Omega-6-fatty acids in senescence (Homo sapiens)

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127124123192, 12419, 14439, 742918, 11191341777, 104, 1093441057311, 33, 14155, 138, 1447777, 104, 109PDietary LipidsDH-PGE2Non-enzymatic dehydration7S,8-epoxy-17S-HDHACarbonyl reductase*8-iso-13,14-dihydro-15-keto-PGE2*15-keto-PGI219-hydroxy-RvE16-keto-PGF1aArachidonic Acid (20:4,w6)17R-HpDHA20-carboxy-RvE1*RvE419-OH-PGH2*18R-HpEPEPGD1PGF1aAdrenic acid (22:4,w6)PTGS215-keto-13,14-dihydro-PGE1IP3L-PGDSEnzymatic β and w oxidation*E2-IsoKΔ9-Elongase*PGDS10,11,dihydro-12-oxo-RvE1GPR32DH-PGH2*4S,5-epoxy-17R-HDHAHPGD 9alpha,11alpha-PGF2a5S,12S,18R-TriHEPE*RvD413,14-dihydro-15-keto-PGE2Unknown5S,6R,18R-TriHEPE*4S-hydroperoxy-17S-HDHA15-deoxy-Δ12,14-PGJ2Senescence phenotypeReduction*15-ketoprostaglandin reductasePGC111-dehydro-Thromboxane B2β-oxidation*RASNon-enzymatic dehydrationRvD5PGG117S-HpDPAEETsCa2+ALOX59-deoxy-Δ12-PGD2*6-keto-PGE1PGJ25S,12R,18R-TriHEPE*7S-hydroperoxy-17S-HDHAOsbond acid (22:5,w6)ABCC4DH-PGF1a*HETEs9-hydroxyprostaglandin dehydrogenase*GqRvD6Excretion7S,8-epoxy-17R-HDHADihomo-y-linolenic acid (DGLA) (20:3,w6)PGA Isomerase15-hydroxy PG dehydrogenase*prostaglandin Δreductase*β-oxidase*ALOX15Bβ-oxidationAKR1B1PTGDR5S,6S-epoxy-18S-HEPEALOX5PGESPGI1*Hydrolysis*AT-RvD411-deoxy-13,14-dihydro-15-keto-11,16-cyclo-PGE2*Cell Cycle ArrestSenescenceDH-PGF2aALOX15Dihomo-15d-PGJ2p53DH-TxA2*Non-enzymatic degradation15-keto-PGD2Non-enzymaticAlbumin-mediated degradationRvD5(n-3 DPA)*RvE2Spontaneous hydrolysis18S-RvE1Hydrolysis (Unknown Hydrolase)MAPK cascade15-keto-PGF2aTxA1*DH-15d-Δ12,14-PGD2Non-enzymatic,albumin-mediated degradation15S-HEPELGE2Dinor-4-keto-7,9,13-trihydroxy-prosta-11,12-enoic acid*Ca2+5S,6S-epoxy-18R-HEPE18-oxo-RvE19α, 11β-dihydroxy-15-oxo-2,3,18,19-tetranorprost-5-ene-1,20-dioic acid*5-series leukotrienes2,3 dinor-6-keto-PGF1a*TxAPGI2Δ13-reductasePG-9KRPeroxidase*Prostaglandin [e]18S-HpEPE*UnknownExcretion via urine5S-hydroxyperoxy-18R-HEPEAKR1C3UnknownDehydration*PGB14S,5-epoxy-17S-hydroxy-HDHAALOX5Non-enzymatic hydrolysisMitochondrial dysfunction-associated senescenceOncogene (RAS)-induced senescenceExcretion via urineRadiation-induced senescenceUnknownLTA4HRvD2(n-3 DPA)*PGA111a-hydroxy-9,15-dioxo-2,3,4,5,20-pentanor-19-carboxyprostanoic acidPGD2Eicosadienoic acid (20:2,w6)LGD2PGH1ALOX5PGE 19-hydroxylasePTGER1Free radical-catalyzed peroxidationPGH2Δ6-trans-12-epi-leukotriene B4FPR2 AKR1C315-keto-8-iso-PGF2aIP37S,8R-epoxy-17S-HDPA*PGFSLinoleic acid (LA) (18:2,w6)9,15-dideoxy-Δ9,12,14-PGD2*RvE1ALOX1517R-HDHAelongationdelta6 desaturationbeta-oxidation12-oxo-RvE115-keto-13,14-dihydro-PGF2a15S-hydroxy-5S-HpEPE*Beta-oxidationALOX15PRAK/MAPKAPK5Enzymatic Epoxidation5(S)-HETEPGA2Docosahexaenoic acid (DHA) (22:6,w3)Reduction2,3-dinor-5,6-dihydro-8-IsoPGF2ap53S3713,14-dihydro-PGF2acAMPHydrolase*H-PGDSDH-PGD2*11,15-dioxo-9α-hydroxy-, 2,3,4,5-tetranorprostan-1,20-dioic acid*LTA4H20-hydroxy-RvE1CYP4F8G2-IsoPTBXAS1TxB115-keto-PGE118S-RvE217S-HpDHADehydraseReduction15-keto-13,14-dihydro-PGE1UnknownH2-IsoPUnknownDehydrationGqAT-RvD34,13-diketo-7,9-dihydroxy-2,3-dinor prostanoic acid*PGE 19-hydroxylasePeroxidase*β and ω oxidation*PGG2PPARγDocosapentaenoic acid (DPA) (22:5,w3)Δ12-PGJ26-trans-LTB4Isoprostanesw-hydroxylase*RvE3DH-PGJ213,14-dihydro-PGE2*7S,17S-diHpDPAGi9alpha,11beta-PGF2P45010,11-dihydro-RvE1Isoprostanes13,14-dihydro-15-keto-PGA25α,7α-dihydroxy-11-keto tetranor-prostane-1,16-dioic acid*PGDSDH-TxB*TXASALOX519-OH-PGE1PTGES15S-HpEPEPGESUnknownElongasey-linolenic acid (GLA) (18:3,w6)CMKLR113,14-dihydro-15-keto-PGD2 PGC IsomerasePGE117S-HDHAPGE22,3-dinor-8-IsoPGF2aΔ12-PGD215R-HpEPE5S-hydroxyperoxy-18S-HEPESLCO2A1RvD3CYP8A19a, 11a-dihydroxy-11-keto-2,3,4,5-tetranorprostane-1,16-dioic acid*GsEnzymatic dehydrogenationPeroxidasePTGS28-iso-PGF2aHydrolase*5S,6S,18R-TriHEPE*4051, 833283721135439, 7432716, 41, 59, 86, 121404040, 1436, 40, 91, 100, 114...40, 81, 91, 100, 121...6, 91, 100, 1217, 367, 8, 12, 13, 35...41, 71, 89, 1017, 16, 23, 60, 89...PTGES2PTGES3AKR1B123, 53, 101, 13523, 101, 13547, 54, 126PTGDR2 8319-OH-PGE215-keto-PGE2PTGER239, 74PTGER339, 74PTGER439, 74PGC2PGB2PTGFR