Download Pathways

From WikiPathways

(Difference between revisions)
Jump to: navigation, search
(Removed link to *all* pathway content, which included test, temp and incomplete pathways)
Line 105: Line 105:
* [http://data.wikipathways.org Prior monthly releases]
* [http://data.wikipathways.org Prior monthly releases]
* [[Daily_Download|Daily curated releases]]
* [[Daily_Download|Daily curated releases]]
-
* [[:Download_All_Pathways | Daily release of all pathways]] (warning: includes non-curated content!)
 
* [http://www.wikipathways.org//wpi/batchDownload.php?species=Homo%20sapiens&fileType=gpml&tag=Curation:Reactome_Approved  Reactome Human Collection]
* [http://www.wikipathways.org//wpi/batchDownload.php?species=Homo%20sapiens&fileType=gpml&tag=Curation:Reactome_Approved  Reactome Human Collection]
* [http://data.wikipathways.org/current/gmt Gene lists per pathway (GMT)]
* [http://data.wikipathways.org/current/gmt Gene lists per pathway (GMT)]
Line 111: Line 110:
* [http://data.wikipathways.org/current/rdf Linked data files (RDF)]
* [http://data.wikipathways.org/current/rdf Linked data files (RDF)]
* [http://data.wikipathways.org/current/index Database index files (index)]
* [http://data.wikipathways.org/current/index Database index files (index)]
 +
</font>
</font>

Revision as of 20:40, 19 October 2016

Versioned Releases

Each month we release an updated set of pathways in various data and image formats. These pathways have been reviewed and tagged as curated, and are considered ready for analysis and data overlays.


Current version: 20161010 (10 October 2016)


Vertebrates

Bos taurus Canis familiaris Danio rerio Equus caballus Gallus gallus Homo sapiens Mus musculus
Pan troglodytes Rattus norvegicus Sus scrofa

Invertebrates

Anopheles gambiae Caenorhabditis elegans Drosophila melanogaster

Plants

Arabidopsis thaliana Hordeum vulgare Oryza sativa Populus trichocarpa Solanum lycopersicum Zea mays


Eukaryotic microorganisms

Gibberella zeae Saccharomyces cerevisiae Plasmodium falciparum

Bacteria

Bacillus subtilis E.coli Mycobacterium tuberculosis

Other Collections

Retrieved from "https://classic.wikipathways.org/index.php/Download_Pathways"
Personal tools