WikiPathways

From WikiPathways

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<h2 class="frontPagePanel blueFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:CurrentHighlight | true}}
<h2 class="frontPagePanel blueFg">Today's Featured Pathway</h2>{{ #pathwayOfTheDay: {{LOCALDAYNAME}} {{LOCALDAY}} {{LOCALMONTHNAME}} {{LOCALYEAR}} | Curation:CurrentHighlight | true}}
<h2 class="frontPagePanel blueFg" style="margin-top:0.5em;">Updates</h2>
<h2 class="frontPagePanel blueFg" style="margin-top:0.5em;">Updates</h2>
 +
* '''May 2023 Release''': [[Special:RecentPathwayChanges|316 edits]] by [[WikiPathways:Statistics#Contribution_scores|13 contributors]] and [https://www.wikipathways.org/browse/new.html 15 new pathways].
* '''April 2023 Release''': [[Special:RecentPathwayChanges|276 edits]] by [[WikiPathways:Statistics#Contribution_scores|32 contributors]] and [https://www.wikipathways.org/browse/new.html 6 new pathways].
* '''April 2023 Release''': [[Special:RecentPathwayChanges|276 edits]] by [[WikiPathways:Statistics#Contribution_scores|32 contributors]] and [https://www.wikipathways.org/browse/new.html 6 new pathways].
* '''March 2023 Release''': [[Special:RecentPathwayChanges|293 edits]] by [[WikiPathways:Statistics#Contribution_scores|30 contributors]] and [https://www.wikipathways.org/browse/new.html 22 new pathways].
* '''March 2023 Release''': [[Special:RecentPathwayChanges|293 edits]] by [[WikiPathways:Statistics#Contribution_scores|30 contributors]] and [https://www.wikipathways.org/browse/new.html 22 new pathways].
Line 105: Line 106:
* '''October 2022 Release''': [[Special:RecentPathwayChanges|203 edits]] by [[WikiPathways:Statistics#Contribution_scores|13 contributors]] and [[WikiPathways:NewPathwayReleases#October_2022|6 new pathways]].
* '''October 2022 Release''': [[Special:RecentPathwayChanges|203 edits]] by [[WikiPathways:Statistics#Contribution_scores|13 contributors]] and [[WikiPathways:NewPathwayReleases#October_2022|6 new pathways]].
* '''September 2022 Release''': [[Special:RecentPathwayChanges|243 edits]] by [[WikiPathways:Statistics#Contribution_scores|12 contributors]] and [[WikiPathways:NewPathwayReleases#September_2022|1 new pathway]].
* '''September 2022 Release''': [[Special:RecentPathwayChanges|243 edits]] by [[WikiPathways:Statistics#Contribution_scores|12 contributors]] and [[WikiPathways:NewPathwayReleases#September_2022|1 new pathway]].
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* '''August 2022 Release''': [[Special:RecentPathwayChanges|335 edits]] by [[WikiPathways:Statistics#Contribution_scores|6 contributors]] and [[WikiPathways:NewPathwayReleases#August_2022|11 new pathways]].
 
&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Updates|more...]]
&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Updates|more...]]
<h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='2'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]
<h2 class="frontPagePanel blueFg">Discussions</h2><recentChanges class="blueBg" style="border:none" namespace='90' limit='2'></recentChanges>&nbsp;&nbsp;&nbsp;&nbsp;[[WikiPathways:Discussions|more...]]

Revision as of 21:52, 11 May 2023

Try the New WikiPathways

Visit https://wikipathways.org to see the new version of WikiPathways. This is the "classic" version of WikiPathways will not be maintained for much longer.

Find Pathways

Search

 Browse

Browse by species and category

You can search by:
  • Pathway name (Apoptosis)
  • Gene or protein name (p53)
  • Any page content (cancer)

Get Pathways

Download

Multiple formats and methods

Growth

New pathways added each month

Edit Pathways

Learn

Play with the editor tools

Request

Queue figures for conversion

We want your feedback! A quick survey to help us focus development: https://www.surveymonkey.com/r/wikipathways

Today's Featured Pathway

SARS-CoV-2 and COVID-19 pathway (Homo sapiens)
invalid pathway title: exception 'Exception' with message 'Unable to convert to /var/www/wikipathways/images/d/d6/WP4846_126487.svg:
Status:1
Message:Exception in thread "main" java.lang.NullPointerException at org.pathvisio.core.Engine.getPathwayImporters(Unknown Source) at org.pathvisio.core.Engine.importPathway(Unknown Source) at org.pathvisio.core.util.Converter.main(Unknown Source)