TxBTBXA2RGsPTGIRcAMPMembrane phospholipids20116Cytosolic phospholipase A2Cytosolic phospholipase A2p38 MAPKNon-enzymatic dehydration11-hydroxy-9,15-dioxo-prost-5-en-1,20-dioic acid*7α-hydroxy-5,11-diketo-tetranorprosta-1,16-dioc acid*4099β-oxidase*54Dinor-4,13-diketo-7,9-dihydroxy-prostanoic acid*Dinor-4,13-diketo-7,9-dihydroxy-prostan-1,18-dioic acid*Unknown2,3-dinor 6-keto pentanor*19-OH-6-keto-PGF1aβ-oxidation*6,15-Diketo-13,14-dihydro-PGF1a*6,15-Diketo-13,14-dihydro-2,3-dinor PGF1a*β-oxidation*Unknown2,3-dinor-11β-PGF2*83UnknownUnknown25, 115, 12049, 12012012025, 49, 12012022, 31, 12022, 31, 58, 120, 14152, 63, 120, 1402,3-Dinor-Thromboxane B211-OH-dehydrogenaseUnknownUnknownUnknownUnknownPPTGS1PTGS233, 14166, 76, 13215, 33, 14122, 122PGH3ELOVL5TXASPGDSPGI3Eicosatetraenoic acid (ETA) (20:4,w3)PGE3PGF3aPGD3PGESProstaglandin F synthaseStearidonic acid (SDA) (18:4,w3)Phospholipase (cPLA2α)PGISTxA3a-Linolenic acid (ALA) (18:3,w3)Eicosapentaenoic acid (EPA) (20:5,w3)PGG3Eicosatrienoic acid (20:3,w3)FADS2FADS1Dietary Lipids66, 76, 13249, 66, 7649, 66, 7649, 66, 7666, 7649, 66, 7622, 33, 122, 14122, 33, 122, 14122, 33, 122, 14115-deoxy-Δ12,14-PGD2PTGS1PTGS2FADS2Δ9-Elongase*ELOVL213213226, 13226262626, 862626262626, 132262626FADS2ELOVL5FADS2FADS1ELOVL515-keto-13,14-dihydro-8-iso-PGF2aalpha-tetranor-15-keto-13,14-dihydro-8-iso-PGF2a*β-oxidationExcretion via urineExcretionExcretion via urineExcretion via urineΔ13-reductaseUnknownΔ13-reductaseΔ13-reductase15-PGDHExcretion via urine6,15-diketo PGF1aUnknownD2-IsoPJ2-IsoPE2-IsoPA2-IsoPD2-IsoK43, 80, 12380, 9534, 116116DPEP1GGT1DPEP2LTC4SGGT5LTA4H61, 80, 93, 9543, 80, 9514543, 80, 9512334, 43, 80, 95145145145145ALOX5LTB45-HPETELTD4LTA4LTE4LTC4SASPFLAPHPGD HPGD HPGD Prostaglandin [c]Prostaglandin [e]Prostaglandin [c]Prostaglandin [e]Prostaglandin [c]DH-PGI2Non-enzymatic123102, 123102, 118, 123102, 12311810234, 116, 123Oncogene (RAS)-induced senescenceMitochondrial dysfunction-associated senescenceIrradiation-induced senescene137CysLT1R118SIRT1118p53ROSp53Pp21RbRbP102, 12334, 116LipoxinsEoxinsProtectinsResolvinsMaresinsALOX12ALOX15Oncogene-induced senescenceDNA damage-induced senescencePAI-178, 118Senescence78, 118Paracrine senescence137p53Ac10220-OH-LTB4Oncogene-induced senescenceDNA damage-induced senescenceOxidative stress-induced senescenceReplicative senescenceIrradiation-induced senescenceReplicative senescenceRadiation-induced senescenceMtochondrial dysfunction-associated senescenceOncogene-induced senescenceSASPIsofuranesIrradiation-induced senescence137DH-PGG2*Irradiation-induced SenescenceIrradiation-induced SenescenceIrradiation-induced SenescenceOncogene-induced senescence (RAS)343434Irradiation-induced Senescence343434Radiation-induced senescenceOncogene(RAS)-induced senescence3414s-HpDHA13S,14S-epoxy-maresinMaresin 1Maresin 2MCTR1MCTR2MCTR3LGR6 receptorRORalphaSEHALOX15ALOX12epoxide hydrolysisGSTM4s/LTC4sGGTDPEP1Radiation-induced senescenceRadiation-induced senescenceOncogene (RAS)-induced Senescence3434Mitochondrial dysfunction-associated senescenceOncogene (RAS)-induced senescence34Mitochondrial dysfunction-associated senescenceOncogene (RAS)-induced senescenceMitochondrial dysfunction-associated senescenceOncogene(RAS)-induced senescence3413734Oncogene (RAS)-induced senescence13734Replicative senescence13734Mitochondrial dysfunction-associated senescenceOncogene(RAS)-induced senescenceIrradiation-induced senescence3413734, 116Oncogene(RAS)-induced senescence34343414, 38, 11714, 38, 11714, 38, 11714, 38, 11714, 38, 11714, 38, 11714, 38, 117PeroxidasePTGS2RvD1(n-3 DPA)*2, 50, 77, 104, 1095, 1082, 50, 1045, 1085, 1082, 50, 77, 104, 1095, 1082, 50, 104HPGD17-oxo-RvD1RvD2AT-RvD28-oxo-RvD1RvD1AT-RvD116-oxo-RvD27-oxo-RvD285858585858585RvT2UnknownRvT4PTGS27,8-epoxy-13R-HDPA*7-hydroperoxy-13R-HpDPA*13R-HpDPA*RvT3UnknownRvT1ELOVL2FADS2ALOX15Hydrolase*ALOX516S,17S-epoxyprotectins10S,17S-dihydroxy-DHA15Δ-trans PD110epi-S15Δ-trans PD116R/S,17S-dihydroxy-DHA10R/S,17S-dihydroxy-DHA10S,17S-11E,13Z,15E-diHpDHAPDXProtectin D1Protectin D22, 42421072, 424242GPx-442h15-LOX1ALOX15ALOX5Non-enzymatic HydrolysisNon-enzymatic HydrolysisEnzymatic HydrolysisLipoxins


