2Quick edit to datanode annotation or property
86210view17:34, 6 July 2016Kozo2Quick edit to datanode annotation or property
86007view07:57, 24 June 2016Kozo2Quick edit to datanode annotation or property
84960view19:00, 3 April 2016Kozo2confirm the feasibility of updating ID mappings from local pathvisio bridge
84959view17:46, 3 April 2016Kozo2replace non-KNApSAcK IDs to KNApSAcK
84958view16:42, 3 April 2016Kozo2replace non-KNApSAcK IDs to KNApSAcK
84957view15:55, 3 April 2016Kozo2assign KNApSAcK IDs to Apigenin derivative
84956view15:27, 3 April 2016Kozo2assign KNApSAcK IDs to Liquiritigenin derivative
84955view13:44, 3 April 2016Kozo2assign KNApSAcK IDs to Genistein derivative
84954view13:04, 3 April 2016Kozo2assign KNApSAcK IDs to Eriodictyol derivative
84953view11:08, 3 April 2016Kozo2assign KNApSAcK IDs to Luteolin derivative
84950view05:24, 3 April 2016Kozo2assign KNApSAcK IDs to Cyanidine derivative
84947view17:11, 2 April 2016Kozo2assign KNApSAcK IDs to Isorhamnetin derivative
84944view04:30, 2 April 2016Kozo2assign KNApSAcK IDs to Quercetin derivative
84943view03:55, 2 April 2016Kozo2assign KNApSAcK IDs to Kaempferol derivative
84942view03:38, 2 April 2016Kozo2assign KNApSAcK IDs to Kaempferol derivative
84890view01:48, 31 March 2016Kozo2assign KNApSAcK IDs to the compounds under Isoliquiritigenin
84889view23:50, 30 March 2016Kozo2Quick edit to datanode annotation or property
84888view23:49, 30 March 2016Kozo2assign KNApSAcK IDs to catechins
84872view08:34, 29 March 2016Kozo2Test updating KNApSAcK ID from PathVisio
84831view14:12, 24 March 2016Kozo2Quick edit to datanode annotation or property
84830view13:28, 24 March 2016Kozo2Quick edit to datanode annotation or property
84829view12:49, 24 March 2016Kozo2Quick edit to datanode annotation or property
84827view10:16, 24 March 2016Kozo2Quick edit to datanode annotation or property
84781view09:52, 20 March 2016EgonwChanged the data source from a metabolite to PubChem-compound.

External references

DataNodes

View all...
NameTypeDatabase referenceComment
(+)-epicatechinMetaboliteC00000956 (KNApSAcK)
2',4',5,7-TetrahydroxyisoflavanoneMetaboliteC00034377 (KNApSAcK)
2'-HydroxyformononetinMetaboliteC00000257 (KNApSAcK)
2,6,7,4'-TetrahydroxyisoflavanoneMetabolite
2,7,4'-Trihydroxyiso- flavanoneMetaboliteC15567 (KEGG Compound)
2-HydroxynaringeninMetabolite58124-18-8 (CAS)
3-O-MethylquercetinMetaboliteC00004632 (KNApSAcK)
4'-MethylluteolinMetaboliteC00001036 (KNApSAcK)
5,7-DimethoxyapigeninMetabolite
6,7,4'-TrihydroxyflavanoneMetabolite
6-HydroxluteolinMetaboliteC00003884 (KNApSAcK)
6-HydroxydaidzeinMetaboliteC00009385 (KNApSAcK)
6-MethoxyluteolinMetaboliteC00003885 (KNApSAcK)
6C-Glucosyl-2- hydroxynaringeninMetabolite90657396 (PubChem-compound)
7,2'-Dihydroxy-4'-methoxy-isoflavanolMetabolite
7,3',4'-TrihydroxyflavoneMetaboliteC00003825 (KNApSAcK)