Command:java -Xmx1024M -jar /var/www/wikipathways/wpi/bin/pathvisio_core.jar "/var/www/wikipathways" "/var/www/wikipathways/images/d/d6/WP4846_126487.svg" 2>&1
' in /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php:1255 Stack trace:

  1. 0 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1227): Pathway::convertWithPathVisio(false, '/var/www/wikipa...')
  2. 1 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1137): Pathway->saveConvertedByPathVisioCache('svg')
  3. 2 /var/www/wikipathways/wpi/extensions/Pathways/Pathway.php(1153): Pathway->updateCache('svg')
  4. 3 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(129): Pathway->getImage()
  5. 4 /var/www/wikipathways/wpi/extensions/pathwayThumb.php(53): makeThumbLinkObj(Object(Pathway), 'SARS-CoV-2 and ...', 'https://classic...', 'SARS-CoV-2 and ...', 'center', 'pwthumb', '300')
  6. 5 [internal function]: renderPathwayImage(Object(Parser), 'Pathway:WP4846', '300', 'center', 'SARS-CoV-2 and ...', 'pathway', 'SARS-CoV-2 and ...')
  7. 6 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('renderPathwayIm...', Array)
  8. 7 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPTemplateFrame_DOM))
  9. 8 /var/www/wikipathways/includes/parser/Parser.php(2986): PPFrame_DOM->expand(Object(PPNode_DOM))
  10. 9 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  11. 10 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
  12. 11 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('{{Template:Toda...')
  13. 12 /var/www/wikipathways/includes/parser/Parser.php(439): Parser->internalParse('{{Template:Toda...')
  14. 13 /var/www/wikipathways/wpi/extensions/PathwayOfTheDay/PathwayOfTheDay.php(60): Parser->recursiveTagParse('{{Template:Toda...')
  15. 14 [internal function]: getPathwayOfTheDay(Object(Parser), 'Monday 29 April...', 'Curation:Curren...', 'true')
  16. 15 /var/www/wikipathways/includes/parser/Parser.php(2860): call_user_func_array('getPathwayOfThe...', Array)
  17. 16 /var/www/wikipathways/includes/parser/Preprocessor_DOM.php(915): Parser->braceSubstitution(Array, Object(PPFrame_DOM))
  18. 17 /var/www/wikipathways/includes/parser/Parser.php(2678): PPFrame_DOM->expand(Object(PPNode_DOM), 0)
  19. 18 /var/www/wikipathways/includes/parser/Parser.php(966): Parser->replaceVariables('{| ?<!-- Specia...')
  20. 19 /var/www/wikipathways/includes/parser/Parser.php(321): Parser->internalParse('{| ?<!-- Specia...')
  21. 20 /var/www/wikipathways/includes/OutputPage.php(405): Parser->parse('{| ?<!-- Specia...', Object(Title), Object(ParserOptions), true, true, 126504)
  22. 21 /var/www/wikipathways/includes/OutputPage.php(391): OutputPage->addWikiTextTitle('{| ?<!-- Specia...', Object(Title), true, true)
  23. 22 /var/www/wikipathways/includes/OutputPage.php(500): OutputPage->addWikiTextTitleTidy('{| ?<!-- Specia...', Object(Title), true)
  24. 23 /var/www/wikipathways/includes/DifferenceEngine.php(313): OutputPage->addWikiTextTidy('{| ?<!-- Specia...')
  25. 24 /var/www/wikipathways/includes/DifferenceEngine.php(271): DifferenceEngine->renderNewRevision()
  26. 25 /var/www/wikipathways/includes/Article.php(729): DifferenceEngine->showDiffPage(false)
  27. 26 /var/www/wikipathways/includes/Wiki.php(437): Article->view()
  28. 27 /var/www/wikipathways/includes/Wiki.php(59): MediaWiki->performAction(Object(OutputPage), Object(Article), Object(Title), Object(User), Object(WebRequest))
  29. 28 /var/www/wikipathways/index.php(93): MediaWiki->initialize(Object(Title), Object(Article), Object(OutputPage), Object(User), Object(WebRequest))
  30. 29 {main}

Updates

    more...

Discussions

No recent changes    more...

Forum

        Google group wikipathways-discuss


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