Description

Oxylipins, notably prostaglandins, are synthetized by senescent cells and then accumulate, promoting the senescent-associated secretory phenotype (Wiley et al., 2021). The prostaglandins are classified into three main groups, depending on the starting point of their biosynthesis. The serie-1-prostaglandins are derived from its precursor dihomo-γ-linolenic acid (DGLA). The serie-2-prostaglandins and serie-3-prostaglandins are derived from arachidonic acid (AA) and eicosapentae-noic acid (EPA), respectively (Noverr et al., 2003)

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History

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CompareRevisionActionTimeUserComment
129383view18:52, 29 March 2024Nikita KrstevskaAddition of missing Ensembl identifiers
129101view14:29, 11 March 2024Nikita KrstevskaAddition of isoforms NAT1 and NAT2 in LTE4 -> N-acetyl LTE4 reaction
128985view14:11, 27 February 2024Nikita KrstevskaUpdating a comment on the LTB4 -> 20-OXO-LTB4 reaction.
128703view22:00, 20 February 2024EgonwCorrected the EC format
128691view20:08, 19 February 2024EgonwRemoved redundant RHEA: prefixes in 27 interaction identifiers
128662view16:10, 18 February 2024Nikita KrstevskaModification of text labels of the gene products 'PGA isomerase' and 'PGC isomerase'
128639view17:52, 17 February 2024Nikita KrstevskaAddition of missing gene product identifiers
128612view12:30, 16 February 2024Nikita KrstevskaAddition of missing gene IDs
128601view19:39, 15 February 2024Nikita KrstevskaAddition of missing gene product annotations
128579view11:07, 14 February 2024Nikita KrstevskaModification of glutathione cofactor
128559view18:33, 12 February 2024Nikita KrstevskaAnnotation of missing gene product IDs
128502view13:49, 10 February 2024Nikita KrstevskaPositive feedback loop of dihomo-15d-PGJ2
128091view16:57, 25 January 2024JuliaUMRHEA IDs for PGs
128089view13:47, 25 January 2024DeSlOntology Term : 'fatty acid omega degradation pathway' added !
128087view13:45, 25 January 2024DeSlOntology Term : 'lipid metabolic pathway' added !
127870view13:10, 3 January 2024AndreapascaudModified title
127831view12:52, 22 December 2023JuliaUMCorrection of reaction + IDs
127820view12:44, 19 December 2023JuliaUMHX and TRX were added
127803view14:02, 16 December 2023EgonwCorrected the format of a few EC identifiers
127802view13:58, 16 December 2023EgonwMade multiple pathways clickable
127800view13:46, 16 December 2023EgonwIP3 is not a complex itself
127793view15:14, 14 December 2023JuliaUMNew reaction + IDs
127792view18:00, 13 December 2023JuliaUMNew LX and LT reactions
127791view13:02, 13 December 2023JuliaUMNew LT reactions + new IDs
127789view16:56, 12 December 2023JuliaUMFinish of the map splitting + rearrangement + eoxins were added
127778view15:51, 6 December 2023JuliaUMsmall changes in reactions
127777view09:08, 6 December 2023JuliaUMSmall changes in PG reaction
127703view17:23, 23 November 2023JuliaUMNew references + minor corrections in the LT pathway
127702view08:36, 23 November 2023JuliaUMSmall changes in the reactions
127677view17:29, 20 November 2023JuliaUMNew IDs + minimized duplicated nodes
127676view12:36, 20 November 2023JuliaUMAddition of a legend
127670view15:11, 16 November 2023JuliaUMNew Maresins & protectins (DPA)
127669view13:05, 16 November 2023JuliaUMDeletion/Addition of PG reactions + references
127668view12:27, 16 November 2023Mra1221Modified title
127663view08:47, 15 November 2023JuliaUMMore references for isoprostanes + change to hypothetical reaction in comments
127656view07:58, 14 November 2023JuliaUMNew IDs + references for Isoprostanes
127632view14:46, 10 November 2023JuliaUMNew Isoprostanes + IDs
127631view09:47, 10 November 2023JuliaUMNew Isoprostanes + IDs
127627view17:11, 9 November 2023JuliaUMMore consistency in senescence links + isoprostanes
127626view13:58, 9 November 2023JuliaUMMore consistency in senescence links
127615view19:25, 7 November 2023JuliaUMNew IDs + some changes in resolvin T
127604view08:23, 7 November 2023JuliaUMOntology Term : 'cellular senescence pathway' added !
127591view07:17, 29 October 2023EgonwNot a mim-conversion
127589view08:52, 27 October 2023AndreapascaudAddition of CHEBI IDs to the metabolites
127588view17:55, 26 October 2023JuliaUMSmall changes on DH-PG reactions + new IDs for enzymes
127587view11:40, 26 October 2023EgonwFixed a few EC numbers (syntax)
127584view10:09, 25 October 2023AndreapascaudUpdate Protectins
127583view09:49, 25 October 2023AndreapascaudUpdate
127579view10:32, 24 October 2023JuliaUMNew IDs for resolvin d
127578view10:12, 24 October 2023JuliaUMNew IDs for resolvins