7,3'-Dihydroxy-4'-methoxyflavoneMetaboliteC00013297 (KNApSAcK)
7,4'-Dihydroxy-3'-methoxyflavoneMetaboliteC00003826 (KNApSAcK)
7,4'-Dihydroxy-6-methoxyisoflavone, GlyciteinMetaboliteC00009392 (KNApSAcK)
7,4'-DihydroxyflavoneMetaboliteC00003800 (KNApSAcK)
7-Hydroxy-3',4'-dimethoxyflavoneMetaboliteC00013298 (KNApSAcK)
8C-Glucosyl-2,7,4'- trihydroxyisoflavanoneMetabolite
AcacetinMetaboliteC00003820 (KNApSAcK)
AfzelechinMetabolite2545-00-8 (CAS)
AfzelinMetaboliteC00005140 (KNApSAcK)
Apigenin 7,4'-dimethyl etherMetaboliteC00001016 (KNApSAcK)
Apigenin 7-rutinosideMetaboliteC00004156 (KNApSAcK)
ApigeninMetaboliteC00003817 (KNApSAcK)
AstragalinMetaboliteC00005138 (KNApSAcK)
Biochanin A 7-glucosideMetaboliteC00010112 (KNApSAcK)
Biochanin AMetaboliteC00002510 (KNApSAcK)
CatalystGeneProduct
CatalystPathwayR02442 (SWISS-MODEL)
CatalystPathwayR06556 (SWISS-MODEL)
CatalystPathwayR06793 (SWISS-MODEL)
CatalystPathwayR07317 (SWISS-MODEL)
CatalystGeneProduct
Cinnamtannin A1MetaboliteC00009107 (KNApSAcK)
CosmosiinMetaboliteC00001017 (KNApSAcK)
Cyanidin 3,5-di-O-glucosideMetaboliteC000002378 (KNApSAcK)
Cyanidin 3-(6''-(E)-p-coumarylsambubioside)-5-glucosideMetaboliteC00006836 (KNApSAcK)
Cyanidin 3-(6''-p-coumaryl-2'''-sinapylsambubioside)-5-(6-malonylglucoside)MetaboliteC00006838 (KNApSAcK)
Cyanidin 3-(6-p-coumaroylglucoside)-5-(6-malonylglucoside)MetaboliteC00006824 (KNApSAcK)
Cyanidin 3-(6-p-coumaroylglucoside)-5-glucosideMetaboliteC00006819 (KNApSAcK)
Cyanidin 3-(6-p-coumaroylglucoside)MetaboliteC00006800 (KNApSAcK)
Cyanidin 3-(6-p-coumaroylsambubioside)MetaboliteC00006802 (KNApSAcK)
Cyanidin 3-O-[2''-O-(2'''-O-(sinapoyl) xylosyl) 6''-O-(p-O-(glucosyl) p-coumaroyl) glucoside] 5-O-glucosideMetaboliteC00007661 (KNApSAcK)
Cyanidin 3-O-[2''-O-(2'''-O-(sinapoyl) xylosyl) 6''-O-(p-coumaroyl) glucoside] 5-O-glucosideMetaboliteC00007660 (KNApSAcK)
Cyanidin 3-O-[2''-O-(2'''-O-(sinapoyl) xylosyl) glucoside] 5-O-glucosideMetaboliteC00007656 (KNApSAcK)
Cyanidin 3-O-[2''-O-(xylosyl) 6''-O-(p-O-(glucosyl) p-coumaroyl) glucoside] 5-O-[6'''-O-(malonyl) glucoside]MetaboliteC00007659 (KNApSAcK)
Cyanidin 3-O-[2''-O-(xylosyl) glucoside] 5-O-(6'''-O-malonyl) glucosideMetaboliteC00007655 (KNApSAcK)
Cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-O-(glucosyl)-p-coumaroyl) glucoside] 5-O-glucosideMetaboliteC00007658 (KNApSAcK)
Cyanidin 3-O-[2''-O-(xylosyl)-6''-O-(p-coumaroyl) glucoside] 5-O-malonylglucosideMetaboliteC00007657 (KNApSAcK)
Cyanidin 3-O-[2-O-(2-O-(sinapoyl)-bata-D-xylopyranosyl) 6-O-(4-O-(beta-D-glucopyranosyl)-p-coumaroyl-bata-D-glucopyranoside] 5-O-[6-O-(malonyl) bata-D-glucopyranoside]MetaboliteC00007570 (KNApSAcK)
Cyanidin 3-glucosideMetaboliteC00002374 (KNApSAcK)
Cyanidin 3-sambubioside-5-glucosideMetaboliteC00006673 (KNApSAcK)
Cyanidin 3-sophorosideMetaboliteC00006658 (KNApSAcK)
CyanidinMetaboliteC00006614 (KNApSAcK)
Cyanidine 3-sambubiosideMetaboliteC00006657 (KNApSAcK)