External references

DataNodes

View all...
NameTypeDatabase referenceComment
10,11,dihydro-12-oxo-RvE1MetaboliteCHEBI:165276 (ChEBI)
10,11-dihydro-RvE1MetaboliteCHEBI:165277 (ChEBI)
10R/S,17S-dihydroxy-DHAMetabolite
10S,17S-11E,13Z,15E-diHpDHAMetabolite
10S,17S-dihydroxy-DHAMetabolite
10epi-S15Δ-trans PD1Metabolite
11,15-dioxo-9α-hydroxy-, 2,3,4,5-tetranorprostan-1,20-dioic acid*Metabolite
11-OH-dehydrogenaseGeneProduct1.2.1.3 (Enzyme Nomenclature)
11-dehydro-Thromboxane B2MetaboliteCHEBI:28667 (ChEBI)
11-deoxy-13,14-dihydro-15-keto-11,16-cyclo-PGE2*Metabolite
11-hydroxy-9,15-dioxo-prost-5-en-1,20-dioic acid*Metabolite
11a-hydroxy-9,15-dioxo-2,3,4,5,20-pentanor-19-carboxyprostanoic acidMetaboliteCHEBI:73965 (ChEBI)
12-oxo-RvE1MetaboliteCHEBI:165264 (ChEBI)
13,14-dihydro-15-keto-PGA2MetaboliteCHEBI:89315 (ChEBI) 8: Prostanoid Metabolites as Biomarkers in Human Disease Helena Idborg; Sven-Christian Pawelzik. 2022. PubMed 36005592.
13,14-dihydro-15-keto-PGD2 MetaboliteCHEBI:72603 (ChEBI) DK-PGD2
13,14-dihydro-15-keto-PGE2MetaboliteCHEBI:15550 (ChEBI) PGEM= Metabolites downstream of PGE2
13,14-dihydro-PGE2*Metabolite
13,14-dihydro-PGF2aMetabolite88346 (ChEBI)
13R-HpDPA*Metabolite
13S,14S-epoxy-maresinMetaboliteCHEBI:131958 (ChEBI) (13R)-S-glutathionyl-(14S)-hydroxy-(4Z,7Z,9E,11E,16Z,19Z)-docosahexaenoic acid
14s-HpDHAMetaboliteCHEBI:136526 (ChEBI)
15-PGDHGeneProduct1.1.1.141 (Enzyme Nomenclature) 15-PGDH=15-hydroxy-prostaglandin dehydrogenase
15-deoxy-Δ12,14-PGD2MetaboliteCHEBI:63999 (ChEBI) =15d-PGJ2
15-deoxy-Δ12,14-PGJ2Metabolite34159 (ChEBI) =15d-PGJ2
15-hydroxy PG dehydrogenase*