DIHYDROKAEMPFEROL- 4-REDUCTASE-RXNDIHYDROKAEMPFEROL-4-REDUCTASE-RXN (HGNC)
Daidzein 7-glucosideMetaboliteC00002518 (KNApSAcK)
DaidzeinMetaboliteC00009380 (KNApSAcK)
DihydrokaempferolMetaboliteC00974 (KEGG Compound)
Diosmetin 7-glucosideMetaboliteC00004357 (KNApSAcK)
Diosmetin 7-neohesperidosideMetaboliteC00004508 (KNApSAcK)
Diosmetin 7-rutinosideMetaboliteC00004362 (KNApSAcK)
EpiafzelechinMetaboliteC00008805 (KNApSAcK)
Epicatechin-(4beta->8)5-epicatechinMetaboliteC00002918 (KNApSAcK)
EriodictyolMetaboliteC00000960 (KNApSAcK)
Formononetin 7-GlucosideMetaboliteC00002553 (KNApSAcK)
FormononetinMetaboliteC00002525 (KNApSAcK)
GenisteinMetaboliteC00002526 (KNApSAcK)
GenistinMetaboliteC00002528 (KNApSAcK)
GenkwaninMetaboliteC00001043 (KNApSAcK)
Hesperetin 7-glucosideMetaboliteC00008297 (KNApSAcK)
Hesperetin 7-neohesperidosideMetaboliteC00000987 (KNApSAcK)
HesperetinMetaboliteC00000968 (KNApSAcK)
HesperidinMetaboliteC00000970 (KNApSAcK)
Hirsutrin, Quercetin 3-GlucosideMetaboliteC00005373 (KNApSAcK)
HomoeriodictyolMetaboliteC00000969 (KNApSAcK)
IsoliquiritigeninMetaboliteC00006925 (KNApSAcK)
Isorhamnetin 3,7-dirhamnosideMetaboliteC00005559 (KNApSAcK)
Isorhamnetin 3-O-beta-D-glucopyranosideMetaboliteC00005525 (KNApSAcK)
Isorhamnetin 3-O-beta-glucopyranoside-7-O-alpha-rhamnopyranosideMetaboliteC00005557 (KNApSAcK)
Isorhamnetin 3-O-rutinosideMetaboliteC00005548 (KNApSAcK)
Isorhamnetin 3-alpha-L-arabinopyranoside-7-rhamnosideMetaboliteC00005551 (KNApSAcK)
Isorhamnetin 3-arabinosideMetaboliteC00005522 (KNApSAcK)
Isorhamnetin 3-neohesperidoside-7-rhamnosideMetabolite
Isorhamnetin 3-neohesperidosideMetaboliteC00005547 (KNApSAcK)
Isorhamnetin 3-rhamnoside-7-glucosideMetaboliteC00005558 (KNApSAcK)
Isorhamnetin 3-rhamnosideMetaboliteC00005526 (KNApSAcK)
IsorhamnetinMetaboliteC00004635 (KNApSAcK)
IsovitexinMetaboliteC00001059 (KNApSAcK)
Kaempferol 3,7-di-O-rhamnosideMetaboliteC00005189 (KNApSAcK)
Kaempferol 3,7-diglucosideMetaboliteC00005182 (KNApSAcK)
Kaempferol 3-O-rhamninosideMetaboliteC00005202 (KNApSAcK)
Kaempferol 3-O-rutinosideMetaboliteC00005169 (KNApSAcK)
Kaempferol 3-alpha-L-arabinofuranoside-7-rhamnosideMetaboliteC00005174 (KNApSAcK)
Kaempferol 3-arabinosideMetaboliteC00005132 (KNApSAcK)
Kaempferol 3-galactoside-7-rhamnosideMetaboliteC00005178 (KNApSAcK)
Kaempferol 3-galactosideMetaboliteC00005137 (KNApSAcK)
Kaempferol 3-gentiobiosideMetaboliteC00005166 (KNApSAcK)
Kaempferol 3-glucoside-(1->6)-glucoside-7-alpha-L-rhamnosideMetaboliteC00005234 (KNApSAcK)
Kaempferol 3-glucoside-7-rhamnosideMetaboliteC00005184 (KNApSAcK)
Kaempferol 3-neohesperidoside-7-rhamnosideMetaboliteC00005237 (KNApSAcK)
Kaempferol 3-neohesperidosideMetaboliteC00005167 (KNApSAcK)
Kaempferol 3-rhamnoside-7-glucosideMetaboliteC00005188 (KNApSAcK)
Kaempferol 3-robinoside (K 3-(6''-RhaGal))MetaboliteC00005160 (KNApSAcK)
Kaempferol 7-neohesperidosideMetaboliteC00005197 (KNApSAcK)
KaempferolMetaboliteC00004565 (KNApSAcK)
LEUCOPEL-RXNLEUCOPEL-RXN (HGNC)
LeucocyanidinMetabolite
LeucopelargonidinMetaboliteC00020638 (KNApSAcK)
LiquiritigeninMetaboliteC00000977 (KNApSAcK)
LiquiritinMetaboliteC00008193 (KNApSAcK)
Luteolin 3',7-diglucosideMetaboliteC00004290 (KNApSAcK)
Luteolin 4',7-diglucosideMetaboliteC00004294 (KNApSAcK)
Luteolin 4'-glucosideMetaboliteC00004276 (KNApSAcK)
Luteolin 5,7-diglucosideMetabolite
Luteolin 7-glucosideMetaboliteC00004266 (KNApSAcK)
LuteolinMetaboliteC00000674 (KNApSAcK)
MedicarpinMetaboliteC00002547 (KNApSAcK)
NARINGENIN-3- DIOXYGENASE-RXNNARINGENIN-3-DIOXYGENASE-RXN (HGNC)
Naringenin 4'- O-glucosideMetabolite81202-36-0 (CAS)
Naringenin chalconeMetaboliteundefined (undefined)
NaringeninMetaboliteC00000982 (KNApSAcK)
NaringinMetaboliteC00000983 (KNApSAcK)
PelargonidinMetaboliteC00007232 (KNApSAcK)
PopulninMetaboliteC00005149 (KNApSAcK)
Procyanidin B2MetaboliteC00009077 (KNApSAcK)
Procyanidin C1MetaboliteC00009098 (KNApSAcK)
ProductScutellarein 7-glucuronideMetabolite
PrunetinMetaboliteC00002564 (KNApSAcK)
PruninMetaboliteC00000998 (KNApSAcK)
PuerarinMetaboliteC00006094 (KNApSAcK)
Quercetin 3,7-diglucosideMetaboliteC00005427 (KNApSAcK)
Quercetin 3,7-dirhamnosideMetaboliteC00005432 (KNApSAcK)
Quercetin 3-Arabinoside-7-rhamnosideMetaboliteC00005420 (KNApSAcK)
Quercetin 3-O-L-rhamnosideMetaboliteC00005374 (KNApSAcK)
Quercetin 3-O-alpha-L-arabinopyranosideMetaboliteC00005368 (KNApSAcK)
Quercetin 3-O-glucoside-7-O-rhamnosideMetaboliteC00005428 (KNApSAcK)
Quercetin 3-neohesperidoside-7-rhamnosideMetaboliteC00005470 (KNApSAcK)
Quercetin 3-neohesperidosideMetaboliteC00005412 (KNApSAcK)
Quercetin 3-rhamnoside-7-glucosideMetaboliteC00005431 (KNApSAcK)
Quercetin 3-rutinoside-7-rhamnosideMetaboliteC00005473 (KNApSAcK)
Quercetin 7-glucosideMetaboliteC00005382 (KNApSAcK)
QuercetinMetaboliteC00004631 (KNApSAcK)
RXN-1481RXN-1481 (STRING)
RXN-1484RXN-1484 (STRING)
RXN-525RXN-525 (HGNC)
RXN-527RXN-527 (HGNC)
RXN-7652RXN-7652 (STRING)
RXN-7775RXN-7775 (STRING)
RXN-9724RXN-9724 (STRING)
Rutin,BirutanMetaboliteC00005413 (KNApSAcK)
SaponarinMetaboliteC00006224 (KNApSAcK)
ScutellareinMetaboliteC00003834 (KNApSAcK)
TilirosideMetaboliteC00005851 (KNApSAcK)
VestitoneMetaboliteC00002584 (KNApSAcK)
[Epicatechin-(4beta->8)]4-epicatechinMetaboliteC00009109 (KNApSAcK)
catechinMetaboliteC06562 (KEGG Compound)
dihydroquercetin, TaxifolinMetaboliteC01617 (KEGG Compound)
epicatechin heptamerMetabolite
p-Coumaroyl-CoAMetaboliteundefined (undefined)

Annotated Interactions

SourceTargetTypeDatabase referenceComment
6C-Glucosyl-2- hydroxynaringeninIsovitexinArrowRXN-14076 (BioCyc)
NaringeninNaringenin 4'- O-glucosideArrowR08006 (KEGG Reaction)
Retrieved from "https://classic.wikipathways.org/index.php/Pathway:WP3620"
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