prostaglandin Δreductase*

β-oxidase*		GeneProductLumped reaction
15-keto-13,14-dihydro-8-iso-PGF2aMetabolite191919-02-5 (CAS)
15-keto-13,14-dihydro-PGE1Metabolite134499 (ChEBI)
15-keto-13,14-dihydro-PGE1MetaboliteCHEBI:134499 (ChEBI)
15-keto-13,14-dihydro-PGF2aMetabolite63976 (ChEBI)
15-keto-8-iso-PGF2aMetabolite191919-01-4 (CAS)
15-keto-PGD2MetaboliteCHEBI:15557 (ChEBI)
15-keto-PGE1Metabolite22973-19-9 (CAS)
15-keto-PGE2Metabolite15547 (ChEBI)
15-keto-PGF2aMetaboliteCHEBI:28442 (ChEBI)
15-keto-PGI2MetaboliteCHEBI:15556 (ChEBI) =15-dehydro-Prostaglandin I2
15-ketoprostaglandin reductaseGeneProduct1.3.1.48 (Enzyme Nomenclature)
15R-HpEPEPathwayvia acetalyted cox2
15S-HEPEMetaboliteCHEBI:88347 (ChEBI)
15S-HpEPEMetaboliteCHEBI:165266 (ChEBI)
15S-hydroxy-5S-HpEPE*Metabolite
15Δ-trans PD1Metabolite
16-oxo-RvD2MetaboliteCHEBI:138281 (ChEBI)
16R/S,17S-dihydroxy-DHAMetabolite
16S,17S-epoxyprotectinsMetabolite
17-oxo-RvD1MetaboliteCHEBI:132800 (ChEBI)
17R-HDHAMetaboliteCHEBI:91137 (ChEBI)
17R-HpDHAMetaboliteCHEBI:138590 (ChEBI)
17S-HDHAMetaboliteCHEBI:138640 (ChEBI)
17S-HpDHAMetaboliteCHEBI:136113 (ChEBI)
17S-HpDPAMetaboliteCHEBI:136118 (ChEBI)
18-oxo-RvE1MetaboliteCHEBI:131617 (ChEBI)
18R-HpEPEMetaboliteCHEBI:138565 (ChEBI)
18S-HpEPE*Metabolite
18S-RvE1MetaboliteCHEBI:137038 (ChEBI)
18S-RvE2MetaboliteCHEBI:137034 (ChEBI)
19-OH-6-keto-PGF1aMetabolite172589 (ChEBI)
19-OH-PGE1Metabolite55123-67-6 (CAS)
19-OH-PGE2MetaboliteCHEBI:165313 (ChEBI)
19-OH-PGH2*Metabolite
19-hydroxy-RvE1MetaboliteCHEBI:165268 (ChEBI)
2,3 dinor-6-keto-PGF1a*Metabolite73944 (ChEBI)
2,3-Dinor-Thromboxane B2MetaboliteCHEBI:89991 (ChEBI)
2,3-dinor 6-keto pentanor*Metabolite
2,3-dinor-11β-PGF2*MetaboliteCHEBI:165323 (ChEBI)
2,3-dinor-5,6-dihydro-8-IsoPGF2aMetabolite
2,3-dinor-8-IsoPGF2aMetabolite
20-OH-LTB4MetaboliteCHEBI:15646 (ChEBI)
20-carboxy-RvE1*Metabolite
20-hydroxy-RvE1MetaboliteCHEBI:165269 (ChEBI)
4,13-diketo-7,9-dihydroxy-2,3-dinor prostanoic acid*Metabolite4,13-diketo-7,9-dihydroxy-2,3-dinor prostanoic acid =dinor-6,15-diketo-9,11-dihydroxy prostanoic acid
4S,5-epoxy-17R-HDHAMetaboliteCHEBI:187528 (ChEBI)
4S,5-epoxy-17S-hydroxy-HDHAMetaboliteCHEBI:138647 (ChEBI)
4S-hydroperoxy-17S-HDHAMetaboliteCHEBI:138641 (ChEBI)
5(S)-HETEMetaboliteCHEBI:28209 (ChEBI)
5-HPETEMetaboliteHMDB11135 (HMDB)
5-series leukotrienesPathway
5S,12R,18R-TriHEPE*Metabolite
5S,12S,18R-TriHEPE*Metabolite
5S,6R,18R-TriHEPE*Metabolite
5S,6S,18R-TriHEPE*Metabolite
5S,6S-epoxy-18R-HEPEMetaboliteCHEBI:132219 (ChEBI)
5S,6S-epoxy-18S-HEPEMetaboliteCHEBI:138490 (ChEBI)
5S-hydroxyperoxy-18R-HEPEMetaboliteCHEBI:81562 (ChEBI)
5S-hydroxyperoxy-18S-HEPEMetaboliteCHEBI:91287 (ChEBI)
5α,7α-dihydroxy-11-keto tetranor-prostane-1,16-dioic acid*Metabolite
6,15-Diketo-13,14-dihydro-2,3-dinor PGF1a*Metabolite6,15-Diketo-13,14-dihydro-2,3-dinor PGF1a = 15 kd dinor
6,15-Diketo-13,14-dihydro-PGF1a*MetaboliteCHEBI:72595 (ChEBI)
6,15-diketo PGF1aMetabolite
6-keto-PGE1Metabolite28269 (ChEBI)
6-keto-PGF1aMetabolite28158 (ChEBI)
6-trans-LTB4MetaboliteCHEBI:63981 (ChEBI)
7,8-epoxy-13R-HDPA*Metabolite
7-hydroperoxy-13R-HpDPA*Metabolite
7-oxo-RvD2MetaboliteCHEBI:138279 (ChEBI)
7S,17S-diHpDPAMetaboliteCHEBI:140248 (ChEBI)
7S,8-epoxy-17R-HDHAMetaboliteCHEBI:138613 (ChEBI)
7S,8-epoxy-17S-HDHAMetabolite53477500 (PubChem-compound)
7S,8R-epoxy-17S-HDPA*Metabolite
7S-hydroperoxy-17S-HDHAMetaboliteCHEBI:140245 (ChEBI)
7α-hydroxy-5,11-diketo-tetranorprosta-1,16-dioc acid*Metabolite
8-iso-13,14-dihydro-15-keto-PGE2*Metabolite
8-iso-PGF2aMetaboliteCHEBI:34505 (ChEBI) 8-Isoprostane=8-epi-Prostaglandin F2alpha
8-oxo-RvD1MetaboliteCHEBI:132797 (ChEBI)
9,15-dideoxy-Δ9,12,14-PGD2*Metabolite
9-deoxy-Δ12-PGD2*Metabolite175297 (ChEBI)
9-hydroxyprostaglandin dehydrogenase*GeneProduct
9a, 11a-dihydroxy-11-keto-2,3,4,5-tetranorprostane-1,16-dioic acid*Metabolite
9alpha,11alpha-PGF2aMetaboliteCHEBI:15553 (ChEBI)
9alpha,11beta-PGF2Metabolite15553 (ChEBI)
9α, 11β-dihydroxy-15-oxo-2,3,18,19-tetranorprost-5-ene-1,20-dioic acid*Metabolite
A2-IsoPMetaboliteIso-Prostaglandin A2
ABCC4GeneProductENSG00000125257 (Ensembl)
AKR1B1GeneProductENSG00000085662 (Ensembl) =aldo-keto reductase family 1 member B
AKR1C3GeneProductENSG00000196139 (Ensembl) =NADPH-dependent PGD2 11-ketoreductase

=aldo-keto reductase family 1 member C3

=EC 1.1.1.188
ALOX12 GeneProductENSG00000108839 (Ensembl) Enzyme 12LOX
ALOX12GeneProductENSG00000108839 (Ensembl)
ALOX15 GeneProductENSG00000161905 (Ensembl) Enzyme:LOX15
ALOX15BGeneProductENSG00000179593 (Ensembl) =15-LOX-2 =arachidonate 15-lipoxygenase type B
ALOX15GeneProductENSG00000161905 (Ensembl)
ALOX5GeneProductENSG00000012779 (Ensembl)
AT-RvD1MetaboliteCHEBI:138179 (ChEBI)
AT-RvD2 MetaboliteCHEBI:138614 (ChEBI)
AT-RvD3MetaboliteCHEBI:138615 (ChEBI)
AT-RvD4MetaboliteCHEBI:138616 (ChEBI)
Adrenic acid (22:4,w6)Metabolite53487 (ChEBI)
Albumin-mediated degradationComplex
Arachidonic Acid (20:4,w6)Metabolite15843 (ChEBI)
Beta-oxidation
CMKLR1ComplexENSG00000174600 (Ensembl) =ChemR23
CYP4F8GeneProductENSG00000186526 (Ensembl) =cytochrome P450 family 4 subfamily F member 8
CYP8A1GeneProductENSG00000124212 (Ensembl) =prostaglandin I2 synthase =PTGIS
Ca2+MetaboliteCHEBI:29108 (ChEBI) calcium
Carbonyl reductase*GeneProduct
Cell Cycle Arrest SenescencePathway
CysLT1RProteinENSG00000173198 (Ensembl) =cysteinyl leukotriene type 1 receptor
Cytosolic phospholipase A2ProteinP47712 (Uniprot-TrEMBL)
D2-IsoKMetaboliteD2-Isoketals
D2-IsoPMetaboliteIso-Prostaglandin D2
DH-15d-Δ12,14-PGD2MetaboliteCHEBI:165317 (ChEBI)
DH-PGD2*Metabolite
DH-PGE2MetaboliteCHEBI:185711 (ChEBI)
DH-PGF1a*Metabolite
DH-PGF2aMetaboliteCHEBI:183014 (ChEBI)
DH-PGG2*Metabolite
DH-PGH2*Metabolite
DH-PGI2MetaboliteCHEBI:165328 (ChEBI)
DH-PGJ2MetaboliteCHEBI:165318 (ChEBI)
DH-TxA2*Metabolite
DH-TxB*Metabolite
DPEP1 GeneProductENSG00000015413 (Ensembl) dipeptidase 1
DPEP1GeneProductENSG00000015413 (Ensembl) =Human microsomal dipeptidase (MDP, formerly referred to as dehydropeptidase-I or renal dipeptidase) [EC 3.4.13.11]
DPEP2GeneProductENSG00000167261 (Ensembl)
DehydraseGeneProduct
Dehydration
Dehydration*
Dihomo-15d-PGJ2Metabolite16061095 (PubChem-compound) =1a,1b-dihomo-15-deoxy-Δ12,14-prostaglandin J2
Dihomo-y-linolenic acid (DGLA) (20:3,w6)MetaboliteCHEBI:53486 (ChEBI) = 8,11,14-Eicosatrienoic acid =DGLA
Dinor-4,13-diketo-7,9-dihydroxy-prostan-1,18-dioic acid*Metabolite
Dinor-4,13-diketo-7,9-dihydroxy-prostanoic acid*Metabolite
Dinor-4-keto-7,9,13-trihydroxy-prosta-11,12-enoic acid*Metabolite
Docosahexaenoic acid (DHA) (22:6,w3)MetaboliteCHEBI:36005 (ChEBI)
Docosapentaenoic acid (DPA) (22:5,w3)MetaboliteCHEBI:53488 (ChEBI)
E2-IsoKMetaboliteE2-Isoketals
E2-IsoPMetaboliteIso-Prostaglandin E2
EETsPathway
ELOVL2GeneProductENSG00000197977 (Ensembl)
ELOVL5GeneProductENSG00000012660 (Ensembl) fatty acid elongase 5
Eicosadienoic acid (20:2,w6)MetaboliteCHEBI:73731 (ChEBI)
Eicosapentaenoic acid (EPA) (20:5,w3)MetaboliteCHEBI:28364 (ChEBI)
Eicosatetraenoic acid (ETA) (20:4,w3)MetaboliteCHEBI:166893 (ChEBI)
Eicosatrienoic acid (20:3,w3)Metabolite5312529 (PubChem-compound)
ElongaseGeneProduct
Enzymatic Epoxidation
Enzymatic HydrolysisProtein
Enzymatic dehydrogenationGeneProduct
Enzymatic β and w oxidation*
ExcretionPathway
Excretion via urinePathway
FADS1GeneProductENSG00000149485 (Ensembl) Δ5-Desaturase
FADS2GeneProductENSG00000134824 (Ensembl)
FLAPGeneProductENSG00000132965 (Ensembl) gene = ALOX5AP FLAP= 5-lipoxygenase activating protein
FPR2 GeneProductENSG00000171049 (Ensembl) =formyl peptide receptor 2 =ALX
Free radical-catalyzed peroxidation
G2-IsoPMetaboliteIso-Prostaglandin G2
GGT1GeneProductENSG00000100031 (Ensembl)
GGT5GeneProductENSG00000099998 (Ensembl) =gamma-glutamyltransferase 5
GGTGeneProductENSG00000100031 (Ensembl) gamma-glutamyltransferase 1
GPR32GeneProductENSG00000142511 (Ensembl) =G protein-coupled receptor 32 =RVDR1
GPx-4ProteinENSG00000167468 (Ensembl) Glutathione Peroxidase 4
GSTM4s/LTC4sGeneProductENSG00000168765 (Ensembl) glutathione S-transferase mu 4
GiComplex
GqComplex
GsComplexPGI2 binding to the associated IP receptor (coupled to Gs) leads to an activation of the AC and thus to an increase of intracellular cAMP. Its elevation downregulates store-mediated calcium entry, calcium mobilization and secretion, as well as platelet adhesion to subendothelial collagen via integrin α2β1. The cAMP increase further results in an activation of protein kinase-A (PKA) and in principle, in an inhibition of platelet activation. Analogous to cAMP, PKA activity has been associated with a reduced Ca2+ release from intra-platelet stores
H-PGDS GeneProductENSG00000163106 (Ensembl)
H2-IsoPMetaboliteIso-Prostaglandin H2
HETEsPathway
HPGD GeneProductENSG00000164120 (Ensembl) 15-PGDH=15-hydroxy-prostaglandin dehydrogenase
HPGDGeneProductENSG00000164120 (Ensembl)
Hydrolase*GeneProduct
Hydrolysis (Unknown Hydrolase)Protein
Hydrolysis*GeneProduct
IP3ComplexCHEBI:16595 (ChEBI)
Irradiation-induced SenescencePathway
Irradiation-induced Senescence Pathway
Irradiation-induced Senescence Oncogene-induced senescence (RAS)Pathway
IsofuranesPathway
IsoprostanesPathway
J2-IsoPMetaboliteIso-Prostaglandin J2
L-PGDS GeneProductENSG00000107317 (Ensembl)
LGD2MetaboliteCHEBI:34820 (ChEBI) Levuglandin D2
LGE2MetaboliteCHEBI:34821 (ChEBI) Levuglandin E2
LGR6 receptorMetabolite
LTA4MetaboliteCHEBI:15651 (ChEBI)
LTA4HGeneProductENSG00000111144 (Ensembl)
LTB4MetaboliteCHEBI:15647 (ChEBI)
LTC4MetaboliteCHEBI:16978 (ChEBI)
LTC4SGeneProductENSG00000213316 (Ensembl)
LTD4MetaboliteCHEBI:28666 (ChEBI)
LTE4MetaboliteCHEBI:15650 (ChEBI)
Linoleic acid (LA) (18:2,w6)Metabolite17351 (ChEBI) LA (18:2 w6)
LipoxinsPathway
Lipoxins

Eoxins Protectins Resolvins

Maresins		Pathway
MAPK cascadeMetabolite
MCTR1MetaboliteCHEBI:138202 (ChEBI) (13R)-S-glutathionyl-(14S)-hydroxy-(4Z,7Z,9E,11E,16Z,19Z)-docosahexaenoic acid
MCTR2 MetaboliteCHEBI:138206 (ChEBI) (13R)-S-cysteinylglycinyl-(14S)-hydroxy-(4Z,7Z,9E,11E,16Z,19Z)-docosahexaenoic acid
MCTR3 MetaboliteCHEBI:138209 (ChEBI) (13R)-S-cysteinyl-(14S)-hydroxy-(4Z,7Z,9E,11E,16Z,19Z)-docosahexaenoic acid
Maresin 1MetaboliteCHEBI:138249 (ChEBI) 7R,14S-dihydroxy-4Z,8E,10E,12Z,16Z,19Z-docosahexaenoic acid
Maresin 2MetaboliteCHEBI:138248 (ChEBI) (13R,14S)-dihydroxy-(4Z,7Z,9E,11E,16Z,19Z)-docosahexaenoic acid
Membrane phospholipidsMetaboliteCHEBI:16247 (ChEBI)
Mitochondrial dysfunction-associated senescence Oncogene (RAS)-induced senescencePathway
Non-enzymatic
Non-enzymatic degradation
Non-enzymatic HydrolysisProtein
Non-enzymatic dehydration
Non-enzymatic hydrolysis
Non-enzymatic,albumin-mediated degradation
Oncogene (RAS)-induced SenescencePathway
Oncogene(RAS)-induced senescencePathway
Oncogene-induced senescence

DNA damage-induced senescence Oxidative stress-induced senescence Replicative senescence

Irradiation-induced senescence		Pathway
Osbond acid (22:5,w6)MetaboliteCHEBI:65136 (ChEBI) =docosapentaenoic acid (DPAω6, 22:5)
P450GeneProduct
PAI-1ProteinENSG00000106366 (Ensembl) Gene: SERPINE1
PDXMetabolite138653 (ChEBI) (4Z,7Z,10S,11E,13Z,15E,17S,19Z)-10,17-dihydroxydocosahexaenoic acid
PG-9KRGeneProductENSG00000159228 (Ensembl) PG-9KR= Prostaglandin-9-ketoreductase
PGA IsomeraseGeneProduct
PGA1Metabolite14152-28-4 (CAS)
PGA2Metabolite27820 (ChEBI) PGA2=Prostaglandin A2
PGB1MetaboliteCHEBI:27624 (ChEBI)
PGB2Metabolite28099 (ChEBI) PGB2=Prostaglandin B2
PGC IsomeraseGeneProduct
PGC1MetaboliteCHEBI:15546 (ChEBI)
PGC2Metabolite27555 (ChEBI) PGC2=Prostaglandin C2
PGD1Metabolite27696 (ChEBI)
PGD2Metabolite15555 (ChEBI)
PGD3MetaboliteCHEBI:34939 (ChEBI)
PGDSGeneProduct5.3.99.2 (Enzyme Nomenclature)
PGE 19-hydroxylaseGeneProduct
PGE1Metabolite15544 (ChEBI)
PGE2Metabolite15551 (ChEBI)
PGE3MetaboliteCHEBI:28031 (ChEBI)
PGESGeneProduct5.3.99.3 (Enzyme Nomenclature)
PGF1aMetabolite28852 (ChEBI)
PGF3aMetaboliteCHEBI:36075 (ChEBI)
PGFSGeneProduct1.1.1.188 (Enzyme Nomenclature) =Prostaglandin F synthase
PGG1Metabolite133739 (ChEBI)
PGG2Metabolite27647 (ChEBI) Prostaglandin G2 is abbreviated as PGG2
PGG3MetaboliteCHEBI:134406 (ChEBI)
PGH1Metabolite91133 (ChEBI)
PGH2Metabolite15554 (ChEBI) PGH2 is the abbreviation of PGG2
PGH3MetaboliteCHEBI:134407 (ChEBI)
PGI1*Metabolite
PGI2MetaboliteCHEBI:15552 (ChEBI) Synonym for PGI2 is "Prostacyclin"
PGI3Metabolite
PGISGeneProduct5.3.99.4 (Enzyme Nomenclature)
PGJ2Metabolite27485 (ChEBI)
PPARγComplex
PRAK/MAPKAPK5Metabolite
PTGDR2 ComplexENSG00000183134 (Ensembl) =prostaglandin D2 receptor 2 =DP2
PTGDRComplexENSG00000168229 (Ensembl) =prostaglandin D2 receptor =DP1
PTGER1ComplexENSG00000160951 (Ensembl) =prostaglandin E receptor 1 =EP1
PTGER2ComplexENSG00000125384 (Ensembl) =prostaglandin E receptor 2 =EP2
PTGER3 ComplexENSG00000050628 (Ensembl) =prostaglandin E receptor 3 =EP3
PTGER4 ComplexENSG00000171522 (Ensembl) =prostaglandin E receptor 4 =EP4
PTGES GeneProductENSG00000148344 (Ensembl) =microsomal prostaglandin E synthase 1 (mPGES-1)
PTGES2 GeneProductENSG00000148334 (Ensembl) =microsomal prostaglandin E synthase 2 (PTGES2)
PTGES3 GeneProductENSG00000110958 (Ensembl) =prostaglandin E synthase 3 (cPGES)
PTGFR ComplexENSG00000122420 (Ensembl) Prostaglandin F receptor : FP

Activation of FP by PGF2α results in the IP3 and DAG formation as well as in the mobilization of Ca2+.

PTGIRComplexENSG00000160013 (Ensembl) prostaglandin I2 receptor
PTGS1GeneProductENSG00000095303 (Ensembl) =Prostaglandin-endoperoxide synthase 1 =cyclooxygenase (COX)
PTGS2GeneProductAlternatively, RvDs biosynthesis can be initiated by the aspirin-dependent acetylated COX-2 enzyme to give the 17R-series RvDs. In fact, acetylated COX-2 in the presence of aspirin acts as a modified dioxygenase by introducing an oxygen molecule with opposite stereochemistry. The RvDs biosynthesized through aspirin and acetylated COX-2 also undergo lipid oxidation catalysed by 15-LO and 5-LO, epoxidation, and hydrolysis processes, forming AT-RvDs
PTGS2GeneProductENSG00000073756 (Ensembl)
Peroxidase
Peroxidase*GeneProduct
Phospholipase (cPLA2α)GeneProduct
Prostaglandin F synthase
Prostaglandin [c]Metabolite
Prostaglandin [e]Metabolite
Protectin D1Metabolite195348 (ChEBI)
Protectin D2Metabolite
RASMetabolite
RORalphaMetabolite
ROSMetabolite26523 (ChEBI)
Radiation-induced senescencePathway
Radiation-induced senescence Oncogene(RAS)-induced senescencePathway
RbGeneProductENSG00000139687 (Ensembl)
Reduction
Reduction*
Replicative senescence

Radiation-induced senescence Mtochondrial dysfunction-associated senescence

Oncogene-induced senescence		Pathway
RvD1(n-3 DPA)*Metabolite
RvD1MetaboliteCHEBI:81564 (ChEBI)
RvD2(n-3 DPA)*Metabolite
RvD2MetaboliteCHEBI:81565 (ChEBI)
RvD3MetaboliteCHEBI:138648 (ChEBI)
RvD4MetaboliteCHEBI:138649 (ChEBI)
RvD5Metabolite
RvD5(n-3 DPA)*Metabolite
RvD6MetaboliteCHEBI:138643 (ChEBI)
RvE1MetaboliteCHEBI:81559 (ChEBI)
RvE2MetaboliteCHEBI:81560 (ChEBI)
RvE3MetaboliteCHEBI:138542 (ChEBI)
RvE4Metabolite1025684-60-9 (CAS)
RvT1MetaboliteCHEBI:137011 (ChEBI)
RvT2MetaboliteCHEBI:137018 (ChEBI)
RvT3MetaboliteCHEBI:137019 (ChEBI)
RvT4MetaboliteCHEBI:137020 (ChEBI)
SASPPathway
SASPPathwayWP3391 (WikiPathways)
SEH
SIRT1GeneProductENSG00000096717 (Ensembl)
SLCO2A1GeneProductENSG00000174640 (Ensembl)
Senescence phenotypePathway
SenescencePathwayWP615 (WikiPathways)
Spontaneous hydrolysis
Stearidonic acid (SDA) (18:4,w3)MetaboliteCHEBI:32389 (ChEBI)
TBXA2RComplexENSG00000006638 (Ensembl) =thromboxane A2 receptor
TBXAS1GeneProductENSG00000059377 (Ensembl) =CYP5A1
TXASGeneProduct5.3.99.5 (Enzyme Nomenclature)
TxA1*Metabolite
TxA3Metabolite
TxAMetaboliteCHEBI:15627 (ChEBI)
TxB1Metabolite71668258 (PubChem-compound)
TxBMetaboliteCHEBI:28728 (ChEBI)
Unknown
a-Linolenic acid (ALA) (18:3,w3)MetaboliteCHEBI:27432 (ChEBI) IUPAC Name: (9Z,12Z,15Z)-octadeca-9,12,15-trienoic acid
alpha-tetranor-15-keto-13,14-dihydro-8-iso-PGF2a*Metabolite
cAMPMetaboliteCHEBI:17489 (ChEBI) PGI2 binding to the associated IP receptor (coupled to Gs) leads to an activation of the AC and thus to an increase of intracellular cAMP. Its elevation downregulates store-mediated calcium entry, calcium mobilization and secretion, as well as platelet adhesion to subendothelial collagen via integrin α2β1. The cAMP increase further results in an activation of protein kinase-A (PKA) and in principle, in an inhibition of platelet activation. Analogous to cAMP, PKA activity has been associated with a reduced Ca2+ release from intra-platelet stores
elongation

delta6 desaturation

beta-oxidation
epoxide hydrolysis
h15-LOX1Protein
p21GeneProductENSG00000124762 (Ensembl) Gene: CDKN1A
p38 MAPKGeneProductENSG00000185386 (Ensembl)
p53GeneProduct
p53MetaboliteCHEBI:77731 (ChEBI)
p53GeneProductENSG00000141510 (Ensembl)
p53S37Metabolite
w-hydroxylase*
y-linolenic acid (GLA) (18:3,w6)Metabolite28661 (ChEBI) GLA(18:3 w6)
Δ12-PGD2Metabolite
Δ12-PGJ2MetaboliteCHEBI:28130 (ChEBI) Synonym: 9-Deoxy-delta(9,12)-13,14-dihydro PGD2
Δ13-reductaseGeneProduct1.3.1.48 (Enzyme Nomenclature) =15-oxoprostaglandin-Δ13-reductase
Δ6-trans-12-epi-leukotriene B4MetaboliteCHEBI:63982 (ChEBI)
Δ9-Elongase*
β and ω oxidation*
β-oxidase*GeneProduct
β-oxidationComplex
β-oxidation*

Annotated Interactions

No annotated interactions

Retrieved from "https://classic.wikipathways.org/index.php/Pathway:WP5424"
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